Code

Miniature analysis: PSX#1468

Code

Merged

t-b merged 68 commits intomainAllenInstitute/MIES:mainfrom feature/1468-sweepformula-epspAllenInstitute/MIES:feature/1468-sweepformula-epspCopy head branch name to clipboardAug 4, 2023

+9,281-60

Commits

Commits on Aug 4, 2023

• Packages/MIES/DC_proc.ipf: Add code from Travis

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• Packages/MIES/DC_proc.ipf: Add comments

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• Packages/MIES/DC_proc.ipf: Add a RunAll function and make it work

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• DC_proc.ipf: Remove it again

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• PSP/PSC: Miniature analysis package for SweepFormula

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• SFH_GetArgumentAsText: Fix comment

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• SFH_GetSweepsForFormula/SFH_ParseToSelectDataWaveAndRange: Support epoch names in SF_META_RANGE as well

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• SweepFormulaHelp.ifn: Add psx/psxKernel/psxStats/psxPrep/psxRiseTime

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• SweepFormula_PSX.rst/SweepFormula.rst: Add documentation for psx/psxKernel/psxStats/psxPrep/psxRiseTime

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• MIES_SweepFormula_PSX.ipf: Add hint for keyboard control UI

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• Prefer SFH_ResultTypeToString over open coding it

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• PSX_StoreEventWave: Name the results wave entry better

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• SFH_FormatResultsKey: Introduce it

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• MIES_SweepFormula_PSX.ipf: Add fitting of the average

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• MIES_SweepFormula_PSX.ipf: Allow to restrict the number of displayed events in the all events plot

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• PSX_OperationStatsImpl: Avoid histogram wave explosion

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• MIES_SweepFormula_PSX.ipf: Make accepted average fitting function configurable

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• MIES_SweepFormula_PSX.ipf: Adapt intermediate storage handling

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• PSX_AnalyzePeaks: Calculate i_amp also for the first event

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• PSX_GetEventFitRange: Adapt the returned range

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• PSX_FitEventDecay: Add an upper limit for the maximum tau

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• PSX_AnalyzePeaks: Remove pointless writing into h_time

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• PSX_AnalyzePeaks: Remove h_time

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• SweepFormula: Support textual waves for SF_META_XVALUES

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• psxStats: Convert avg post processing to stats

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• Tests/GetMiesMacrosWithPanelType: Skip PSXPanel

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• PSX_OperationStatsImpl: Rethink xinterval output

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• PSX: Fix failing TestBlockIndexLogic test

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• PSX_OperationStatsImpl: Rework all event handling

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• PSX: Fix mouse movement in stats plot

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• PSX_UpdateSingleEventGraph: Always show the fit

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• PSX_UpdateSingleEventTextbox: Keep the current legend position

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• SF_FormulaPlotter: Allow multiple 1D plots with the same category axis

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• PSX_FitEventDecay: Add assertion

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• BetweenZeroAndOne/BetweenZeroAndOneExc: Add helpers

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• Add UpperCaseFirstChar with tests

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• PSX_UpdateSingleEventTextbox: Output fit result as well

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• PSX_PlotInteractionHook: Output fit range with debugging enabled

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• PSX: Make single event offset normalization configurable

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• Sweepformula/psx: Add rise time

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• SF_FormulaPlotter: Add support for custom legends

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• SF_FormulaPlotter: Always set the trace color

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• Add IsValidTraceDisplayMode and add constants for ModifyGraph mode=XXX

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• SF_FormulaPlotter: Don't force markers with custom markers wave

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• SF_FormulaPlotter: Allow setting the trace display mode by the operation

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• PSX_OperationPrep: Add it with tests

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• PSX_UpdateSingleEventGraph: Output debug info

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• PSX_ButtonProc_LoadEvents: Complain nicely for non-existing results data

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• PSX: Add test for store/load and initial psxEvent fetching

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• ApplyMacroToExistingPanel: Avoid hardcoded line numbers

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• PSX: Make querying the results wave more robust

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• PSX: Rename dimension labels for psxEvent

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• PSX_UpdateSingleEventTextbox: Add unit in square brackets for all properties

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• PSX: Fix initial single event fit display

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• json_functions.ipf: Update to version 875

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• Tests/TestWaveNoteFromJSON: Modernize

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• JWN_SetWaveNoteFromJSON: Add release parameter

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• PSX_OperationImpl: Make the operation parameter available earlier

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• PSX_GetEventFitRange: Revise fit range calculation

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• MoveFreeWaveToPermanent: Add it

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• SF_FormulaPlotter: Add support for custom x tick positions and labels

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• SF_FormulaPlotter: Fix derived unique wave name for custom markers

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• SF_FormulaPlotter: Prefer MoveFreeWaveToPermanent

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• psxStats: Add nonfinite as postprocessing option

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• PSX_MouseEventSelection: Add support for psxStats with non-finite postprocessing

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• PSX_OperationPrep: Factor out peak threshold calculation

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• PSX_AnalyzePeaks/PSX_Analysis: Drop unused index argument

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• PSX_Operation: Replace peakThresh parameter by numSDs

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