circle.yml

machine:
  environment:
    SPM_DIR: /home/ubuntu/opt/spm8/spm8_mcr/spm8
    SPM_MCR: /home/ubuntu/opt/spm8/spm8.sh

dependencies:
  cache_directories:
    - "~/opt/spm8"
    - "~/nilearn_data"

  pre:
    # Installing dependencies for SPM and MCR
    - sudo apt-get update
    - sudo apt-get install libxp6 libxpm4 libxmu6 libxt6 bc
    # Installing SPM
    - source continuous_integration/setup_spm.sh
    # Installing Pypreprocess dependencies
    - pip install --upgrade pip
    - pip install scipy sklearn nibabel configobj nose coverage 
    - pip install matplotlib pandas nipype nilearn

  override:
    # Installing pypreprocess
    - pip install -e .
    # Fetching Auditory and Multimodal datasets in order to be cached in the future
    - python -c "from pypreprocess import datasets; datasets.fetch_spm_auditory(); datasets.fetch_spm_multimodal_fmri(); datasets.fetch_fsl_feeds()"
    # Caching terminates here. Outputs from test won't be saved. 

test:
  override:
    - make clean
    - make test-code
    - cd examples/easy_start && python nipype_preproc_spm_auditory.py
    - cd examples/pipelining && python nipype_preproc_spm_multimodal_faces.py
    - cd examples/pipelining && python nistats_glm_fsl_feeds_fmri.py
    - sh continuous_integration/clean_output.sh

general:
  artifacts:
    - "/home/ubuntu/nilearn_data/spm_auditory/pypreprocess_output/"
    - "~/nilearn_data/spm_multimodal_fmri/pypreprocess_output/"
    - "~/nilearn_data/fsl_feeds/pypreprocess_output/"