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CMIP6_conf.yaml
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CMIP6_conf.yaml
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################################################################
# USER OPTIONS
# Settings to manage cmorisation and set tables/variables to process
cmor:
# If test true it will just run the setup but not launch the job automatically
test: false
appdir: /g/data/ua8/Working/packages/ACCESS-MOPPeR
# output directory for all generated data (CMORISED files & logs)
# if default it is set to /scratch/$project/$user/MOPPER_OUTPUT<exp>
outpath: default
# if true override files already existing in outpath
override: !!bool true
# location of input data must point to dir above experiment;
# and experiment subdir must contain atmos/[,ocean/, ice/]
datadir: /g/data/...
# from exp_to_process: local name of experiment
exp: expid
# Interval to cmorise inclusive of end_date
# NB this will be used to select input files to include
start_date: "09500101"
end_date: "09501231"
# select one of: [CM2, ESM, OM2[-025]]
access_version: CM2
# reference date for time units (set as 'default' to use START_YEAR)
#reference_date: "0950-01-01"
reference_date: default
# official CMIP6
path_template: "{activity_id}/{source_id}/{experiment_id}/{variant_label}/{table_id}/{variable_id}/{grid_label}/{version}"
file_template: "{variable_id}_{table_id}_{source_id}_{experiment_id}_{variant_label}_{grid_label}"
# maximum file size in MB: this is meant as uncompressed, compression might reduce it by 50%
max_size: 8192
# deflate_level sets the internal compression level,
# level 4-6 good compromise between reducing size and write/read speed
# shuffle 0: off 1:on Shuffle reduces size without impacting speed
# NB make sure this is inline with CMIP requirements
deflate_level: 4
shuffle: 1
# Variables to CMORise:
# CMOR table/variable to process; default is 'all'.
# Or create a yaml file listing variables to process (VAR_SUBSET[_LIST]).
# each line: <table: [var1, var2, var3 ..]>
tables: CMIP6_Amon
variable_to_process: tas
var_subset: !!bool False
var_subset_list: ''
# if subhr data is included specify actual frequency as ##min
subhr: 10min
# model vertical levels number
levnum: 85
# Mappings, vocab and tables settings
# default=data/dreq/cmvme_all_piControl_3_3.csv
dreq: default
force_dreq: !!bool True
dreq_years: !!bool False
# mapping file created with cli_db.py based on the actual model output
master_map: "data/master_cm000.csv"
# use this to indicate the path used for new or modified tables
# these will be used in preference to the package tables
# as you should use official CMOR cmip6 tables for CMIP6 mode
# use this only if current package version is obsolete
tables_path: ""
# ancillary files path
# when running model with payu ancil files are copied to work/<realm>/INPUT
# you can leave these empty if processing only atmos
ancils_path: "data/ancils"
grid_ocean: ""
mask_ocean: ""
grid_ice: ""
land_frac: ""
tile_frac: ""
history_data: ''
# DO NOT REMOVE OR ALTER this if you don't know what you're doing :-)
# defines Controlled Vocabularies and required attributes
_control_vocabulary_file: "CMIP6_CV.json"
_cmip6_option: CMIP6
_AXIS_ENTRY_FILE: CMIP6_coordinate.json
_FORMULA_VAR_FILE: CMIP6_formula_terms.json
grids: CMIP6_grids.json
# Additional NCI information:
# NCI project to charge compute; $PROJECT = your default project
# NCI queue to use; hugemem is recommended
project: v45
# additional NCI projects to be included in the storage flags
addprojs: []
# queue and memory (GB) per CPU (depends on queue)
# hugemem is reccomended for high reoslution data and/or derived variables
# hugemem requires a minimum of 6 cpus this is handled by the code
queue: hugemem
mem_per_cpu: 30
# walltime in "hh:mm:ss"
walltime: '8:00:00'
mode: cmip6
# conda_env: <custom-env-path>/bin/activate
conda_env: default
# Global attributes: these will be added to each files comment unwanted ones
# the labels CMIP6/ACDD indicates which ones are necessary to comply with respective standards
# If CMIP6 for model information use CV vocab
# see data/custom-cmor-tables/Tables/CMIP6_CV.json
attrs:
# contact email of person running post-processing
# if following ACDD this is
contact: ..@..
# CMIP attribute refer to CMIP6 CV
institution_id: CSIRO-ARCCSS
institution: "CSIRO (Commonwealth Scientific and Industrial Research Organisation, Aspendale, Victoria 3195, Australia), ARCCSS (Australian Research Council Centre of Excellence for Climate System Science)"
# use this license for CMIP6
license: "CMIP6 model data produced by CSIRO is licensed under a Creative Commons Attribution-ShareAlike 4.0 International License (https://creativecommons.org/licenses/). Consult https://pcmdi.llnl.gov/CMIP6/TermsOfUse for terms of use governing CMIP6 output, including citation requirements and proper acknowledgment. Further information about this data, including some limitations, can be found via the further_info_url (recorded as a global attribute in this file). The data producers and data providers make no warranty, either express or implied, including, but not limited to, warranties of merchantability and fitness for a particular purpose. All liabilities arising from the supply of the information (including any liability arising in negligence) are excluded to the fullest extent permitted by law."
# Please provide a short description of the experiment.
# For those created from the p73 archive, it's ok to just link
# to the Archive Wiki.
exp_description: "CSIRO ACCESS-CM2 model output prepared for Pacemaker piControl experiment"
# All following attributes are requried by CMIP6, some of them don't have meaning outside of CMIP6 context
experiment_id: piControl # standard experiment name (e.g. piControl)
activity_id: CMIP # activity/MIP name (e.g. CMIP)
mip_era: CMIP6
realization_index: 1 # "r1"[i1p1f1] (e.g. 1)
initialization_index: 1 # [r1]"i1"[p1f1] (e.g. 1)
physics_index: 1 # [r1i1]"p1"[f1] (e.g. 1)
forcing_index: 1 # [r1i1p1]"f1" (e.g. 1)
variant_label: r1i1p1f1
source_type: AOGCM
# NB source and source_id need to be defined in official CMIP6_CV.json
# currently available: ACCESS-ESM1-5, ACCESS-CM2,
# ACCESS-OM2, ACCESS-OM2-025
source_id: ACCESS-CM2
# ACCESS-CM2 description
source: "ACCESS-CM2 (2019): aerosol: UKCA-GLOMAP-mode, atmos: MetUM-HadGEM3-GA7.1 (N96; 192 x 144 longitude/latitude; 85 levels; top level 85 km), atmosChem: none, land: CABLE2.5, landIce: none, ocean: ACCESS-OM2 (GFDL-MOM5, tripolar primarily 1deg; 360 x 300 longitude/latitude; 50 levels; top grid cell 0-10 m), ocnBgchem: none, seaIce: CICE5.1.2 (same grid as ocean)"
# ACCESS-ESM1.5 description
#source: "ACCESS-ESM1.5 (2019): aerosol: CLASSIC (v1.0), atmos: HadGAM2 (r1.1, N96; 192 x 145 longitude/latitude; 38 levels; top level 39255 m), atmosChem: none, land: CABLE2.4, landIce: none, ocean: ACCESS-OM2 (MOM5, tripolar primarily 1deg; 360 x 300 longitude/latitude; 50 levels; top grid cell 0-10 m), ocnBgchem: WOMBAT (same grid as ocean), seaIce: CICE4.1 (same grid as ocean)"
# specifies the difference between the time units base and the first internal year (e.g. 365D0)
run_variant: "forcing: GHG, Oz, SA, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFC11, CFC12, CFC113, HCFC22, HFC125, HFC134a)"
calendar: "proleptic_gregorian"
grid: "native atmosphere N96 grid (144x192 latxlon)"
grid_label: "gn"
nominal_resolution: "250 km"
version: "v20220426"
# Parent experiment details:
# if parent=false, all parent fields are automatically set to "no parent".
# If true, defined values are used.
#
parent: !!bool false
# experiment name of the parent (e.g. piControl-spinup)
parent_experiment_id: none
# activity/MIP name of the parent (e.g. CMIP)
parent_activity_id:
# activity/MIP name of the parent (e.g. CMIP)
parent_mip_era:
parent_source_id:
# time units of the parent (e.g. "days since 0001-01-01")
parent_time_units:
# variable label of the parent (e.g. r1i1p1f1)
parent_variant_label:
# internal time of the child at which the branching occured (e.g. 0D0)
branch_time_in_child: 0D0
# internal time of the parent at which the branching occured (e.g. 0D0)
branch_time_in_parent: 0D0
branch_method: standard
sub_experiment: none
sub_experiment_id: none
# DO NOT REMOVE OR ALTER this if you don't know what you're doing :-)
#CMOR will add a tracking_id if you want to define a prefix add here
tracking_id_prefix:
Conventions: "CF-1.7 CMIP-6.2"
comment: "post-processed using ACCESS-MOPPeR v1.0.0 https://doi.org/10.5281/zenodo.12747219"