diff --git a/CMakeLists.txt b/CMakeLists.txt index 153a115d2..2a998ec35 100644 --- a/CMakeLists.txt +++ b/CMakeLists.txt @@ -12,8 +12,8 @@ SET( ${PROJECT_NAME}_Variant "Full" ) # the particular variant of CaPTk (Full/Ne # STRING(TIMESTAMP TODAY "%Y%m%d") SET( PROJECT_VERSION_MAJOR 1 ) -SET( PROJECT_VERSION_MINOR 8 ) -SET( PROJECT_VERSION_PATCH 2.Alpha.2 ) +SET( PROJECT_VERSION_MINOR 9 ) +SET( PROJECT_VERSION_PATCH 0.Alpha ) SET( PROJECT_VERSION_TWEAK ) # check for the string "nonRelease" in the PROJECT_VERSION_PATCH variable diff --git a/docs/1_credits.html b/docs/1_credits.html index 39ab7edf0..f58629854 100644 --- a/docs/1_credits.html +++ b/docs/1_credits.html @@ -12,7 +12,7 @@

- Cancer Imaging Phenomics Toolkit (CaPTk) v.1.8.2.Alpha.2  | Contact: software@cbica.upenn.edu + Cancer Imaging Phenomics Toolkit (CaPTk) v.1.9.0.Alpha  | Contact: software@cbica.upenn.edu
Disclaimer: CaPTk has been designed for non-commercial research purposes only and has not been reviewed or approved by the Food and Drug Administration (FDA). It is not intended or recommended for clinical application.
diff --git a/docs/BraTS_Metrics.html b/docs/BraTS_Metrics.html index b24be41b6..8e562f04f 100644 --- a/docs/BraTS_Metrics.html +++ b/docs/BraTS_Metrics.html @@ -3,7 +3,7 @@ - + Cancer Imaging Phenomics Toolkit (CaPTk): BraTS Similarity Metrics Computation (CLI Only) @@ -30,7 +30,7 @@
Cancer Imaging Phenomics Toolkit (CaPTk) -  1.8.2.Alpha.2 +  1.9.0.Alpha
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  • Training videos can be accessed in our YouTube Channel, specifically in the original and ITCR 2020 CaPTk Playlists.
  • All applications are available as command-line applications (use parameter "-h" for detailed help messages).
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  • The following command will train a new model based on the samples in the inputDir for a variance threshold of 99:
    ${CaPTk_InstallDir}/bin/PerfusionPCA.exe -t 0 -i C:/properly/formatted/inputDir -o C:/outputDir -vt 99
  • The following command will perform inference using an existing model for inputs in C:/input based on C:/modelDir using 5 principal components:
    ${CaPTk_InstallDir}/bin/PerfusionPCA.exe -t 1 -i C:/properly/formatted/inputDir -m C:/inputModelDir -o C:/outputDir -n 5
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    References:

    1. H.Akbari, L.Macyszyn, X.Da, R.L.Wolf, M.Bilello, R.Verma, D.M.O'Rourke, C.Davatzikos, "Pattern analysis of dynamic susceptibility contrast-enhanced MR imaging demonstrates peritumoral tissue heterogeneity", Radiology. 273(2):502-10, 2014, DOI:10.1148/radiol.14132458
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