The following example notebooks demonstrate important use cases of the Connectome-Manipulator framework:
- Example 1 (minimal): Null manipulation
- Example 2 (basic): Remove connections
- Example 3 (basic): Rewire connections based on an adjacency matrix
- Example 4 (basic): Wire empty connectome from scratch
- Example 5 (basic): Model fitting with cross-validation
- Example 6 (basic): Correlation between physiological synapse parameters
- Example 7 (advanced): Interneuron rewiring in SSCx
- Example 8 (advanced): Simplified connectomes in SSCx
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