diff --git a/.auto-changelog-template.hbs b/.auto-changelog-template.hbs
index 5a2c3f9..60d2ab9 100644
--- a/.auto-changelog-template.hbs
+++ b/.auto-changelog-template.hbs
@@ -33,6 +33,8 @@ Example Definitions
       "([bB]reaking change:)": "",
       "(^[bB]uild:)": "",
       "(^[bB]uild\\()": "\\(",
+      "(^[dD]eprecate:)": "",
+      "(^[dD]eprecate\\()": "\\(",
       "(^[fF]eat:)": "",
       "(^[fF]eat\\()": "\\(",
       "(^[fF]ix:)": "",
@@ -84,7 +86,7 @@ Example Definitions
     - {{#if commit.breaking}}**Breaking change:** {{/if}}{{commit.subject}}{{#each fixes}} ({{author}}{{#if href}} - [#{{id}}]({{href}}){{/if}}){{/each}}
   {{/each}}
 
-  {{! List commits with 'breaking:' or 'Breaking change:' anywhere in the message under a heading}}
+  {{! List merge commits with 'breaking:' or 'Breaking change:' anywhere in the message under a heading}}
   {{#commit-list merges heading='### Breaking Changes :warning:' message='[bB]reaking [cC]hange:|[bB]reaking:' exclude='\[skip-changelog\]'}}
     - {{message}} @{{author}}  <!--[`#{{id}}`]({{href}}) -->
   {{/commit-list}}
@@ -94,6 +96,10 @@ Example Definitions
         - {{message}} ({{author}}{{#if href}} - [#{{id}}]({{href}}){{/if}})
       {{/commit-list}}
 
+      {{#commit-list merges heading='### Deprecated Features' message='^[dD]eprecate:|^[dD]eprecate\(' exclude='[bB]reaking [cC]hange:|[bB]reaking:|\[skip-changelog\]'}}
+        - {{message}} ({{author}}{{#if href}} - [#{{id}}]({{href}}){{/if}})
+      {{/commit-list}}
+
       {{#commit-list merges heading='### New Features' message='^[fF]eat:|^[fF]eat\(' exclude='[bB]reaking [cC]hange:|[bB]reaking:|\[skip-changelog\]'}}
         - {{message}} ({{author}}{{#if href}} - [#{{id}}]({{href}}){{/if}})
       {{/commit-list}}
@@ -130,7 +136,7 @@ Example Definitions
         - {{message}} ({{author}}{{#if href}} - [#{{id}}]({{href}}){{/if}})
       {{/commit-list}}
 
-      {{#commit-list merges heading='### General Changes' exclude='[bB]reaking [cC]hange:|[bB]reaking:|^[bB]uild:|^[bB]uild\(|^[fF]eat:|^[fF]eat\(|^[fF]ix:|^[fF]ix\(|^[cC]hore:|^[cC]hore\(|^[cC][iI]:|^[cC][iI]\(|^[dD]ocs:|^[dD]ocs\(|^[rR]efactor:|^[rR]efactor\(|^[tT]est:|^[tT]est\(|^[sS]tyle:|^[sS]tyle\(|^[pP]erf:|^[pP]erf\(|\[skip-changelog\]'}}
+      {{#commit-list merges heading='### General Changes' exclude='[bB]reaking [cC]hange:|[bB]reaking:|^[bB]uild:|^[bB]uild\(|^[dD]eprecate:|^[dD]eprecate\(|^[fF]eat:|^[fF]eat\(|^[fF]ix:|^[fF]ix\(|^[cC]hore:|^[cC]hore\(|^[cC][iI]:|^[cC][iI]\(|^[dD]ocs:|^[dD]ocs\(|^[rR]efactor:|^[rR]efactor\(|^[tT]est:|^[tT]est\(|^[sS]tyle:|^[sS]tyle\(|^[pP]erf:|^[pP]erf\(|\[skip-changelog\]'}}
         - {{message}} ({{author}}{{#if href}} - [#{{id}}]({{href}}){{/if}})
       {{/commit-list}}
 
@@ -144,6 +150,10 @@ Example Definitions
         - {{subject}} ({{author}}{{#if href}} - [{{shorthash}}]({{href}}){{/if}})
       {{/commit-list}}
 
+      {{#commit-list commits heading='### Deprecated Features' message='^[dD]eprecate:|^[dD]eprecate\(' exclude='[bB]reaking [cC]hange:|[bB]reaking:|\[skip-changelog\]'}}
+        - {{subject}} ({{author}}{{#if href}} - [{{shorthash}}]({{href}}){{/if}})
+      {{/commit-list}}
+
       {{#commit-list commits heading='### New Features' message='^[fF]eat:|^[fF]eat\(' exclude='[bB]reaking [cC]hange:|[bB]reaking:|\[skip-changelog\]'}}
         - {{subject}} ({{author}}{{#if href}} - [{{shorthash}}]({{href}}){{/if}})
       {{/commit-list}}
@@ -180,7 +190,7 @@ Example Definitions
         - {{subject}} ({{author}}{{#if href}} - [{{shorthash}}]({{href}}){{/if}})
       {{/commit-list}}
 
-      {{#commit-list commits heading='### General Changes' exclude='[bB]reaking [cC]hange:|[bB]reaking:|^[bB]uild:|^[bB]uild\(|^[fF]eat:|^[fF]eat\(|^[fF]ix:|^[fF]ix\(|^[cC]hore:|^[cC]hore\(|^[cC][iI]:|^[cC][iI]\(|^[dD]ocs:|^[dD]ocs\(|^[rR]efactor:|^[rR]efactor\(|^[tT]est:|^[tT]est\(|^[sS]tyle:|^[sS]tyle\(|^[pP]erf:|^[pP]erf\(|\[skip-changelog\]'}}
+      {{#commit-list commits heading='### General Changes' exclude='[bB]reaking [cC]hange:|[bB]reaking:|^[bB]uild:|^[bB]uild\(|^[dD]eprecate:|^[dD]eprecate\(|^[fF]eat:|^[fF]eat\(|^[fF]ix:|^[fF]ix\(|^[cC]hore:|^[cC]hore\(|^[cC][iI]:|^[cC][iI]\(|^[dD]ocs:|^[dD]ocs\(|^[rR]efactor:|^[rR]efactor\(|^[tT]est:|^[tT]est\(|^[sS]tyle:|^[sS]tyle\(|^[pP]erf:|^[pP]erf\(|\[skip-changelog\]'}}
         - {{subject}} ({{author}}{{#if href}} - [{{shorthash}}]({{href}}){{/if}})
       {{/commit-list}}
 
diff --git a/.copier-answers.yml b/.copier-answers.yml
index efaa353..28d1917 100644
--- a/.copier-answers.yml
+++ b/.copier-answers.yml
@@ -1,6 +1,6 @@
 # Changes here will be overwritten by Copier
 
-_commit: 0.1.36
+_commit: 0.1.47
 _src_path: git@bbpgitlab.epfl.ch:neuromath/python-template.git
 author_email: bbp-ou-cells@groupes.epfl.ch
 author_name: bbp-ou-cells
@@ -17,10 +17,11 @@ project_url: https://bbpteam.epfl.ch/documentation/projects/synthesis-workflow
 repository_name: synthesis-workflow
 repository_namespace: neuromath
 repository_provider: gitlab
+setup_codeql: false
 ssh_url: git@bbpgitlab.epfl.ch:neuromath/synthesis-workflow.git
-support_py37: false
 team_name: neuromath
 tracker_url: https://bbpteam.epfl.ch/project/issues/projects/CELLS/issues
+use_pyproject_toml: false
 version: 0.1.2.dev1
 
 # End of Copier answers
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index 973a543..710fe4c 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -15,7 +15,10 @@ include:
         - /ci/jobs/auto-release.yml
         - /ci/jobs/check-merge-request-title.yml
         - /ci/lib/pytest-template.yml
+        - /ci/jobs/py38.yml
         - /ci/jobs/py39.yml
+        - /ci/jobs/py310.yml
+        - /ci/jobs/min_versions.yml
         - /ci/jobs/coverage.yml
 
 .tox-template:
@@ -29,11 +32,6 @@ include:
     KUBERNETES_MEMORY_LIMIT: 4Gi
     KUBERNETES_MEMORY_REQUEST: 4Gi
 
-py38:
-  extends: .pytest-template
-  variables:
-    TOXENV: ${CI_JOB_NAME},${CI_JOB_NAME}-min_versions
-
 lint:
   variables:
     KUBERNETES_CPU_LIMIT: 1
diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
index c2c797e..d5be74b 100644
--- a/.pre-commit-config.yaml
+++ b/.pre-commit-config.yaml
@@ -13,7 +13,7 @@ repos:
       - id: end-of-file-fixer
       - id: trailing-whitespace
   - repo: https://github.com/alessandrojcm/commitlint-pre-commit-hook
-    rev: v9.4.0
+    rev: v9.5.0
     hooks:
         - id: commitlint
           stages:
@@ -24,11 +24,11 @@ repos:
     hooks:
       - id: isort
   - repo: https://github.com/psf/black
-    rev: 23.1.0
+    rev: 23.3.0
     hooks:
       - id: black
   - repo: https://github.com/codespell-project/codespell
-    rev: v2.2.2
+    rev: v2.2.4
     hooks:
       - id: codespell
         args: ["-x", ".codespellignorelines"]
diff --git a/commitlint.config.js b/commitlint.config.js
index 8090487..df424e4 100644
--- a/commitlint.config.js
+++ b/commitlint.config.js
@@ -20,6 +20,7 @@ module.exports = {
 				'Build',
 				'Chore',
 				'CI',
+				'Deprecate',
 				'Docs',
 				'Feat',
 				'Fix',
@@ -101,6 +102,11 @@ module.exports = {
 						title: 'Release',
 						emoji: '🎉',
 					},
+					Deprecate: {
+						description: 'Deprecate a feature',
+						title: 'Deprecations',
+						emoji: '🗳',
+					},
 				},
 			},
 			scope: {
diff --git a/package.json b/package.json
index 712977e..8e43834 100644
--- a/package.json
+++ b/package.json
@@ -10,6 +10,8 @@
       "(^[cC]hore\\((.*)\\): ?)": "\\($2\\)",
       "(^[cC][iI]: ?)": "",
       "(^[cC][iI]\\((.*)\\): ?)": "\\($2\\)",
+      "(^[dD]eprecate: ?)": "",
+      "(^[dD]eprecate\\((.*)\\): ?)": "\\($2\\)",
       "(^[dD]ocs: ?)": "",
       "(^[dD]ocs\\((.*)\\): ?)": "\\($2\\)",
       "(^[fF]eat: ?)": "",
diff --git a/pyproject.toml b/pyproject.toml
index 63f6fef..67f6ae7 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -1,20 +1,19 @@
-# SETUPTOOLS
 [build-system]
 requires = [
-    "setuptools>=42",
-    "wheel",
-    "setuptools_scm[toml]>=3.4",
+    "setuptools>=45",
 ]
+build-backend = "setuptools.build_meta"
+
 
-# BLACK
 [tool.black]
 line-length = 100
 target-version = [
     "py38",
     "py39",
+    "py310",
+    "py311",
 ]
 
-# PYDOCSTYLE
 [tool.pydocstyle]
 # ignore the following:
 #   - D107: Missing docstring in __init__
@@ -23,13 +22,11 @@ add-ignore = [
 ]
 convention = "google"
 
-# ISORT
 [tool.isort]
 profile = "black"
 line_length = 100
 force_single_line = true
 
-# PYTEST
 [tool.pytest.ini_options]
 testpaths = [
     "tests",
diff --git a/tox.ini b/tox.ini
index 2d3ddb2..078eb39 100644
--- a/tox.ini
+++ b/tox.ini
@@ -9,7 +9,7 @@ envlist =
     check-packaging
     lint
     docs
-    py38-min_versions
+    min_versions
     py{38,39,310,311}
     coverage
 
@@ -69,6 +69,9 @@ commands =
     python -m build -o {envtmpdir}/dist
     twine check {envtmpdir}/dist/*
 
+[testenv:min_versions]
+basepython = python3.8
+
 [testenv:lint]
 basepython = python3.8
 deps =