diff --git a/Dockerfile b/Dockerfile index 8a03bea..edaba0e 100644 --- a/Dockerfile +++ b/Dockerfile @@ -38,7 +38,7 @@ RUN apt-get update && apt-get upgrade -y \ && rm -rf /var/lib/apt/lists/* /tmp/* /var/tmp/* \ && localedef -i en_US -c -f UTF-8 -A /usr/share/locale/locale.alias en_US.UTF-8 -##### INSTALL MAMBA + BUILD MAIN CONDA ENV ##### +##### INSTALL MAMBA + BUILD CONDA ENV ##### RUN \ conda install mamba -c conda-forge --yes \ && mamba env create --file environment.yml \ @@ -53,7 +53,6 @@ RUN \ -I /opt/conda/envs/warlock/include \ -lm -##### GENERATE INTERNAL ENVS & INSTALL DEPS ##### +##### INSTALL DEMONANALYSIS ##### RUN \ - chmod +x prepare-environments.sh \ - && bash -c 'CONDA_PREFIX="/opt/conda/envs/warlock" ./prepare-environments.sh' \ No newline at end of file + bash -c "/opt/conda/envs/warlock/bin/Rscript -e \"devtools::install('resources/demonanalysis', upgrade=FALSE)\"" \ No newline at end of file