-
Notifications
You must be signed in to change notification settings - Fork 151
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Add unit test for VBN metadata LIMS queries #2408
Comments
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
PR #2407 adds a lot of methods that do some simple (if verbose) lims queries. These queries can be found in
(assuming that organization persists beyond code review). Those queries are currently untested. It should be straightforward to write unit tests of these methods using
sqlite3
to mock LIMS and MTRAIN during testing. It just requires personnel hours.Tasks
sqlite3
(or something similar) to create a small test database with known structure that mocks LIMS and MTRAIN. Make sure that the LIMS query methods return the correct relationships between sessions, probes, and units.The text was updated successfully, but these errors were encountered: