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index.html
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<!DOCTYPE html>
<html>
<head lang="en">
<meta charset="UTF-8">
<title>Reacfoam</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=no"/>
<meta charset="utf-8"/>
<link href="resources/images/favicon.ico" rel="shortcut icon" type="image/vnd.microsoft.icon" />
<link href="lib/foamtree/assets/css/bootstrap.min.css" rel="stylesheet"/>
<link href="lib/foamtree/assets/css/common.css" rel="stylesheet"/>
<!-- Include the default style for the interaction hints and guide -->
<link href="lib/foamtree/assets/css/carrotsearch.foamtree.util.hints.css" rel="stylesheet"/>
<!-- Customised for Reactome -->
<link href="resources/css/custom.css" rel="stylesheet" />
</head>
<body>
<div id="container">
<div id="visualization"></div>
<!--Loading spinner-->
<div class="waiting" style="display:none; height: 100%; width: 100%;text-align: center;">
<div class="sk-circle">
<div class="sk-circle1 sk-child"></div>
<div class="sk-circle2 sk-child"></div>
<div class="sk-circle3 sk-child"></div>
<div class="sk-circle4 sk-child"></div>
<div class="sk-circle5 sk-child"></div>
<div class="sk-circle6 sk-child"></div>
<div class="sk-circle7 sk-child"></div>
<div class="sk-circle8 sk-child"></div>
<div class="sk-circle9 sk-child"></div>
<div class="sk-circle10 sk-child"></div>
<div class="sk-circle11 sk-child"></div>
<div class="sk-circle12 sk-child"></div>
</div>
</div>
</div>
<div class="bottomPanel">
<div id="layout">
View:
<a href="#flattened">flattened</a> | <a href="#hierarchical">hierarchical</a>
</div>
<div id = "expressionBar" style="display: none">
<button name="prev" title="Show Previous">«</button>
<button name="play" title="Play">▸</button>
<button name="next" title="Show Next">»</button>
<div id="columnNames"></div>
<button name="close" title="Close">×</button>
</div>
</div>
<!-- Include Hammer.js for mobile interactions and touch events. Not required for desktop-only apps. -->
<script src="lib/foamtree/assets/js/hammer.min.js"></script>
<!-- Foamtree library -->
<script src="lib/foamtree/carrotsearch.foamtree.js"></script>
<!-- A number of utilities we'll need -->
<script src="lib/jquery/jquery-3.3.1.min.js"></script>
<script src="https://ajax.googleapis.com/ajax/libs/webfont/1.4.7/webfont.js"></script>
<!--Custom javascript-->
<script src="resources/js/tools.js"></script>
<script src="resources/js/initiate.js"></script>
<script src="resources/js/getData.js"></script>
<script src="resources/js/foamtreeStarts.js"></script>
<script src="resources/js/foamtreeAnalysisStarts.js"></script>
<script src="resources/js/foamtreeAnalysisExpStarts.js"></script>
<!-- Include the interaction hints utility -->
<script src="resources/js/foamtreeHintsCustom.js"></script>
</body>
</html>