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Assembly of the T47D cell line genome using Hi-C data

We use the approach proposed by Dudchenko et al. and available in the GitHub repo.

Index

Installation

cd /software/mb/el7.2/
git@github.com:theaidenlab/3d-dna.git
cd 3d-dna
chmod a+x run-pipeline.sh
# test
./run-pipeline.sh –h