Build failes because of missing dependency: HDF5

[haesleinhuepf]

Hey guys,

I'm trying to build the library and it fails because of a missing dependency. Could you please tell me where I can get this from? It's a native cpp library, or?

You find the detailed log below. Furthermore, apparently I was lucky because I do have CMake, Visual Studio and friends installed. However, may there be other software necessary to build LibAPR and friends?

Thanks!

Cheers,
Robert

"C:\Program Files\Java\jdk1.8.0_161\bin\java.exe" -Dmaven.multiModuleProjectDirectory=C:\structure\code\LibAPR-java-wrapper "-Dmaven.home=C:\Program Files\JetBrains\IntelliJ IDEA Community Edition 2018.2.4\plugins\maven\lib\maven3" "-Dclassworlds.conf=C:\Program Files\JetBrains\IntelliJ IDEA Community Edition 2018.2.4\plugins\maven\lib\maven3\bin\m2.conf" "-javaagent:C:\Program Files\JetBrains\IntelliJ IDEA Community Edition 2018.2.4\lib\idea_rt.jar=58143:C:\Program Files\JetBrains\IntelliJ IDEA Community Edition 2018.2.4\bin" -Dfile.encoding=UTF-8 -classpath "C:\Program Files\JetBrains\IntelliJ IDEA Community Edition 2018.2.4\plugins\maven\lib\maven3\boot\plexus-classworlds-2.5.2.jar" org.codehaus.classworlds.Launcher -Didea.version=2018.2.4 -Denforcer.skip -Dmaven.test.skip=true clean install
[INFO] Scanning for projects...
[INFO] ------------------------------------------------------------------------
[INFO] Detecting the operating system and CPU architecture
[INFO] ------------------------------------------------------------------------
[INFO] os.detected.name: windows
[INFO] os.detected.arch: x86_64
[INFO] os.detected.version: 10.0
[INFO] os.detected.version.major: 10
[INFO] os.detected.version.minor: 0
[INFO] os.detected.classifier: windows-x86_64
[INFO]                                                                         
[INFO] ------------------------------------------------------------------------
[INFO] Building Java wrapper for LibAPR 0.1.0-SNAPSHOT
[INFO] ------------------------------------------------------------------------
[INFO] 
[INFO] --- maven-clean-plugin:2.5:clean (default-clean) @ libapr-java-wrapper ---
[INFO] 
[INFO] --- exec-maven-plugin:1.6.0:exec (cppbuild) @ libapr-java-wrapper ---
Installing "LibAPR"
/c/structure/code/LibAPR-java-wrapper/native/LibAPR/build /c/structure/code/LibAPR-java-wrapper/native
-- Building for: Visual Studio 15 2017
-- The C compiler identification is MSVC 19.14.26428.1
-- The CXX compiler identification is MSVC 19.14.26428.1
-- Check for working C compiler: C:/Program Files (x86)/Microsoft Visual Studio/2017/Community/VC/Tools/MSVC/14.14.26428/bin/Hostx86/x86/cl.exe
-- Check for working C compiler: C:/Program Files (x86)/Microsoft Visual Studio/2017/Community/VC/Tools/MSVC/14.14.26428/bin/Hostx86/x86/cl.exe -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working CXX compiler: C:/Program Files (x86)/Microsoft Visual Studio/2017/Community/VC/Tools/MSVC/14.14.26428/bin/Hostx86/x86/cl.exe
-- Check for working CXX compiler: C:/Program Files (x86)/Microsoft Visual Studio/2017/Community/VC/Tools/MSVC/14.14.26428/bin/Hostx86/x86/cl.exe -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
Configuring for APR version: 1.1.0
-- Unable to determine HDF5 C flags from HDF5 wrapper.
-- Unable to determine HDF5 C version from HDF5 wrapper.
CMake Error at C:/programs/Octave/Octave-4.2.2/share/cmake-3.10/Modules/FindPackageHandleStandardArgs.cmake:137 (message):
  Could NOT find HDF5 (missing: HDF5_LIBRARIES) (found version "1.8.14")
Call Stack (most recent call first):
  C:/programs/Octave/Octave-4.2.2/share/cmake-3.10/Modules/FindPackageHandleStandardArgs.cmake:378 (_FPHSA_FAILURE_MESSAGE)
  C:/programs/Octave/Octave-4.2.2/share/cmake-3.10/Modules/FindHDF5.cmake:905 (find_package_handle_standard_args)
  CMakeLists.txt:61 (find_package)


-- Configuring incomplete, errors occurred!
See also "C:/structure/code/LibAPR-java-wrapper/native/LibAPR/build/CMakeFiles/CMakeOutput.log".
[ERROR] Command execution failed.
org.apache.commons.exec.ExecuteException: Process exited with an error: 1 (Exit value: 1)
	at org.apache.commons.exec.DefaultExecutor.executeInternal(DefaultExecutor.java:404)
	at org.apache.commons.exec.DefaultExecutor.execute(DefaultExecutor.java:166)
	at org.codehaus.mojo.exec.ExecMojo.executeCommandLine(ExecMojo.java:804)
	at org.codehaus.mojo.exec.ExecMojo.executeCommandLine(ExecMojo.java:751)
	at org.codehaus.mojo.exec.ExecMojo.execute(ExecMojo.java:313)
	at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
	at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:207)
	at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:153)
	at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:145)
	at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:116)
	at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:80)
	at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
	at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
	at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:307)
	at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:193)
	at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:106)
	at org.apache.maven.cli.MavenCli.execute(MavenCli.java:863)
	at org.apache.maven.cli.MavenCli.doMain(MavenCli.java:288)
	at org.apache.maven.cli.MavenCli.main(MavenCli.java:199)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.lang.reflect.Method.invoke(Method.java:498)
	at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
	at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
	at org.codehaus.plexus.classworlds.launcher.Launcher.mainWithExitCode(Launcher.java:415)
	at org.codehaus.plexus.classworlds.launcher.Launcher.main(Launcher.java:356)
	at org.codehaus.classworlds.Launcher.main(Launcher.java:47)
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 18.178 s
[INFO] Finished at: 2019-03-10T12:11:02+01:00
[INFO] Final Memory: 9M/243M
[INFO] ------------------------------------------------------------------------
[ERROR] Failed to execute goal org.codehaus.mojo:exec-maven-plugin:1.6.0:exec (cppbuild) on project libapr-java-wrapper: Command execution failed. Process exited with an error: 1 (Exit value: 1) -> [Help 1]
[ERROR] 
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR] 
[ERROR] For more information about the errors and possible solutions, please read the following articles:
[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoExecutionException

Process finished with exit code 1

[krzysg]

Hi, we are using the most known and supported distribution of HDF5 (link). The other library that is used and should be installed in the system is libtiff but this should be already there.
Please let us know if installing HDF5 helped.

EDIT: Currently we are building and developing it under Linux and MacOS. But should not be any differences on Windows. As soon as LibAPR itself builds the rest should be smooth - @skalarproduktraum was using LibAPR in Windows env. so at least we know it is possible :-)

[haesleinhuepf]

Hey @krzysg ,

thanks for answering so fast - on a Sunday! :-)

I'll see if I can build now...

Cheers,
Fobert