docker-compose.yml

# Modified copy of the rocker/shiny compose template:
# https://github.com/rocker-org/shiny/blob/master/docker-compose.yml

version: "3.0"

services:
  phytofit:
    container_name: phytofit
    # To build the image locally, comment out "image" below, and uncomment
    # "build" and the lines indented under it.
    # image: rocker/shiny
    image: cioosatlantic/phytofit
    # build:
    #  context: .
    #  dockerfile: Dockerfile
    restart: always
    # Setting this to something other than 'root' will cause shiny apps not to
    # run on the localhost:80 "Welcome to Shiny" diagnostics page mentioned
    # below.
    user: 'root'
    # Uncomment the lines below to disable application logs STDOUT output
    # environment:
    #   - APPLICATION_LOGS_TO_STDOUT=false
    ports:
    #  - '80:3838'
      - 0.0.0.0:3838:3838
    #   - "0.0.0.0:7520:7520"
    volumes:
      - "./shiny_logs:/var/log/shiny-server"
      # - "./data:/data"
      - "./data:/srv/shiny-server/phytofit/data"
      # Comment the line below out for initial testing. With it commented out,
      # going to localhost:80 in one's web browser will show a "Welcome to
      # Shiny Server!" diagnostics page.
      # - './mountpoints/apps:/srv/shiny-server'

  data_download:
    depends_on:
      - phytofit
    image: cioosatlantic/phytofit
    command: >
      /bin/sh -c '
      cd /srv/shiny-server/phytofit && yes | Rscript 00_download_new_datasets.R
      '
    volumes:
      - "./data:/srv/shiny-server/phytofit/data"

  data_update:
    depends_on:
      - phytofit
    image: cioosatlantic/phytofit
    command: >
      /bin/sh -c '
      cd /srv/shiny-server/phytofit && yes | Rscript 00_update_datasets.R
      '
    volumes:
      - "./data:/srv/shiny-server/phytofit/data"

volumes:
  shiny_logs:
  data: