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Perfusion Alignment fixes #1363

Merged
merged 57 commits into from
Nov 6, 2020
Merged

Perfusion Alignment fixes #1363

merged 57 commits into from
Nov 6, 2020

Commits on Oct 27, 2020

  1. added new parameter

    @sarthakpati
    sarthakpati committed Oct 27, 2020
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  2. Merge branch 'master' of https://github.com/CBICA/CaPTk into 1235

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    sarthakpati committed Oct 27, 2020
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  3. finished CLI, started parsing

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    sarthakpati committed Oct 27, 2020
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  4. updated parsing

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    sarthakpati committed Oct 27, 2020
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  5. updated example

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    sarthakpati committed Oct 27, 2020
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  6. passing all parameters into compute function

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    sarthakpati committed Oct 27, 2020
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  7. re-enabled the application from CLI

    @sarthakpati
    sarthakpati committed Oct 27, 2020
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  8. added mask to computation api

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    sarthakpati committed Oct 27, 2020
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  9. return mask

    @sarthakpati
    sarthakpati committed Oct 27, 2020
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  10. masking options

    @sarthakpati
    sarthakpati committed Oct 27, 2020
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  11. added new function to calculate std-dev

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    sarthakpati committed Oct 27, 2020
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  12. iterator added

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    sarthakpati committed Oct 27, 2020
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  13. using mask to iterate

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    sarthakpati committed Oct 27, 2020
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  14. finished the std-dev calculator and using it for "-m 1"

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    sarthakpati committed Oct 27, 2020
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  15. getting 10th percentile

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    sarthakpati committed Oct 27, 2020
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  16. mask calculation '1' completed

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    sarthakpati committed Oct 27, 2020
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  17. mask calculation type '2' finished

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    sarthakpati committed Oct 27, 2020
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  18. removed redundant code

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    sarthakpati committed Oct 27, 2020
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  19. added sanity check

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    sarthakpati committed Oct 27, 2020
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  20. added implementation to get the mean curve

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    sarthakpati committed Oct 27, 2020
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Commits on Oct 28, 2020

  1. updated sanity checks and re-using older implementation for mean

    @sarthakpati
    sarthakpati committed Oct 28, 2020
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  2. using the output resolution provided by user

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    sarthakpati committed Oct 28, 2020
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  3. no need for redundant comments

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    sarthakpati committed Oct 28, 2020
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  4. some typos fixed

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    sarthakpati committed Oct 28, 2020
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  5. redundant code removed

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    sarthakpati committed Oct 28, 2020
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  6. redundant code removed

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    sarthakpati committed Oct 28, 2020
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  7. enabled app on GUI

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    sarthakpati committed Oct 28, 2020
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  8. added special case for dir=0

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    sarthakpati committed Oct 28, 2020
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  9. added output time res

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    sarthakpati committed Oct 28, 2020
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  10. typo fix

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    sarthakpati committed Oct 28, 2020
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  11. added scale params

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    sarthakpati committed Oct 28, 2020
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  12. typo fix

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    sarthakpati committed Oct 28, 2020
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  13. reused a few variables and deleted others

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    sarthakpati committed Oct 28, 2020
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  14. updated the slot into which this fits in

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    sarthakpati committed Oct 28, 2020
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  15. updated signal call

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    sarthakpati committed Oct 28, 2020
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  16. added mask

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    sarthakpati committed Oct 28, 2020
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  17. Merge branch '1364' of https://github.com/sarthakpati/CaPTk into 1235

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    sarthakpati committed Oct 28, 2020
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  18. Merge branch '1364' of https://github.com/sarthakpati/CaPTk into 1235

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    sarthakpati committed Oct 28, 2020
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Commits on Oct 29, 2020

  1. Merge branch '1364' of https://github.com/sarthakpati/CaPTk into 1235

    @sarthakpati
    sarthakpati committed Oct 29, 2020
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  2. Merge branch 'master' into 1235

    @sarthakpati
    sarthakpati authored Oct 29, 2020
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Commits on Oct 30, 2020

  1. extra percentage was going up

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    sarthakpati committed Oct 30, 2020
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  2. Merge branch '1235' of https://github.com/sarthakpati/CaPTk into 1235

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    sarthakpati committed Oct 30, 2020
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  3. Merge branch 'master' into 1235

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    sarthakpati authored Oct 30, 2020
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Commits on Oct 31, 2020

  1. Merge branch 'master' of https://github.com/CBICA/CaPTk into 1235

    @sarthakpati
    sarthakpati committed Oct 31, 2020
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  2. Merge branch '1235' of https://github.com/sarthakpati/CaPTk into 1235

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    sarthakpati committed Oct 31, 2020
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Commits on Nov 2, 2020

  1. progress bar is being annoying

    @sarthakpati
    sarthakpati committed Nov 2, 2020
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  2. add option to resample across time

    @sarthakpati
    sarthakpati committed Nov 2, 2020
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  3. enable 4th dimension resample

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    sarthakpati committed Nov 2, 2020
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  4. this is working as expected

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    sarthakpati committed Nov 2, 2020
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  5. output in correct space

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    sarthakpati committed Nov 2, 2020
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  6. using input time resolution

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    sarthakpati committed Nov 2, 2020
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  7. ensuring the input time resolution is factored in

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    sarthakpati committed Nov 2, 2020
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  8. don't want that

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    sarthakpati committed Nov 2, 2020
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Commits on Nov 5, 2020

  1. cleaned up cli

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    sarthakpati committed Nov 5, 2020
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  2. extra masking options not needed

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    sarthakpati committed Nov 5, 2020
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  3. no need of the last 2 numbers

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    sarthakpati committed Nov 5, 2020
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  4. appropriate changes in interface (cli and gui)

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    sarthakpati committed Nov 5, 2020
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