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I meant actual parallelism in the compiler, not just when compiling multiple files... I think this is doable, but it's major surgery so nothing urgent...
The one option I can think of without major surgery is a total hack. Namely just split the sequences into N chucks on the front end, compile with N threads and manually stitch the compiled sequences .h5 file back together on the back end. I have faith we can engineer a more elegant solution.
Work out a strategy for parallel compilation of sequence lists.
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