diff --git a/CHANGELOG.md b/CHANGELOG.md index 710f45d8..abb94d32 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -1,28 +1,75 @@ # Changelog -## [Unreleased](https://github.com/BlueBrain/NeuroTS/compare/3.1.1..HEAD) +## [3.3.0](https://github.com/BlueBrain/NeuroTS/compare/3.2.0..3.3.0) -> 6 April 2022 +> 13 March 2023 -### Uncategorized Changes +### Build +- Use find_namespace_packages instead of find_packages (Adrien Berchet - [#48](https://github.com/BlueBrain/NeuroTS/pull/48)) + +### New Features + +- new trunk generation algorithm (Alexis Arnaudon - [#49](https://github.com/BlueBrain/NeuroTS/pull/49)) +- Rework input validation process (Adrien Berchet - [#52](https://github.com/BlueBrain/NeuroTS/pull/52)) + +### Fixes + +- Report errors in list properly (Adrien Berchet - [#51](https://github.com/BlueBrain/NeuroTS/pull/51)) + +### Chores And Housekeeping + +- Apply Copier template (Adrien Berchet - [#57](https://github.com/BlueBrain/NeuroTS/pull/57)) +- Fix language detection (Adrien Berchet - [#50](https://github.com/BlueBrain/NeuroTS/pull/50)) + +### Refactoring and Updates + +- Apply Copier template (Adrien Berchet - [#46](https://github.com/BlueBrain/NeuroTS/pull/46)) + +### CI Improvements + +- Separate job for min_versions to speedup the CI (Adrien Berchet - [#58](https://github.com/BlueBrain/NeuroTS/pull/58)) +- Apply Copier template (Adrien Berchet - [#55](https://github.com/BlueBrain/NeuroTS/pull/55)) +- Test with minimal versions of dependencies (Adrien Berchet - [#53](https://github.com/BlueBrain/NeuroTS/pull/53)) + +### General Changes + +- Use diameter-synthesis by default (Alexis Arnaudon - [#47](https://github.com/BlueBrain/NeuroTS/pull/47)) +- Fix schemas and tests (Adrien Berchet - [#44](https://github.com/BlueBrain/NeuroTS/pull/44)) + +## [3.2.0](https://github.com/BlueBrain/NeuroTS/compare/3.1.1..3.2.0) + +> 26 August 2022 + +### Documentation Changes + +- Update DOI to the final article (Adrien Berchet - [#32](https://github.com/BlueBrain/NeuroTS/pull/32)) + +### CI Improvements + +- Use codespellignorelines files for format job (Adrien Berchet - [#41](https://github.com/BlueBrain/NeuroTS/pull/41)) +- Publish wheels on Pypi (Adrien Berchet - [#40](https://github.com/BlueBrain/NeuroTS/pull/40)) +- Use commitlint to check PR titles (Adrien Berchet - [#39](https://github.com/BlueBrain/NeuroTS/pull/39)) +- Move black, codespell, isort, pycodestyle and pydocstyle from tox to pre-commit (Adrien Berchet - [#29](https://github.com/BlueBrain/NeuroTS/pull/29)) + +### General Changes + +- Bar length warning under skip_validation (lidakanari - [#43](https://github.com/BlueBrain/NeuroTS/pull/43)) +- Compatibility of NeuriteType with NeuroM/MorphIO (Alexis Arnaudon - [#42](https://github.com/BlueBrain/NeuroTS/pull/42)) +- Update targeting/randomness to paper values (Alexis Arnaudon - [#30](https://github.com/BlueBrain/NeuroTS/pull/30)) +- Automatically build MyBinder docker image for each tag (Adrien Berchet - [#28](https://github.com/BlueBrain/NeuroTS/pull/28)) +- Update scipy requirement because of QHullError (Adrien Berchet - [#27](https://github.com/BlueBrain/NeuroTS/pull/27)) - Fix warnings (Eleftherios Zisis - [#25](https://github.com/BlueBrain/NeuroTS/pull/25)) - Update build-system (Eleftherios Zisis - [#26](https://github.com/BlueBrain/NeuroTS/pull/26)) - Explicitely states where the examples and related data are located (Adrien Berchet - [#24](https://github.com/BlueBrain/NeuroTS/pull/24)) - Remove useless installation of several packages in Github CI (Adrien Berchet - [#23](https://github.com/BlueBrain/NeuroTS/pull/23)) - Setup MyBinder (Adrien Berchet - [#22](https://github.com/BlueBrain/NeuroTS/pull/22)) -- Fix auto-changelog configuration (Adrien Berchet - [ddfc476](https://github.com/BlueBrain/NeuroTS/commit/ddfc476549712d8b2e1e28de06a1d30d48b5d1a9)) -- Allow empty type (Adrien Berchet - [5aa5d9c](https://github.com/BlueBrain/NeuroTS/commit/5aa5d9c4096fc83edfcc874cbd237067fa39ace0)) - -### CI Improvements - -- Move black, codespell, isort, pycodestyle and pydocstyle from tox to pre-commit (Adrien Berchet - [90b0667](https://github.com/BlueBrain/NeuroTS/commit/90b0667a6f87bb72bc7fe76cb9688747437d2607)) ## [3.1.1](https://github.com/BlueBrain/NeuroTS/compare/3.1.0..3.1.1) > 2 March 2022 -### Uncategorized Changes +### General Changes - Setup CodeCov (Adrien Berchet - [#20](https://github.com/BlueBrain/NeuroTS/pull/20)) diff --git a/setup.py b/setup.py index 17ae4fa6..d2e4c996 100644 --- a/setup.py +++ b/setup.py @@ -25,7 +25,7 @@ "matplotlib>=3.2.1", "morphio>=3.3.3,<4.0", "neurom>=3.0,<4.0", - "numpy>=1.21.0", + "numpy>=1.22.0", "scipy>=1.6", "tmd>=2.2.0", "diameter-synthesis>=0.5.2",