cartography_dev.yml

channels:
  - conda-forge
  - bioconda
  - defaults
dependencies:
  - biopython=1.81
  - bioservices=1.11.2
  - blast=2.14.0
  - foldseek=6.29e2557
  - ipython=8.13.2
  - jupyter=1.0.0
  - jupyter-dash=0.4.2
  - leidenalg=0.9.1
  - mamba=1.4.2
  - nltk=3.8.1
  - numpy=1.23.5
  - pandas=2.0.1
  - pip=23.2.1
  - plotly=5.14.1
  - pre-commit=3.5.0
  - python=3.9.16
  - pytest=7.4.3
  - pytorch=2.1.0
  - requests=2.31.0
  - ruff=0.1.6
  - scanpy=1.9.6
  - scikit-learn=1.3.2
  - scipy=1.11.4
  - umap-learn=0.5.3
  - seaborn=0.12.2
  - snakefmt=0.8.5
  - snakemake-minimal=7.25.3
  - tqdm=4.65.0
  - wordcloud=1.9.2

  - pip:
      - "git+https://github.com/Arcadia-Science/arcadia-pycolor.git@245ad0c#egg=arcadia_pycolor"