{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":606686468,"defaultBranch":"main","name":"fuse-drug","ownerLogin":"BiomedSciAI","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2023-02-26T08:49:11.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/108874137?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1725541107.0","currentOid":""},"activityList":{"items":[{"before":"3c794c5e64dd41af74f7b2f89bc4a97c308a21ad","after":"efa808406d71bcea795721ad897d2c1fca8134e2","ref":"refs/heads/PPI_t5","pushedAt":"2024-09-25T10:18:26.000Z","pushType":"push","commitsCount":4,"pusher":{"login":"floccinauc","name":null,"path":"/floccinauc","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/92428874?s=80&v=4"},"commit":{"message":"Merge branch 'main' of https://github.com/BiomedSciAI/fuse-drug into PPI_t5","shortMessageHtmlLink":"Merge branch 'main' of https://github.com/BiomedSciAI/fuse-drug into …"}},{"before":"7241dc19a8827b2835e4c555155c4401698ee4c0","after":"8586a49c805354ddbb0675bd5d291d27c5cbd1de","ref":"refs/heads/yoels","pushedAt":"2024-09-20T19:53:04.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"YoelShoshan","name":null,"path":"/YoelShoshan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7043815?s=80&v=4"},"commit":{"message":"proper default b_factors shape when it's not provided","shortMessageHtmlLink":"proper default b_factors shape when it's not provided"}},{"before":"8340e920e3366e5bcd3c2aa3f377788b1d3942c3","after":"574a1fa07f17643a0884a8f41fb30874e9b9b251","ref":"refs/heads/main","pushedAt":"2024-09-10T10:03:36.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"simona-rc","name":null,"path":"/simona-rc","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/86354397?s=80&v=4"},"commit":{"message":"Adding special tokens for MoleculeNet ClinTox, BBBP, HIV (#142)\n\nCo-authored-by: Simona Rabinovici-Cohen ","shortMessageHtmlLink":"Adding special tokens for MoleculeNet ClinTox, BBBP, HIV (#142)"}},{"before":"dced5bc4631c923959585cf94af40e62a03ebe4e","after":"f1be0cf40383dd9c02a54f084ae08eb09a75f942","ref":"refs/heads/modular_tokenizer_refactor","pushedAt":"2024-09-09T11:29:34.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mosheraboh","name":"Moshiko Raboh","path":"/mosheraboh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/86309179?s=80&v=4"},"commit":{"message":"..","shortMessageHtmlLink":".."}},{"before":"6854c57c5e82feff2211ceeec13cee26f0f94d9e","after":"2340e5e4b2531848c7cbe44e7f21a7459ab8c30b","ref":"refs/heads/small_mol","pushedAt":"2024-09-08T17:42:25.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"simona-rc","name":null,"path":"/simona-rc","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/86354397?s=80&v=4"},"commit":{"message":"cleanup with flake8","shortMessageHtmlLink":"cleanup with flake8"}},{"before":"b5d59b95a34f23df608e49f6330c05a4c2debe1d","after":"6854c57c5e82feff2211ceeec13cee26f0f94d9e","ref":"refs/heads/small_mol","pushedAt":"2024-09-08T17:15:31.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"simona-rc","name":null,"path":"/simona-rc","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/86354397?s=80&v=4"},"commit":{"message":"cleanup with flake8 and black","shortMessageHtmlLink":"cleanup with flake8 and black"}},{"before":"15e1f848d4fdd79e4ae259fb2685636aa65ed0f1","after":"dced5bc4631c923959585cf94af40e62a03ebe4e","ref":"refs/heads/modular_tokenizer_refactor","pushedAt":"2024-09-08T07:25:34.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mosheraboh","name":"Moshiko Raboh","path":"/mosheraboh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/86309179?s=80&v=4"},"commit":{"message":"Update fusedrug/data/tokenizer/modulartokenizer/README.md\n\nCo-authored-by: Matan Ninio ","shortMessageHtmlLink":"Update fusedrug/data/tokenizer/modulartokenizer/README.md"}},{"before":null,"after":"b5d59b95a34f23df608e49f6330c05a4c2debe1d","ref":"refs/heads/small_mol","pushedAt":"2024-09-05T12:58:27.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"simona-rc","name":null,"path":"/simona-rc","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/86354397?s=80&v=4"},"commit":{"message":"Adding special tokens for MoleculeNet ClinTox, BBBP, HIV","shortMessageHtmlLink":"Adding special tokens for MoleculeNet ClinTox, BBBP, HIV"}},{"before":"b02c573a72b61c1a85d0503ba4b699c0aa3e752e","after":"15e1f848d4fdd79e4ae259fb2685636aa65ed0f1","ref":"refs/heads/modular_tokenizer_refactor","pushedAt":"2024-09-04T13:20:28.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mosheraboh","name":"Moshiko Raboh","path":"/mosheraboh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/86309179?s=80&v=4"},"commit":{"message":"..","shortMessageHtmlLink":".."}},{"before":"8d7192cd0955741351c88e7a0c1319274cf1218b","after":"b02c573a72b61c1a85d0503ba4b699c0aa3e752e","ref":"refs/heads/modular_tokenizer_refactor","pushedAt":"2024-09-04T12:56:57.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mosheraboh","name":"Moshiko Raboh","path":"/mosheraboh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/86309179?s=80&v=4"},"commit":{"message":"..","shortMessageHtmlLink":".."}},{"before":"c707b1198b02ee4716a47e542cc17870d2d0eb46","after":"8d7192cd0955741351c88e7a0c1319274cf1218b","ref":"refs/heads/modular_tokenizer_refactor","pushedAt":"2024-09-04T10:29:19.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mosheraboh","name":"Moshiko Raboh","path":"/mosheraboh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/86309179?s=80&v=4"},"commit":{"message":"refactor injector tokenizer","shortMessageHtmlLink":"refactor injector tokenizer"}},{"before":"0a16c04c2d28e99b4aa9c5dfcbb7b69eadfeb7c7","after":"c707b1198b02ee4716a47e542cc17870d2d0eb46","ref":"refs/heads/modular_tokenizer_refactor","pushedAt":"2024-09-03T11:57:35.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mosheraboh","name":"Moshiko Raboh","path":"/mosheraboh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/86309179?s=80&v=4"},"commit":{"message":"..","shortMessageHtmlLink":".."}},{"before":"f84a44f26c33a4a109cf8571e624b527c0a14e8b","after":"0a16c04c2d28e99b4aa9c5dfcbb7b69eadfeb7c7","ref":"refs/heads/modular_tokenizer_refactor","pushedAt":"2024-09-03T09:46:21.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mosheraboh","name":"Moshiko Raboh","path":"/mosheraboh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/86309179?s=80&v=4"},"commit":{"message":"..","shortMessageHtmlLink":".."}},{"before":"de0c0f9d26e46e6ce74fb23ca2b08bbbc0869439","after":"f84a44f26c33a4a109cf8571e624b527c0a14e8b","ref":"refs/heads/modular_tokenizer_refactor","pushedAt":"2024-09-03T08:51:40.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mosheraboh","name":"Moshiko Raboh","path":"/mosheraboh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/86309179?s=80&v=4"},"commit":{"message":"..","shortMessageHtmlLink":".."}},{"before":"d73774f1d9d7dc79db4b6ce3e853b8fffc38e6de","after":"b0114f4afc5846ce8e5e87f39b77aa33766eb419","ref":"refs/heads/sagi/debug_cicd","pushedAt":"2024-09-03T08:29:32.000Z","pushType":"push","commitsCount":11,"pusher":{"login":"SagiPolaczek","name":"Sagi Polaczek","path":"/SagiPolaczek","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56922146?s=80&v=4"},"commit":{"message":"Merge branch 'modular_tokenizer_refactor' into sagi/debug_cicd","shortMessageHtmlLink":"Merge branch 'modular_tokenizer_refactor' into sagi/debug_cicd"}},{"before":"965588c0ce5901e031517c9a7ea6ca891ad8fc2c","after":"de0c0f9d26e46e6ce74fb23ca2b08bbbc0869439","ref":"refs/heads/modular_tokenizer_refactor","pushedAt":"2024-09-03T08:20:13.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mosheraboh","name":"Moshiko Raboh","path":"/mosheraboh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/86309179?s=80&v=4"},"commit":{"message":"..","shortMessageHtmlLink":".."}},{"before":"61844f5734e7bf5db966d0dbbf8051aa108157bd","after":"d73774f1d9d7dc79db4b6ce3e853b8fffc38e6de","ref":"refs/heads/sagi/debug_cicd","pushedAt":"2024-09-03T08:03:55.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"SagiPolaczek","name":"Sagi Polaczek","path":"/SagiPolaczek","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56922146?s=80&v=4"},"commit":{"message":"arranged better the diff + adding comments for some changes","shortMessageHtmlLink":"arranged better the diff + adding comments for some changes"}},{"before":"0ca43fc422a2cca36ecd7cbd7a5668bcaa2cb234","after":"61844f5734e7bf5db966d0dbbf8051aa108157bd","ref":"refs/heads/sagi/debug_cicd","pushedAt":"2024-09-02T14:39:39.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"SagiPolaczek","name":"Sagi Polaczek","path":"/SagiPolaczek","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56922146?s=80&v=4"},"commit":{"message":"last try. removing dgl","shortMessageHtmlLink":"last try. removing dgl"}},{"before":"8bd8226bb0524b41fb753f0a43cbecc4af4caeb5","after":"0ca43fc422a2cca36ecd7cbd7a5668bcaa2cb234","ref":"refs/heads/sagi/debug_cicd","pushedAt":"2024-09-02T14:05:55.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"SagiPolaczek","name":"Sagi Polaczek","path":"/SagiPolaczek","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56922146?s=80&v=4"},"commit":{"message":"last try. removing dgl","shortMessageHtmlLink":"last try. removing dgl"}},{"before":"2f5dfbabb348bccb737dbd79a987fcec03834f6d","after":"8bd8226bb0524b41fb753f0a43cbecc4af4caeb5","ref":"refs/heads/sagi/debug_cicd","pushedAt":"2024-09-02T12:24:39.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"SagiPolaczek","name":"Sagi Polaczek","path":"/SagiPolaczek","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56922146?s=80&v=4"},"commit":{"message":"try to reduce dgl version","shortMessageHtmlLink":"try to reduce dgl version"}},{"before":"236d611509fe3e4fbb26d1882414d37eb058778e","after":"965588c0ce5901e031517c9a7ea6ca891ad8fc2c","ref":"refs/heads/modular_tokenizer_refactor","pushedAt":"2024-09-02T08:08:12.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mosheraboh","name":"Moshiko Raboh","path":"/mosheraboh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/86309179?s=80&v=4"},"commit":{"message":"..","shortMessageHtmlLink":".."}},{"before":"18b72a78dc0be76db9be6369dce1dd34d5d5b079","after":"236d611509fe3e4fbb26d1882414d37eb058778e","ref":"refs/heads/modular_tokenizer_refactor","pushedAt":"2024-09-02T07:37:05.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mosheraboh","name":"Moshiko Raboh","path":"/mosheraboh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/86309179?s=80&v=4"},"commit":{"message":"..","shortMessageHtmlLink":".."}},{"before":"08866d1fed2a24c30f21dd2e30b2a8a19dfcc597","after":"18b72a78dc0be76db9be6369dce1dd34d5d5b079","ref":"refs/heads/modular_tokenizer_refactor","pushedAt":"2024-09-02T06:04:54.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mosheraboh","name":"Moshiko Raboh","path":"/mosheraboh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/86309179?s=80&v=4"},"commit":{"message":"..","shortMessageHtmlLink":".."}},{"before":"935ff4077cb2c11aa44aa475be8e1b75cb7d92ae","after":"2f5dfbabb348bccb737dbd79a987fcec03834f6d","ref":"refs/heads/sagi/debug_cicd","pushedAt":"2024-09-01T21:38:40.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"SagiPolaczek","name":"Sagi Polaczek","path":"/SagiPolaczek","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56922146?s=80&v=4"},"commit":{"message":"revert torch ver","shortMessageHtmlLink":"revert torch ver"}},{"before":"b6099ab7d1a83e91e857b163abb1ac15999bccf7","after":"935ff4077cb2c11aa44aa475be8e1b75cb7d92ae","ref":"refs/heads/sagi/debug_cicd","pushedAt":"2024-09-01T21:22:49.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"SagiPolaczek","name":"Sagi Polaczek","path":"/SagiPolaczek","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56922146?s=80&v=4"},"commit":{"message":"try torch 2.3.1","shortMessageHtmlLink":"try torch 2.3.1"}},{"before":"7b25592cbfcbe4ae49c15114964034da1efa3d59","after":"b6099ab7d1a83e91e857b163abb1ac15999bccf7","ref":"refs/heads/sagi/debug_cicd","pushedAt":"2024-09-01T18:46:14.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"SagiPolaczek","name":"Sagi Polaczek","path":"/SagiPolaczek","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56922146?s=80&v=4"},"commit":{"message":"revert torchtext version","shortMessageHtmlLink":"revert torchtext version"}},{"before":"95690392159a15085e739773db3a463a867fd9fb","after":"7b25592cbfcbe4ae49c15114964034da1efa3d59","ref":"refs/heads/sagi/debug_cicd","pushedAt":"2024-09-01T18:23:50.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"SagiPolaczek","name":"Sagi Polaczek","path":"/SagiPolaczek","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56922146?s=80&v=4"},"commit":{"message":"another try","shortMessageHtmlLink":"another try"}},{"before":"89bcc65e515e9d20f8d44d31ec55a235227093f2","after":"95690392159a15085e739773db3a463a867fd9fb","ref":"refs/heads/sagi/debug_cicd","pushedAt":"2024-09-01T16:31:37.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"SagiPolaczek","name":"Sagi Polaczek","path":"/SagiPolaczek","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56922146?s=80&v=4"},"commit":{"message":"do not enforce cuda version","shortMessageHtmlLink":"do not enforce cuda version"}},{"before":"d05bde7d806760b7684db391aeddd57ea325b1d0","after":"89bcc65e515e9d20f8d44d31ec55a235227093f2","ref":"refs/heads/sagi/debug_cicd","pushedAt":"2024-09-01T16:28:36.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"SagiPolaczek","name":"Sagi Polaczek","path":"/SagiPolaczek","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56922146?s=80&v=4"},"commit":{"message":"force env recreation","shortMessageHtmlLink":"force env recreation"}},{"before":"79a4685b1a78af827be45a4716bd9cf87eb2cf53","after":"d05bde7d806760b7684db391aeddd57ea325b1d0","ref":"refs/heads/sagi/debug_cicd","pushedAt":"2024-09-01T16:28:22.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"SagiPolaczek","name":"Sagi Polaczek","path":"/SagiPolaczek","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56922146?s=80&v=4"},"commit":{"message":"solved missmatch of cuda versions","shortMessageHtmlLink":"solved missmatch of cuda versions"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"startCursor":"Y3Vyc29yOnYyOpK7MjAyNC0wOS0yNVQxMDoxODoyNi4wMDAwMDBazwAAAATAKk6k","endCursor":"Y3Vyc29yOnYyOpK7MjAyNC0wOS0wMVQxNjoyODoyMi4wMDAwMDBazwAAAASp68T1"}},"title":"Activity · BiomedSciAI/fuse-drug"}