dcc-redwood-compose

ICGC Storage System Adapted for UCSC in Docker Compose

Deprecated

Use dcc-ops instead.

Overview

This project runs the Redwood storage-server, metadata-server, and auth-server (closely based off of ICGC's storage system servers) as well as the MongoDB and PostgreSQL databases that the servers require.

Run the System for Development

You'll need maven (3.2.5), docker, and docker-compose installed.

This project composes the two requisite databases and the ucsc-storage-server, ucsc-metadata-server, and ucsc-auth-server Docker images into a 5-container docker-compose setup.The ucsc-*-server images should be built on the current machine. To build them, clone the dcc-storage, dcc-metadata, and dcc-auth repositories and run the following from a directory containing dcc-storage, dcc-metadata, and dcc-auth:

cd dcc-storage && ./mvnw && tar xvf dcc-storage-server/target/*-dist.tar.gz && docker build -t redwood-storage-server dcc-storage-server-*-SNAPSHOT; rm -r dcc-storage-*-SNAPSHOT; cd ..
cd dcc-metadata && ./mvnw && tar xvf dcc-metadata-server/target/*-dist.tar.gz && docker build -t redwood-metadata-server dcc-metadata-server-*-SNAPSHOT; rm -r dcc-metadata-*-SNAPSHOT; cd ..
cd dcc-auth && ./mvnw && tar xvf dcc-auth-server/target/*-dist.tar.gz && docker build -t redwood-auth-server dcc-auth-server-*-SNAPSHOT; rm -r dcc-auth-*-SNAPSHOT; cd ..

Then you can start the system with: docker-compose up and stop it with docker-compose down.

Note: A ~/.aws/credentials file is assumed by docker-compose.yml to exist on the host.