diff --git a/.dev/Manifest.toml b/.dev/Manifest.toml index 06f106e493..ec8e1d9495 100644 --- a/.dev/Manifest.toml +++ b/.dev/Manifest.toml @@ -28,9 +28,9 @@ version = "0.8.12" [[deps.Compat]] deps = ["Dates", "LinearAlgebra", "UUIDs"] -git-tree-sha1 = "7a60c856b9fa189eb34f5f8a6f6b5529b7942957" +git-tree-sha1 = "4e88377ae7ebeaf29a047aa1ee40826e0b708a5d" uuid = "34da2185-b29b-5c13-b0c7-acf172513d20" -version = "4.6.1" +version = "4.7.0" [[deps.CompilerSupportLibraries_jll]] deps = ["Artifacts", "Libdl"] @@ -44,9 +44,9 @@ version = "4.1.1" [[deps.DataStructures]] deps = ["Compat", "InteractiveUtils", "OrderedCollections"] -git-tree-sha1 = "d1fff3a548102f48987a52a2e0d114fa97d730f0" +git-tree-sha1 = "cf25ccb972fec4e4817764d01c82386ae94f77b4" uuid = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8" -version = "0.18.13" +version = "0.18.14" [[deps.Dates]] deps = ["Printf"] diff --git a/docs/Manifest.toml b/docs/Manifest.toml index d8a61cb4ca..41723d7c83 100644 --- a/docs/Manifest.toml +++ b/docs/Manifest.toml @@ -5,9 +5,9 @@ manifest_format = "2.0" project_hash = "742ff6c117e7a92658df5c1173a0238a5924d0d7" [[deps.ADTypes]] -git-tree-sha1 = "dcfdf328328f2645531c4ddebf841228aef74130" +git-tree-sha1 = "f5c25e8a5b29b5e941b7408bc8cc79fea4d9ef9a" uuid = "47edcb42-4c32-4615-8424-f2b9edc5f35b" -version = "0.1.3" +version = "0.1.6" [[deps.ANSIColoredPrinters]] git-tree-sha1 = "574baf8110975760d391c710b6341da1afa48d8c" @@ -16,9 +16,14 @@ version = "0.0.1" [[deps.AbstractFFTs]] deps = ["ChainRulesCore", "LinearAlgebra"] -git-tree-sha1 = "16b6dbc4cf7caee4e1e75c49485ec67b667098a0" +git-tree-sha1 = "cad4c758c0038eea30394b1b671526921ca85b21" uuid = "621f4979-c628-5d54-868e-fcf4e3e8185c" -version = "1.3.1" +version = "1.4.0" + +[[deps.AbstractLattices]] +git-tree-sha1 = "f35684b7349da49fcc8a9e520e30e45dbb077166" +uuid = "398f06c4-4d28-53ec-89ca-5b2656b7603d" +version = "0.2.1" [[deps.AbstractTrees]] git-tree-sha1 = "faa260e4cb5aba097a73fab382dd4b5819d8ec8c" @@ -61,9 +66,9 @@ version = "0.1.29" [[deps.ArrayLayouts]] deps = ["FillArrays", "LinearAlgebra", "SparseArrays"] -git-tree-sha1 = "1d9e98721e71dcf4db5a7d34f55d8aa07c43468f" +git-tree-sha1 = "0adeb373cb2268a0f4e62d349ce9957b509d4d7e" uuid = "4c555306-a7a7-4459-81d9-ec55ddd5c99a" -version = "1.0.6" +version = "1.1.0" [[deps.Artifacts]] uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33" @@ -75,10 +80,10 @@ uuid = "a9b6321e-bd34-4604-b9c9-b65b8de01458" version = "0.1.0" [[deps.Automa]] -deps = ["Printf", "ScanByte", "TranscodingStreams"] -git-tree-sha1 = "d50976f217489ce799e366d9561d56a98a30d7fe" +deps = ["ScanByte", "TranscodingStreams"] +git-tree-sha1 = "48e54446df62fdf9ef76959c32dc33f3cff659ee" uuid = "67c07d97-cdcb-5c2c-af73-a7f9c32a568b" -version = "0.8.2" +version = "0.8.3" [[deps.AxisAlgorithms]] deps = ["LinearAlgebra", "Random", "SparseArrays", "WoodburyMatrices"] @@ -88,9 +93,9 @@ version = "1.0.1" [[deps.AxisArrays]] deps = ["Dates", "IntervalSets", "IterTools", "RangeArrays"] -git-tree-sha1 = "1dd4d9f5beebac0c03446918741b1a03dc5e5788" +git-tree-sha1 = "16351be62963a67ac4083f748fdb3cca58bfd52f" uuid = "39de3d68-74b9-583c-8d2d-e117c070f3a9" -version = "0.4.6" +version = "0.4.7" [[deps.BFloat16s]] deps = ["LinearAlgebra", "Printf", "Random", "Test"] @@ -100,9 +105,9 @@ version = "0.4.2" [[deps.BandedMatrices]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "PrecompileTools", "SparseArrays"] -git-tree-sha1 = "9ad46355045491b12eab409dee73e9de46293aa2" +git-tree-sha1 = "faf8639a185bed4babd2e688ace992b14ea44a04" uuid = "aae01518-5342-5314-be14-df237901396f" -version = "0.17.28" +version = "0.17.33" [[deps.Base64]] uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" @@ -137,9 +142,9 @@ version = "0.1.5" [[deps.BlockArrays]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra"] -git-tree-sha1 = "0ecda033ef5b33c70787407ff5e4f939269b8b36" +git-tree-sha1 = "174b4970af15a500a29e76151f5c53195784b9d4" uuid = "8e7c35d0-a365-5155-bbbb-fb81a777f24e" -version = "0.16.32" +version = "0.16.36" [[deps.Bzip2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -167,11 +172,23 @@ version = "0.2.3" [[deps.CRC32c]] uuid = "8bf52ea8-c179-5cab-976a-9e18b702a9bc" +[[deps.CRlibm]] +deps = ["CRlibm_jll"] +git-tree-sha1 = "32abd86e3c2025db5172aa182b982debed519834" +uuid = "96374032-68de-5a5b-8d9e-752f78720389" +version = "1.0.1" + +[[deps.CRlibm_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "e329286945d0cfc04456972ea732551869af1cfc" +uuid = "4e9b3aee-d8a1-5a3d-ad8b-7d824db253f0" +version = "1.0.1+0" + [[deps.CUDA]] -deps = ["AbstractFFTs", "Adapt", "BFloat16s", "CEnum", "CUDA_Driver_jll", "CUDA_Runtime_Discovery", "CUDA_Runtime_jll", "CompilerSupportLibraries_jll", "ExprTools", "GPUArrays", "GPUCompiler", "KernelAbstractions", "LLVM", "LazyArtifacts", "Libdl", "LinearAlgebra", "Logging", "Preferences", "Printf", "Random", "Random123", "RandomNumbers", "Reexport", "Requires", "SparseArrays", "SpecialFunctions", "UnsafeAtomicsLLVM"] -git-tree-sha1 = "442d989978ed3ff4e174c928ee879dc09d1ef693" +deps = ["AbstractFFTs", "Adapt", "BFloat16s", "CEnum", "CUDA_Driver_jll", "CUDA_Runtime_Discovery", "CUDA_Runtime_jll", "ExprTools", "GPUArrays", "GPUCompiler", "KernelAbstractions", "LLVM", "LazyArtifacts", "Libdl", "LinearAlgebra", "Logging", "Preferences", "Printf", "Random", "Random123", "RandomNumbers", "Reexport", "Requires", "SparseArrays", "SpecialFunctions", "UnsafeAtomicsLLVM"] +git-tree-sha1 = "35160ef0f03b14768abfd68b830f8e3940e8e0dc" uuid = "052768ef-5323-5732-b1bb-66c8b64840ba" -version = "4.3.2" +version = "4.4.0" [[deps.CUDA_Driver_jll]] deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "Pkg"] @@ -210,22 +227,22 @@ uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" version = "1.16.0" [[deps.ChangesOfVariables]] -deps = ["LinearAlgebra", "Test"] -git-tree-sha1 = "f84967c4497e0e1955f9a582c232b02847c5f589" +deps = ["InverseFunctions", "LinearAlgebra", "Test"] +git-tree-sha1 = "2fba81a302a7be671aefe194f0525ef231104e7f" uuid = "9e997f8a-9a97-42d5-a9f1-ce6bfc15e2c0" -version = "0.1.7" +version = "0.1.8" [[deps.ClimaComms]] deps = ["CUDA", "MPI"] -git-tree-sha1 = "483971be380aefef7d576797508c7f3159c39775" +git-tree-sha1 = "6cbe1b835f91033e6326a92ac1a1f6a8c9b2215f" uuid = "3a4d1b5c-c61d-41fd-a00a-5873ba7a1b0d" -version = "0.5.0" +version = "0.5.3" [[deps.ClimaCore]] deps = ["Adapt", "BandedMatrices", "BlockArrays", "CUDA", "ClimaComms", "CubedSphere", "DataStructures", "DiffEqBase", "DocStringExtensions", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "LinearAlgebra", "PkgVersion", "RecursiveArrayTools", "Requires", "RootSolvers", "SparseArrays", "Static", "StaticArrays", "Statistics", "UnPack"] path = ".." uuid = "d414da3d-4745-48bb-8d80-42e94e092884" -version = "0.10.42" +version = "0.10.46" [[deps.ClimaCoreMakie]] deps = ["ClimaCore", "Makie"] @@ -265,9 +282,9 @@ version = "0.1.12" [[deps.CodecZlib]] deps = ["TranscodingStreams", "Zlib_jll"] -git-tree-sha1 = "9c209fb7536406834aa938fb149964b985de6c83" +git-tree-sha1 = "02aa26a4cf76381be7f66e020a3eddeb27b0a092" uuid = "944b1d66-785c-5afd-91f1-9de20f533193" -version = "0.7.1" +version = "0.7.2" [[deps.ColorBrewer]] deps = ["Colors", "JSON", "Test"] @@ -277,9 +294,9 @@ version = "0.4.0" [[deps.ColorSchemes]] deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "PrecompileTools", "Random"] -git-tree-sha1 = "be6ab11021cd29f0344d5c4357b163af05a48cba" +git-tree-sha1 = "dd3000d954d483c1aad05fe1eb9e6a715c97013e" uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4" -version = "3.21.0" +version = "3.22.0" [[deps.ColorTypes]] deps = ["FixedPointNumbers", "Random"] @@ -299,6 +316,11 @@ git-tree-sha1 = "fc08e5930ee9a4e03f84bfb5211cb54e7769758a" uuid = "5ae59095-9a9b-59fe-a467-6f913c188581" version = "0.12.10" +[[deps.Combinatorics]] +git-tree-sha1 = "08c8b6831dc00bfea825826be0bc8336fc369860" +uuid = "861a8166-3701-5b0c-9a16-15d98fcdc6aa" +version = "1.0.2" + [[deps.CommonDataModel]] deps = ["CFTime", "DataStructures", "Dates", "Preferences", "Printf"] git-tree-sha1 = "2678b3fc170d582655a14d22867b031b6e43c2d4" @@ -318,9 +340,9 @@ version = "0.3.0" [[deps.Compat]] deps = ["Dates", "LinearAlgebra", "UUIDs"] -git-tree-sha1 = "4e88377ae7ebeaf29a047aa1ee40826e0b708a5d" +git-tree-sha1 = "5ce999a19f4ca23ea484e92a1774a61b8ca4cf8e" uuid = "34da2185-b29b-5c13-b0c7-acf172513d20" -version = "4.7.0" +version = "4.8.0" [[deps.CompilerSupportLibraries_jll]] deps = ["Artifacts", "Libdl"] @@ -329,15 +351,15 @@ version = "1.0.1+0" [[deps.ConcurrentUtilities]] deps = ["Serialization", "Sockets"] -git-tree-sha1 = "96d823b94ba8d187a6d8f0826e731195a74b90e9" +git-tree-sha1 = "5372dbbf8f0bdb8c700db5367132925c0771ef7e" uuid = "f0e56b4a-5159-44fe-b623-3e5288b988bb" -version = "2.2.0" +version = "2.2.1" [[deps.ConstructionBase]] deps = ["LinearAlgebra"] -git-tree-sha1 = "738fec4d684a9a6ee9598a8bfee305b26831f28c" +git-tree-sha1 = "fe2838a593b5f776e1597e086dcd47560d94e816" uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9" -version = "1.5.2" +version = "1.5.3" [[deps.Contour]] git-tree-sha1 = "d05d9e7b7aedff4e5b51a029dced05cfb6125781" @@ -363,9 +385,9 @@ version = "1.15.0" [[deps.DataStructures]] deps = ["Compat", "InteractiveUtils", "OrderedCollections"] -git-tree-sha1 = "d1fff3a548102f48987a52a2e0d114fa97d730f0" +git-tree-sha1 = "cf25ccb972fec4e4817764d01c82386ae94f77b4" uuid = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8" -version = "0.18.13" +version = "0.18.14" [[deps.DataValueInterfaces]] git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6" @@ -376,6 +398,12 @@ version = "1.0.0" deps = ["Printf"] uuid = "ade2ca70-3891-5945-98fb-dc099432e06a" +[[deps.DelaunayTriangulation]] +deps = ["DataStructures", "EnumX", "ExactPredicates", "MakieCore", "Random", "SimpleGraphs"] +git-tree-sha1 = "a1d8532de83f8ce964235eff1edeff9581144d02" +uuid = "927a84f5-c5f4-47a5-9785-b46e178433df" +version = "0.7.2" + [[deps.DelimitedFiles]] deps = ["Mmap"] uuid = "8bb1440f-4735-579b-a4ab-409b98df4dab" @@ -388,9 +416,9 @@ version = "0.4.0" [[deps.DiffEqBase]] deps = ["ArrayInterface", "ChainRulesCore", "DataStructures", "Distributions", "DocStringExtensions", "EnumX", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "Printf", "RecursiveArrayTools", "Reexport", "Requires", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces", "ZygoteRules"] -git-tree-sha1 = "0a7dd11dd243a1f8c71f72f2e5fd54c0bfdeaaab" +git-tree-sha1 = "c5692436e7f8279503466db216c74165d1b301e4" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.125.1" +version = "6.127.0" [[deps.DiffResults]] deps = ["StaticArraysCore"] @@ -406,9 +434,9 @@ version = "1.15.1" [[deps.Distances]] deps = ["LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI"] -git-tree-sha1 = "49eba9ad9f7ead780bfb7ee319f962c811c6d3b2" +git-tree-sha1 = "b6def76ffad15143924a2199f72a5cd883a2e8a9" uuid = "b4f34e82-e78d-54a5-968a-f98e89d6e8f7" -version = "0.10.8" +version = "0.10.9" [[deps.Distributed]] deps = ["Random", "Serialization", "Sockets"] @@ -416,9 +444,9 @@ uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[deps.Distributions]] deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "Test"] -git-tree-sha1 = "4ed4a6df2548a72f66e03f3a285cd1f3b573035d" +git-tree-sha1 = "e76a3281de2719d7c81ed62c6ea7057380c87b1d" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.96" +version = "0.25.98" [[deps.DocStringExtensions]] deps = ["LibGit2"] @@ -428,15 +456,15 @@ version = "0.9.3" [[deps.Documenter]] deps = ["ANSIColoredPrinters", "Base64", "Dates", "DocStringExtensions", "IOCapture", "InteractiveUtils", "JSON", "LibGit2", "Logging", "Markdown", "REPL", "Test", "Unicode"] -git-tree-sha1 = "58fea7c536acd71f3eef6be3b21c0df5f3df88fd" +git-tree-sha1 = "39fd748a73dce4c05a9655475e437170d8fb1b67" uuid = "e30172f5-a6a5-5a46-863b-614d45cd2de4" -version = "0.27.24" +version = "0.27.25" [[deps.DocumenterCitations]] -deps = ["Bibliography", "DataStructures", "Documenter", "Markdown", "Unicode"] -git-tree-sha1 = "256f098ebde08780f058a9c84b4d08601b4ed2b4" +deps = ["Bibliography", "Documenter", "Markdown", "OrderedCollections", "Unicode"] +git-tree-sha1 = "b4b45d64eea45d96b5d35ec9ef4a0de15b7f2cdb" uuid = "daee34ce-89f3-4625-b898-19384cb65244" -version = "0.2.12" +version = "1.0.0" [[deps.Downloads]] deps = ["ArgTools", "FileWatching", "LibCURL", "NetworkOptions"] @@ -465,6 +493,17 @@ git-tree-sha1 = "bdb1942cd4c45e3c678fd11569d5cccd80976237" uuid = "4e289a0a-7415-4d19-859d-a7e5c4648b56" version = "1.0.4" +[[deps.ErrorfreeArithmetic]] +git-tree-sha1 = "d6863c556f1142a061532e79f611aa46be201686" +uuid = "90fa49ef-747e-5e6f-a989-263ba693cf1a" +version = "0.5.2" + +[[deps.ExactPredicates]] +deps = ["IntervalArithmetic", "Random", "StaticArraysCore", "Test"] +git-tree-sha1 = "276e83bc8b21589b79303b9985c321024ffdf59c" +uuid = "429591f6-91af-11e9-00e2-59fbe8cec110" +version = "2.2.5" + [[deps.ExceptionUnwrapping]] deps = ["Test"] git-tree-sha1 = "e90caa41f5a86296e014e148ee061bd6c3edec96" @@ -484,9 +523,9 @@ uuid = "d4d017d3-3776-5f7e-afef-a10c40355c18" version = "1.24.0" [[deps.ExprTools]] -git-tree-sha1 = "c1d06d129da9f55715c6c212866f5b1bddc5fa00" +git-tree-sha1 = "27415f162e6028e81c72b82ef756bf321213b6ec" uuid = "e2ba6199-217a-4e67-a87a-7c52f15ade04" -version = "0.1.9" +version = "0.1.10" [[deps.Extents]] git-tree-sha1 = "5e1e4c53fa39afe63a7d356e30452249365fba99" @@ -519,9 +558,9 @@ version = "3.3.10+0" [[deps.FastBroadcast]] deps = ["ArrayInterface", "LinearAlgebra", "Polyester", "Static", "StaticArrayInterface", "StrideArraysCore"] -git-tree-sha1 = "d1248fceea0b26493fd33e8e9e8c553270da03bd" +git-tree-sha1 = "aa9925a229d45fe3018715238956766fa21804d1" uuid = "7034ab61-46d4-4ed7-9d0f-46aef9175898" -version = "0.2.5" +version = "0.2.6" [[deps.FastClosures]] git-tree-sha1 = "acebe244d53ee1b461970f8910c235b259e772ef" @@ -530,9 +569,15 @@ version = "0.3.2" [[deps.FastLapackInterface]] deps = ["LinearAlgebra"] -git-tree-sha1 = "c1293a93193f0ae94be7cf338d33e162c39d8788" +git-tree-sha1 = "b12f05108e405dadcc2aff0008db7f831374e051" uuid = "29a986be-02c6-4525-aec4-84b980013641" -version = "1.2.9" +version = "2.0.0" + +[[deps.FastRounding]] +deps = ["ErrorfreeArithmetic", "LinearAlgebra"] +git-tree-sha1 = "6344aa18f654196be82e62816935225b3b9abe44" +uuid = "fa42c844-2597-5d31-933b-ebd51ab2693f" +version = "0.3.1" [[deps.FileIO]] deps = ["Pkg", "Requires", "UUIDs"] @@ -545,9 +590,9 @@ uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee" [[deps.FillArrays]] deps = ["LinearAlgebra", "Random", "SparseArrays", "Statistics"] -git-tree-sha1 = "e17cc4dc2d0b0b568e80d937de8ed8341822de67" +git-tree-sha1 = "f372472e8672b1d993e93dada09e23139b509f9e" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "1.2.0" +version = "1.5.0" [[deps.FiniteDiff]] deps = ["ArrayInterface", "LinearAlgebra", "Requires", "Setfield", "SparseArrays", "StaticArrays"] @@ -638,21 +683,21 @@ version = "0.1.5" [[deps.GPUCompiler]] deps = ["ExprTools", "InteractiveUtils", "LLVM", "Libdl", "Logging", "Scratch", "TimerOutputs", "UUIDs"] -git-tree-sha1 = "cb090aea21c6ca78d59672a7e7d13bd56d09de64" +git-tree-sha1 = "72b2e3c2ba583d1a7aa35129e56cf92e07c083e3" uuid = "61eb1bfa-7361-4325-ad38-22787b887f55" -version = "0.20.3" +version = "0.21.4" [[deps.GR]] deps = ["Artifacts", "Base64", "DelimitedFiles", "Downloads", "GR_jll", "HTTP", "JSON", "Libdl", "LinearAlgebra", "Pkg", "Preferences", "Printf", "Random", "Serialization", "Sockets", "TOML", "Tar", "Test", "UUIDs", "p7zip_jll"] -git-tree-sha1 = "8b8a2fd4536ece6e554168c21860b6820a8a83db" +git-tree-sha1 = "d73afa4a2bb9de56077242d98cf763074ab9a970" uuid = "28b8d3ca-fb5f-59d9-8090-bfdbd6d07a71" -version = "0.72.7" +version = "0.72.9" [[deps.GR_jll]] -deps = ["Artifacts", "Bzip2_jll", "Cairo_jll", "FFMPEG_jll", "Fontconfig_jll", "GLFW_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pixman_jll", "Qt5Base_jll", "Zlib_jll", "libpng_jll"] -git-tree-sha1 = "19fad9cd9ae44847fe842558a744748084a722d1" +deps = ["Artifacts", "Bzip2_jll", "Cairo_jll", "FFMPEG_jll", "Fontconfig_jll", "GLFW_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pixman_jll", "Qt6Base_jll", "Zlib_jll", "libpng_jll"] +git-tree-sha1 = "f61f768bf090d97c532d24b64e07b237e9bb7b6b" uuid = "d2c73de3-f751-5644-a686-071e5b155ba9" -version = "0.72.7+0" +version = "0.72.9+0" [[deps.GaussQuadrature]] deps = ["SpecialFunctions"] @@ -673,10 +718,10 @@ uuid = "cf35fbd7-0cd7-5166-be24-54bfbe79505f" version = "1.3.1" [[deps.GeometryBasics]] -deps = ["EarCut_jll", "GeoInterface", "IterTools", "LinearAlgebra", "StaticArrays", "StructArrays", "Tables"] -git-tree-sha1 = "659140c9375afa2f685e37c1a0b9c9a60ef56b40" +deps = ["EarCut_jll", "Extents", "GeoInterface", "IterTools", "LinearAlgebra", "StaticArrays", "StructArrays", "Tables"] +git-tree-sha1 = "424a5a6ce7c5d97cca7bcc4eac551b97294c54af" uuid = "5c1252a2-5f33-56bf-86c9-59e7332b4326" -version = "0.4.7" +version = "0.4.9" [[deps.Gettext_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "XML2_jll"] @@ -738,9 +783,9 @@ version = "1.12.2+2" [[deps.HTTP]] deps = ["Base64", "CodecZlib", "ConcurrentUtilities", "Dates", "ExceptionUnwrapping", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] -git-tree-sha1 = "2613d054b0e18a3dea99ca1594e9a3960e025da4" +git-tree-sha1 = "cb56ccdd481c0dd7f975ad2b3b62d9eda088f7e2" uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3" -version = "1.9.7" +version = "1.9.14" [[deps.HarfBuzz_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "Graphite2_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg"] @@ -756,9 +801,9 @@ version = "0.1.15" [[deps.HypergeometricFunctions]] deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"] -git-tree-sha1 = "0ec02c648befc2f94156eaef13b0f38106212f3f" +git-tree-sha1 = "f218fe3736ddf977e0e772bc9a586b2383da2685" uuid = "34004b35-14d8-5ef3-9330-4cdb6864b03a" -version = "0.3.17" +version = "0.3.23" [[deps.IOCapture]] deps = ["Logging", "Random"] @@ -773,9 +818,9 @@ version = "0.1.1" [[deps.ImageAxes]] deps = ["AxisArrays", "ImageBase", "ImageCore", "Reexport", "SimpleTraits"] -git-tree-sha1 = "c54b581a83008dc7f292e205f4c409ab5caa0f04" +git-tree-sha1 = "2e4520d67b0cef90865b3ef727594d2a58e0e1f8" uuid = "2803e5a7-5153-5ecf-9a86-9b4c37f5f5ac" -version = "0.6.10" +version = "0.6.11" [[deps.ImageBase]] deps = ["ImageCore", "Reexport"] @@ -791,15 +836,15 @@ version = "0.9.4" [[deps.ImageIO]] deps = ["FileIO", "IndirectArrays", "JpegTurbo", "LazyModules", "Netpbm", "OpenEXR", "PNGFiles", "QOI", "Sixel", "TiffImages", "UUIDs"] -git-tree-sha1 = "342f789fd041a55166764c351da1710db97ce0e0" +git-tree-sha1 = "bca20b2f5d00c4fbc192c3212da8fa79f4688009" uuid = "82e4d734-157c-48bb-816b-45c225c6df19" -version = "0.6.6" +version = "0.6.7" [[deps.ImageMetadata]] deps = ["AxisArrays", "ImageAxes", "ImageBase", "ImageCore"] -git-tree-sha1 = "36cbaebed194b292590cba2593da27b34763804a" +git-tree-sha1 = "355e2b974f2e3212a75dfb60519de21361ad3cb7" uuid = "bc367c6b-8a6b-528e-b4bd-a4b897500b49" -version = "0.9.8" +version = "0.9.9" [[deps.Imath_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -817,6 +862,11 @@ git-tree-sha1 = "5cd07aab533df5170988219191dfad0519391428" uuid = "d25df0c9-e2be-5dd7-82c8-3ad0b3e990b9" version = "0.1.3" +[[deps.IntegerMathUtils]] +git-tree-sha1 = "b8ffb903da9f7b8cf695a8bead8e01814aa24b30" +uuid = "18e54dd8-cb9d-406c-a71d-865a43cbb235" +version = "0.1.2" + [[deps.IntelOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] git-tree-sha1 = "0cb9352ef2e01574eeebdb102948a58740dcaf83" @@ -833,17 +883,23 @@ git-tree-sha1 = "721ec2cf720536ad005cb38f50dbba7b02419a15" uuid = "a98d9a8b-a2ab-59e6-89dd-64a1c18fca59" version = "0.14.7" +[[deps.IntervalArithmetic]] +deps = ["CRlibm", "FastRounding", "LinearAlgebra", "Markdown", "Random", "RecipesBase", "RoundingEmulator", "SetRounding", "StaticArrays"] +git-tree-sha1 = "5ab7744289be503d76a944784bac3f2df7b809af" +uuid = "d1acc4aa-44c8-5952-acd4-ba5d80a2a253" +version = "0.20.9" + [[deps.IntervalSets]] deps = ["Dates", "Random", "Statistics"] -git-tree-sha1 = "16c0cc91853084cb5f58a78bd209513900206ce6" +git-tree-sha1 = "19ef25c6befb8076aefbc6f89d9011b415fb25da" uuid = "8197267c-284f-5f27-9208-e0e47529a953" -version = "0.7.4" +version = "0.7.5" [[deps.InverseFunctions]] deps = ["Test"] -git-tree-sha1 = "6667aadd1cdee2c6cd068128b3d226ebc4fb0c67" +git-tree-sha1 = "eabe3125edba5c9c10b60a160b1779a000dc8b29" uuid = "3587e190-3f89-42d0-90ee-14403ec27112" -version = "0.1.9" +version = "0.1.11" [[deps.IrrationalConstants]] git-tree-sha1 = "630b497eafcc20001bba38a4651b327dcfc491d2" @@ -885,16 +941,16 @@ uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6" version = "0.21.4" [[deps.JSONSchema]] -deps = ["Downloads", "HTTP", "JSON", "URIs"] -git-tree-sha1 = "58cb291b01508293f7a9dc88325bc00d797cf04d" +deps = ["Downloads", "JSON", "URIs"] +git-tree-sha1 = "9b922425fbb02fa7698cd950420aba6058cb79f1" uuid = "7d188eb4-7ad8-530c-ae41-71a32a6d4692" -version = "1.1.0" +version = "1.2.0" [[deps.JpegTurbo]] deps = ["CEnum", "FileIO", "ImageCore", "JpegTurbo_jll", "TOML"] -git-tree-sha1 = "106b6aa272f294ba47e96bd3acbabdc0407b5c60" +git-tree-sha1 = "327713faef2a3e5c80f96bf38d1fa26f7a6ae29e" uuid = "b835a17e-a41a-41e7-81f0-2f016b05efe0" -version = "0.1.2" +version = "0.1.3" [[deps.JpegTurbo_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -909,10 +965,10 @@ uuid = "ef3ab10e-7fda-4108-b977-705223b18434" version = "0.4.0" [[deps.KernelAbstractions]] -deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"] -git-tree-sha1 = "b48617c5d764908b5fac493cd907cf33cc11eec1" +deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "Requires", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"] +git-tree-sha1 = "4c5875e4c228247e1c2b087669846941fb6e0118" uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c" -version = "0.9.6" +version = "0.9.8" [[deps.KernelDensity]] deps = ["Distributions", "DocStringExtensions", "FFTW", "Interpolations", "StatsBase"] @@ -922,9 +978,9 @@ version = "0.6.7" [[deps.Krylov]] deps = ["LinearAlgebra", "Printf", "SparseArrays"] -git-tree-sha1 = "0356a64062656b0cbb43c504ad5de338251f4bda" +git-tree-sha1 = "6dc4ad9cd74ad4ca0a8e219e945dbd22039f2125" uuid = "ba0b0d4f-ebba-5204-a429-3ac8c609bfb7" -version = "0.9.1" +version = "0.9.2" [[deps.LAME_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -940,15 +996,15 @@ version = "3.0.0+1" [[deps.LLVM]] deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Printf", "Unicode"] -git-tree-sha1 = "5007c1421563108110bbd57f63d8ad4565808818" +git-tree-sha1 = "8695a49bfe05a2dc0feeefd06b4ca6361a018729" uuid = "929cbde3-209d-540e-8aea-75f648917ca0" -version = "5.2.0" +version = "6.1.0" [[deps.LLVMExtra_jll]] deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] -git-tree-sha1 = "1222116d7313cdefecf3d45a2bc1a89c4e7c9217" +git-tree-sha1 = "c35203c1e1002747da220ffc3c0762ce7754b08c" uuid = "dad2f222-ce93-54a1-a47d-0025e8a3acab" -version = "0.0.22+0" +version = "0.0.23+0" [[deps.LLVMOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1053,10 +1109,10 @@ uuid = "4b2f31a3-9ecc-558c-b454-b3730dcb73e9" version = "2.35.0+0" [[deps.Libtiff_jll]] -deps = ["Artifacts", "JLLWrappers", "JpegTurbo_jll", "LERC_jll", "Libdl", "Pkg", "Zlib_jll", "Zstd_jll"] -git-tree-sha1 = "3eb79b0ca5764d4799c06699573fd8f533259713" +deps = ["Artifacts", "JLLWrappers", "JpegTurbo_jll", "LERC_jll", "Libdl", "XZ_jll", "Zlib_jll", "Zstd_jll"] +git-tree-sha1 = "2da088d113af58221c52828a80378e16be7d037a" uuid = "89763e89-9b03-5906-acba-b20f662cd828" -version = "4.4.0+0" +version = "4.5.1+1" [[deps.Libuuid_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1080,11 +1136,17 @@ version = "7.2.0" deps = ["Libdl", "libblastrampoline_jll"] uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" +[[deps.LinearAlgebraX]] +deps = ["LinearAlgebra", "Mods", "Permutations", "Primes", "SimplePolynomials"] +git-tree-sha1 = "558a338f1eeabe933f9c2d4052aa7c2c707c3d52" +uuid = "9b3f67b0-2d00-526e-9884-9e4938f8fb88" +version = "0.1.12" + [[deps.LinearSolve]] deps = ["ArrayInterface", "DocStringExtensions", "EnumX", "FastLapackInterface", "GPUArraysCore", "InteractiveUtils", "KLU", "Krylov", "LinearAlgebra", "PrecompileTools", "Preferences", "RecursiveFactorization", "Reexport", "Requires", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Sparspak", "SuiteSparse", "UnPack"] -git-tree-sha1 = "c6a6f78167d7b7c19dfb7148161d7f1962a0b361" +git-tree-sha1 = "1b55771f2c211583ad52af5a5ca6475be374c961" uuid = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae" -version = "2.2.1" +version = "2.4.1" [[deps.Literate]] deps = ["Base64", "IOCapture", "JSON", "REPL"] @@ -1109,9 +1171,9 @@ version = "1.0.0" [[deps.LoopVectorization]] deps = ["ArrayInterface", "ArrayInterfaceCore", "CPUSummary", "ChainRulesCore", "CloseOpenIntervals", "DocStringExtensions", "ForwardDiff", "HostCPUFeatures", "IfElse", "LayoutPointers", "LinearAlgebra", "OffsetArrays", "PolyesterWeave", "PrecompileTools", "SIMDTypes", "SLEEFPirates", "SpecialFunctions", "Static", "StaticArrayInterface", "ThreadingUtilities", "UnPack", "VectorizationBase"] -git-tree-sha1 = "e4eed22d70ac91d7a4bf9e0f6902383061d17105" +git-tree-sha1 = "c88a4afe1703d731b1c4fdf4e3c7e77e3b176ea2" uuid = "bdcacae8-1622-11e9-2a5c-532679323890" -version = "0.12.162" +version = "0.12.165" [[deps.MKL_jll]] deps = ["Artifacts", "IntelOpenMP_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "Pkg"] @@ -1133,9 +1195,9 @@ version = "4.1.2+0" [[deps.MPIPreferences]] deps = ["Libdl", "Preferences"] -git-tree-sha1 = "d86a788b336e8ae96429c0c42740ccd60ac0dfcc" +git-tree-sha1 = "781916a2ebf2841467cda03b6f1af43e23839d85" uuid = "3da0fdf6-3ccc-4f1b-acd9-58baa6c99267" -version = "0.1.8" +version = "0.1.9" [[deps.MPItrampoline_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML"] @@ -1150,16 +1212,16 @@ uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" version = "0.5.10" [[deps.Makie]] -deps = ["Animations", "Base64", "ColorBrewer", "ColorSchemes", "ColorTypes", "Colors", "Contour", "Distributions", "DocStringExtensions", "Downloads", "FFMPEG", "FileIO", "FixedPointNumbers", "Formatting", "FreeType", "FreeTypeAbstraction", "GeometryBasics", "GridLayoutBase", "ImageIO", "InteractiveUtils", "IntervalSets", "Isoband", "KernelDensity", "LaTeXStrings", "LinearAlgebra", "MacroTools", "MakieCore", "Markdown", "Match", "MathTeXEngine", "MiniQhull", "Observables", "OffsetArrays", "Packing", "PlotUtils", "PolygonOps", "PrecompileTools", "Printf", "REPL", "Random", "RelocatableFolders", "Setfield", "Showoff", "SignedDistanceFields", "SparseArrays", "StableHashTraits", "Statistics", "StatsBase", "StatsFuns", "StructArrays", "TriplotBase", "UnicodeFun"] -git-tree-sha1 = "a6695a632992a2e19ae1a1d0c9bee0e137e2f3cb" +deps = ["Animations", "Base64", "ColorBrewer", "ColorSchemes", "ColorTypes", "Colors", "Contour", "DelaunayTriangulation", "Distributions", "DocStringExtensions", "Downloads", "FFMPEG", "FileIO", "FixedPointNumbers", "Formatting", "FreeType", "FreeTypeAbstraction", "GeometryBasics", "GridLayoutBase", "ImageIO", "InteractiveUtils", "IntervalSets", "Isoband", "KernelDensity", "LaTeXStrings", "LinearAlgebra", "MacroTools", "MakieCore", "Markdown", "Match", "MathTeXEngine", "Observables", "OffsetArrays", "Packing", "PlotUtils", "PolygonOps", "PrecompileTools", "Printf", "REPL", "Random", "RelocatableFolders", "Setfield", "ShaderAbstractions", "Showoff", "SignedDistanceFields", "SparseArrays", "StableHashTraits", "Statistics", "StatsBase", "StatsFuns", "StructArrays", "TriplotBase", "UnicodeFun"] +git-tree-sha1 = "729640354756782c89adba8857085a69e19be7ab" uuid = "ee78f7c6-11fb-53f2-987a-cfe4a2b5a57a" -version = "0.19.6" +version = "0.19.7" [[deps.MakieCore]] deps = ["Observables"] -git-tree-sha1 = "9926529455a331ed73c19ff06d16906737a876ed" +git-tree-sha1 = "87a85ff81583bd392642869557cb633532989517" uuid = "20f20a25-4f0e-4fdf-b5d1-57303727442b" -version = "0.6.3" +version = "0.6.4" [[deps.ManualMemory]] git-tree-sha1 = "bcaef4fc7a0cfe2cba636d84cda54b5e4e4ca3cd" @@ -1208,12 +1270,6 @@ git-tree-sha1 = "a8027af3d1743b3bfae34e54872359fdebb31422" uuid = "9237b28f-5490-5468-be7b-bb81f5f5e6cf" version = "10.1.3+4" -[[deps.MiniQhull]] -deps = ["QhullMiniWrapper_jll"] -git-tree-sha1 = "9dc837d180ee49eeb7c8b77bb1c860452634b0d1" -uuid = "978d7f02-9e05-4691-894f-ae31a51d76ca" -version = "0.4.0" - [[deps.Missings]] deps = ["DataAPI"] git-tree-sha1 = "f66bdc5de519e8f8ae43bdc598782d35a25b1272" @@ -1223,6 +1279,11 @@ version = "1.1.0" [[deps.Mmap]] uuid = "a63ad114-7e13-5084-954f-fe012c677804" +[[deps.Mods]] +git-tree-sha1 = "61be59e4daffff43a8cec04b5e0dc773cbb5db3a" +uuid = "7475f97c-0381-53b1-977b-4c60186c8d62" +version = "1.3.3" + [[deps.MosaicViews]] deps = ["MappedArrays", "OffsetArrays", "PaddedViews", "StackViews"] git-tree-sha1 = "7b86a5d4d70a9f5cdf2dacb3cbe6d251d1a61dbe" @@ -1238,6 +1299,17 @@ git-tree-sha1 = "cac9cc5499c25554cba55cd3c30543cff5ca4fab" uuid = "46d2c3a1-f734-5fdb-9937-b9b9aeba4221" version = "0.2.4" +[[deps.Multisets]] +git-tree-sha1 = "8d852646862c96e226367ad10c8af56099b4047e" +uuid = "3b2b4ff1-bcff-5658-a3ee-dbcf1ce5ac09" +version = "0.4.4" + +[[deps.MutableArithmetics]] +deps = ["LinearAlgebra", "SparseArrays", "Test"] +git-tree-sha1 = "964cb1a7069723727025ae295408747a0b36a854" +uuid = "d8a4904e-b15c-11e9-3269-09a3773c0cb0" +version = "1.3.0" + [[deps.NCDatasets]] deps = ["CFTime", "CommonDataModel", "DataStructures", "Dates", "NetCDF_jll", "NetworkOptions", "Printf"] git-tree-sha1 = "4263c4220f22e20729329838bf7e94a49d1ac32f" @@ -1270,9 +1342,9 @@ version = "400.902.5+1" [[deps.Netpbm]] deps = ["FileIO", "ImageCore", "ImageMetadata"] -git-tree-sha1 = "5ae7ca23e13855b3aba94550f26146c01d259267" +git-tree-sha1 = "d92b107dbb887293622df7697a2223f9f8176fcd" uuid = "f09324ee-3d7c-5217-9330-fc30815ba969" -version = "1.1.0" +version = "1.1.1" [[deps.NetworkOptions]] uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908" @@ -1291,9 +1363,9 @@ version = "0.5.4" [[deps.OffsetArrays]] deps = ["Adapt"] -git-tree-sha1 = "82d7c9e310fe55aa54996e6f7f94674e2a38fcb4" +git-tree-sha1 = "2ac17d29c523ce1cd38e27785a7d23024853a4bb" uuid = "6fe1bfb0-de20-5000-8ca7-80f57d26f881" -version = "1.12.9" +version = "1.12.10" [[deps.Ogg_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1353,6 +1425,12 @@ git-tree-sha1 = "13652491f6856acfd2db29360e1bbcd4565d04f1" uuid = "efe28fd5-8261-553b-a9e1-b2916fc3738e" version = "0.5.5+0" +[[deps.Optim]] +deps = ["Compat", "FillArrays", "ForwardDiff", "LineSearches", "LinearAlgebra", "NLSolversBase", "NaNMath", "Parameters", "PositiveFactorizations", "Printf", "SparseArrays", "StatsBase"] +git-tree-sha1 = "e3a6546c1577bfd701771b477b794a52949e7594" +uuid = "429524aa-4258-5aef-a3af-852621145aeb" +version = "1.7.6" + [[deps.Opus_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] git-tree-sha1 = "51a08fb14ec28da2ec7a927c4337e4332c2a4720" @@ -1360,15 +1438,15 @@ uuid = "91d4177d-7536-5919-b921-800302f37372" version = "1.3.2+0" [[deps.OrderedCollections]] -git-tree-sha1 = "d321bf2de576bf25ec4d3e4360faca399afca282" +git-tree-sha1 = "2e73fe17cac3c62ad1aebe70d44c963c3cfdc3e3" uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" -version = "1.6.0" +version = "1.6.2" [[deps.OrdinaryDiffEq]] deps = ["ADTypes", "Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "IfElse", "InteractiveUtils", "LineSearches", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLNLSolve", "SciMLOperators", "SimpleNonlinearSolve", "SimpleUnPack", "SparseArrays", "SparseDiffTools", "StaticArrayInterface", "StaticArrays", "TruncatedStacktraces"] -git-tree-sha1 = "2aa75defe3eb7fcb0d914c0f7df907dbb8d63d3d" +git-tree-sha1 = "4f1ab68f236fa846d0c30718c6b29c1665b019c0" uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed" -version = "6.53.2" +version = "6.53.3" [[deps.PCRE2_jll]] deps = ["Artifacts", "Libdl"] @@ -1383,9 +1461,15 @@ version = "0.11.17" [[deps.PNGFiles]] deps = ["Base64", "CEnum", "ImageCore", "IndirectArrays", "OffsetArrays", "libpng_jll"] -git-tree-sha1 = "f809158b27eba0c18c269cf2a2be6ed751d3e81d" +git-tree-sha1 = "9b02b27ac477cad98114584ff964e3052f656a0f" uuid = "f57f5aa1-a3ce-4bc8-8ab9-96f992907883" -version = "0.3.17" +version = "0.4.0" + +[[deps.PackageExtensionCompat]] +deps = ["Requires", "TOML"] +git-tree-sha1 = "32f3d52212a8d1c5d589a58851b1f04c97339110" +uuid = "65ce6f38-6b18-4e1d-a461-8949797d7930" +version = "1.0.0" [[deps.Packing]] deps = ["GeometryBasics"] @@ -1411,6 +1495,12 @@ git-tree-sha1 = "4b2e829ee66d4218e0cef22c0a64ee37cf258c29" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" version = "2.7.1" +[[deps.Permutations]] +deps = ["Combinatorics", "LinearAlgebra", "Random"] +git-tree-sha1 = "6e6cab1c54ae2382bcc48866b91cf949cea703a1" +uuid = "2ae35dd2-176d-5d53-8349-f30d82d94d4f" +version = "0.4.16" + [[deps.Pipe]] git-tree-sha1 = "6842804e7867b115ca9de748a0cf6b364523c16d" uuid = "b98c9c47-44ae-5843-9183-064241ee97a0" @@ -1447,15 +1537,15 @@ version = "1.3.5" [[deps.Plots]] deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "UnitfulLatexify", "Unzip"] -git-tree-sha1 = "75ca67b2c6512ad2d0c767a7cfc55e75075f8bbc" +git-tree-sha1 = "9f8675a55b37a70aa23177ec110f6e3f4dd68466" uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" -version = "1.38.16" +version = "1.38.17" [[deps.Polyester]] deps = ["ArrayInterface", "BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "ManualMemory", "PolyesterWeave", "Requires", "Static", "StaticArrayInterface", "StrideArraysCore", "ThreadingUtilities"] -git-tree-sha1 = "0fe4e7c4d8ff4c70bfa507f0dd96fa161b115777" +git-tree-sha1 = "3d811babe092a6e7b130beee84998fe7663348b6" uuid = "f517fe37-dbe3-4b94-8317-1923a5111588" -version = "0.7.3" +version = "0.7.5" [[deps.PolyesterWeave]] deps = ["BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "Static", "ThreadingUtilities"] @@ -1468,6 +1558,18 @@ git-tree-sha1 = "77b3d3605fc1cd0b42d95eba87dfcd2bf67d5ff6" uuid = "647866c9-e3ac-4575-94e7-e3d426903924" version = "0.1.2" +[[deps.Polynomials]] +deps = ["ChainRulesCore", "LinearAlgebra", "MakieCore", "MutableArithmetics", "RecipesBase"] +git-tree-sha1 = "3aa2bb4982e575acd7583f01531f241af077b163" +uuid = "f27b6e38-b328-58d1-80ce-0feddd5e7a45" +version = "3.2.13" + +[[deps.PositiveFactorizations]] +deps = ["LinearAlgebra"] +git-tree-sha1 = "17275485f373e6673f7e7f97051f703ed5b15b20" +uuid = "85a6dd25-e78a-55b7-8502-1745935b8125" +version = "0.2.4" + [[deps.PreallocationTools]] deps = ["Adapt", "ArrayInterface", "ForwardDiff", "Requires"] git-tree-sha1 = "f739b1b3cc7b9949af3b35089931f2b58c289163" @@ -1486,6 +1588,12 @@ git-tree-sha1 = "7eb1686b4f04b82f96ed7a4ea5890a4f0c7a09f1" uuid = "21216c6a-2e73-6563-6e65-726566657250" version = "1.4.0" +[[deps.Primes]] +deps = ["IntegerMathUtils"] +git-tree-sha1 = "4c9f306e5d6603ae203c2000dd460d81a5251489" +uuid = "27ebfcd6-29c5-5fa9-bf4b-fb8fc14df3ae" +version = "0.5.4" + [[deps.Printf]] deps = ["Unicode"] uuid = "de0858da-6303-5e67-8744-51eddeeeb8d7" @@ -1508,23 +1616,11 @@ git-tree-sha1 = "18e8f4d1426e965c7b532ddd260599e1510d26ce" uuid = "4b34888f-f399-49d4-9bb3-47ed5cae4e65" version = "1.0.0" -[[deps.QhullMiniWrapper_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Qhull_jll"] -git-tree-sha1 = "607cf73c03f8a9f83b36db0b86a3a9c14179621f" -uuid = "460c41e3-6112-5d7f-b78c-b6823adb3f2d" -version = "1.0.0+1" - -[[deps.Qhull_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "be2449911f4d6cfddacdf7efc895eceda3eee5c1" -uuid = "784f63db-0788-585a-bace-daefebcd302b" -version = "8.0.1003+0" - -[[deps.Qt5Base_jll]] -deps = ["Artifacts", "CompilerSupportLibraries_jll", "Fontconfig_jll", "Glib_jll", "JLLWrappers", "Libdl", "Libglvnd_jll", "OpenSSL_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libxcb_jll", "Xorg_xcb_util_image_jll", "Xorg_xcb_util_keysyms_jll", "Xorg_xcb_util_renderutil_jll", "Xorg_xcb_util_wm_jll", "Zlib_jll", "xkbcommon_jll"] -git-tree-sha1 = "0c03844e2231e12fda4d0086fd7cbe4098ee8dc5" -uuid = "ea2cea3b-5b76-57ae-a6ef-0a8af62496e1" -version = "5.15.3+2" +[[deps.Qt6Base_jll]] +deps = ["Artifacts", "CompilerSupportLibraries_jll", "Fontconfig_jll", "Glib_jll", "JLLWrappers", "Libdl", "Libglvnd_jll", "OpenSSL_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Xorg_libxcb_jll", "Xorg_xcb_util_image_jll", "Xorg_xcb_util_keysyms_jll", "Xorg_xcb_util_renderutil_jll", "Xorg_xcb_util_wm_jll", "Zlib_jll", "xkbcommon_jll"] +git-tree-sha1 = "364898e8f13f7eaaceec55fd3d08680498c0aa6e" +uuid = "c0090381-4147-56d7-9ebc-da0b1113ec56" +version = "6.4.2+3" [[deps.QuadGK]] deps = ["DataStructures", "LinearAlgebra"] @@ -1577,9 +1673,9 @@ version = "0.6.12" [[deps.RecursiveArrayTools]] deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "Requires", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] -git-tree-sha1 = "02ef02926f30d53b94be443bfaea010c47f6b556" +git-tree-sha1 = "7ed35fb5f831aaf09c2d7c8736d44667a1afdcb0" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "2.38.5" +version = "2.38.7" [[deps.RecursiveFactorization]] deps = ["LinearAlgebra", "LoopVectorization", "Polyester", "SnoopPrecompile", "StrideArraysCore", "TriangularSolve"] @@ -1604,6 +1700,12 @@ git-tree-sha1 = "838a3a4188e2ded87a4f9f184b4b0d78a1e91cb7" uuid = "ae029012-a4dd-5104-9daa-d747884805df" version = "1.3.0" +[[deps.RingLists]] +deps = ["Random"] +git-tree-sha1 = "9712ebc42e91850f35272b48eb840e60c0270ec0" +uuid = "286e9d63-9694-5540-9e3c-4e6708fa07b2" +version = "0.2.7" + [[deps.Rmath]] deps = ["Random", "Rmath_jll"] git-tree-sha1 = "f65dcb5fa46aee0cf9ed6274ccbd597adc49aa7b" @@ -1622,6 +1724,11 @@ git-tree-sha1 = "9fb3462240d2898be5d4acf8925e47f70ec64d07" uuid = "7181ea78-2dcb-4de3-ab41-2b8ab5a31e74" version = "0.3.5" +[[deps.RoundingEmulator]] +git-tree-sha1 = "40b9edad2e5287e05bd413a38f61a8ff55b9557b" +uuid = "5eaf0fd0-dfba-4ccb-bf02-d820a40db705" +version = "0.2.1" + [[deps.RuntimeGeneratedFunctions]] deps = ["ExprTools", "SHA", "Serialization"] git-tree-sha1 = "237edc1563bbf078629b4f8d194bd334e97907cf" @@ -1651,15 +1758,15 @@ version = "0.6.39" [[deps.ScanByte]] deps = ["Libdl", "SIMD"] -git-tree-sha1 = "2436b15f376005e8790e318329560dcc67188e84" +git-tree-sha1 = "d49e35f413186528f1d7cc675e67d0ed16fd7800" uuid = "7b38b023-a4d7-4c5e-8d43-3f3097f304eb" -version = "0.3.3" +version = "0.4.0" [[deps.SciMLBase]] deps = ["ADTypes", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] -git-tree-sha1 = "a22a12db91f6a921e28a7ae39a9546eed93fd92e" +git-tree-sha1 = "04370090604cd399db5bebddb636d80ab9d338e9" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "1.93.0" +version = "1.94.0" [[deps.SciMLNLSolve]] deps = ["DiffEqBase", "LineSearches", "NLsolve", "Reexport", "SciMLBase"] @@ -1669,9 +1776,9 @@ version = "0.1.8" [[deps.SciMLOperators]] deps = ["ArrayInterface", "DocStringExtensions", "Lazy", "LinearAlgebra", "Setfield", "SparseArrays", "StaticArraysCore", "Tricks"] -git-tree-sha1 = "6a657a73322170eec86fb427661dbee079b85bff" +git-tree-sha1 = "745755a5b932c9a664d7e9e4beb60c692b211d4b" uuid = "c0aeaf25-5076-4817-a8d5-81caf7dfa961" -version = "0.2.12" +version = "0.3.5" [[deps.Scratch]] deps = ["Dates"] @@ -1682,12 +1789,23 @@ version = "1.2.0" [[deps.Serialization]] uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b" +[[deps.SetRounding]] +git-tree-sha1 = "d7a25e439d07a17b7cdf97eecee504c50fedf5f6" +uuid = "3cc68bcd-71a2-5612-b932-767ffbe40ab0" +version = "0.2.1" + [[deps.Setfield]] deps = ["ConstructionBase", "Future", "MacroTools", "StaticArraysCore"] git-tree-sha1 = "e2cc6d8c88613c05e1defb55170bf5ff211fbeac" uuid = "efcf1570-3423-57d1-acb7-fd33fddbac46" version = "1.1.1" +[[deps.ShaderAbstractions]] +deps = ["ColorTypes", "FixedPointNumbers", "GeometryBasics", "LinearAlgebra", "Observables", "StaticArrays", "StructArrays", "Tables"] +git-tree-sha1 = "0d15c3e7b2003f4451714f08ffec2b77badc2dc4" +uuid = "65257c39-d410-5151-9873-9b3e5be5013e" +version = "0.3.0" + [[deps.SharedArrays]] deps = ["Distributed", "Mmap", "Random", "Serialization"] uuid = "1a1011a3-84de-559e-8e89-a11a2f7dc383" @@ -1709,11 +1827,35 @@ git-tree-sha1 = "874e8867b33a00e784c8a7e4b60afe9e037b74e1" uuid = "777ac1f9-54b0-4bf8-805c-2214025038e7" version = "1.1.0" +[[deps.SimpleGraphs]] +deps = ["AbstractLattices", "Combinatorics", "DataStructures", "IterTools", "LightXML", "LinearAlgebra", "LinearAlgebraX", "Optim", "Primes", "Random", "RingLists", "SimplePartitions", "SimplePolynomials", "SimpleRandom", "SparseArrays", "Statistics"] +git-tree-sha1 = "b608903049d11cc557c45e03b3a53e9260579c19" +uuid = "55797a34-41de-5266-9ec1-32ac4eb504d3" +version = "0.8.4" + [[deps.SimpleNonlinearSolve]] -deps = ["ArrayInterface", "DiffEqBase", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "PrecompileTools", "Reexport", "Requires", "SciMLBase", "StaticArraysCore"] -git-tree-sha1 = "56aa73a93cdca493af5155a0338a864ed314222b" +deps = ["ArrayInterface", "DiffEqBase", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "PackageExtensionCompat", "PrecompileTools", "Reexport", "SciMLBase", "StaticArraysCore"] +git-tree-sha1 = "91fcc402c4ab978ad5759489db9a9c5a71732f2d" uuid = "727e6d20-b764-4bd8-a329-72de5adea6c7" -version = "0.1.16" +version = "0.1.18" + +[[deps.SimplePartitions]] +deps = ["AbstractLattices", "DataStructures", "Permutations"] +git-tree-sha1 = "dcc02923a53f316ab97da8ef3136e80b4543dbf1" +uuid = "ec83eff0-a5b5-5643-ae32-5cbf6eedec9d" +version = "0.3.0" + +[[deps.SimplePolynomials]] +deps = ["Mods", "Multisets", "Polynomials", "Primes"] +git-tree-sha1 = "d073c45302132b324ca653e1053966b4beacc2a5" +uuid = "cc47b68c-3164-5771-a705-2bc0097375a0" +version = "0.2.11" + +[[deps.SimpleRandom]] +deps = ["Distributions", "LinearAlgebra", "Random"] +git-tree-sha1 = "3a6fb395e37afab81aeea85bae48a4db5cd7244a" +uuid = "a6525b86-64cd-54fa-8f65-62fc48bdc0e8" +version = "0.3.1" [[deps.SimpleTraits]] deps = ["InteractiveUtils", "MacroTools"] @@ -1728,9 +1870,9 @@ version = "1.1.0" [[deps.Sixel]] deps = ["Dates", "FileIO", "ImageCore", "IndirectArrays", "OffsetArrays", "REPL", "libsixel_jll"] -git-tree-sha1 = "8fb59825be681d451c246a795117f317ecbcaa28" +git-tree-sha1 = "2da10356e31327c7096832eb9cd86307a50b1eb6" uuid = "45858cf5-a6b0-47a3-bbea-62219f50df47" -version = "0.1.2" +version = "0.1.3" [[deps.SnoopPrecompile]] deps = ["Preferences"] @@ -1783,9 +1925,9 @@ version = "0.1.1" [[deps.Static]] deps = ["IfElse"] -git-tree-sha1 = "dbde6766fc677423598138a5951269432b0fcc90" +git-tree-sha1 = "f295e0a1da4ca425659c57441bcb59abb035a4bc" uuid = "aedffcd0-7271-4cad-89d0-dc628f76c6d3" -version = "0.8.7" +version = "0.8.8" [[deps.StaticArrayInterface]] deps = ["ArrayInterface", "Compat", "IfElse", "LinearAlgebra", "Requires", "SnoopPrecompile", "SparseArrays", "Static", "SuiteSparse"] @@ -1795,14 +1937,14 @@ version = "1.4.0" [[deps.StaticArrays]] deps = ["LinearAlgebra", "Random", "StaticArraysCore", "Statistics"] -git-tree-sha1 = "832afbae2a45b4ae7e831f86965469a24d1d8a83" +git-tree-sha1 = "9cabadf6e7cd2349b6cf49f1915ad2028d65e881" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.5.26" +version = "1.6.2" [[deps.StaticArraysCore]] -git-tree-sha1 = "6b7ba252635a5eff6a0b0664a41ee140a1c9e72a" +git-tree-sha1 = "36b3d696ce6366023a0ea192b4cd442268995a0d" uuid = "1e83bf80-4336-4d27-bf5d-d5a4f845583c" -version = "1.4.0" +version = "1.4.2" [[deps.Statistics]] deps = ["LinearAlgebra", "SparseArrays"] @@ -1828,15 +1970,15 @@ version = "1.3.0" [[deps.StrideArraysCore]] deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "ManualMemory", "SIMDTypes", "Static", "StaticArrayInterface", "ThreadingUtilities"] -git-tree-sha1 = "602a8bef17c744f1de965979398597dfa50e1a2f" +git-tree-sha1 = "f02eb61eb5c97b48c153861c72fbbfdddc607e06" uuid = "7792a7ef-975c-4747-a70f-980b88e8d1da" -version = "0.4.15" +version = "0.4.17" [[deps.StringEncodings]] deps = ["Libiconv_jll"] -git-tree-sha1 = "33c0da881af3248dafefb939a21694b97cfece76" +git-tree-sha1 = "b765e46ba27ecf6b44faf70df40c57aa3a547dcb" uuid = "69024149-9ee7-55f6-a4c4-859efe599b68" -version = "0.3.6" +version = "0.3.7" [[deps.StructArrays]] deps = ["Adapt", "DataAPI", "GPUArraysCore", "StaticArraysCore", "Tables"] @@ -1905,9 +2047,9 @@ uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40" [[deps.ThreadingUtilities]] deps = ["ManualMemory"] -git-tree-sha1 = "c97f60dd4f2331e1a495527f80d242501d2f9865" +git-tree-sha1 = "eda08f7e9818eb53661b3deb74e3159460dfbc27" uuid = "8290d209-cae3-49c0-8002-c8c24d57dab5" -version = "0.5.1" +version = "0.5.2" [[deps.TiffImages]] deps = ["ColorTypes", "DataStructures", "DocStringExtensions", "FileIO", "FixedPointNumbers", "IndirectArrays", "Inflate", "Mmap", "OffsetArrays", "PkgVersion", "ProgressMeter", "UUIDs"] @@ -1945,9 +2087,9 @@ version = "0.1.0" [[deps.TruncatedStacktraces]] deps = ["InteractiveUtils", "MacroTools", "Preferences"] -git-tree-sha1 = "7bc1632a4eafbe9bd94cf1a784a9a4eb5e040a91" +git-tree-sha1 = "ea3e54c2bdde39062abf5a9758a23735558705e1" uuid = "781d530d-4396-4725-bb49-402e4bee1e77" -version = "1.3.0" +version = "1.4.0" [[deps.TupleTools]] git-tree-sha1 = "3c712976c47707ff893cf6ba4354aa14db1d8938" @@ -1978,10 +2120,10 @@ uuid = "1cfade01-22cf-5700-b092-accc4b62d6e1" version = "0.4.1" [[deps.Unitful]] -deps = ["ConstructionBase", "Dates", "LinearAlgebra", "Random"] -git-tree-sha1 = "ba4aa36b2d5c98d6ed1f149da916b3ba46527b2b" +deps = ["ConstructionBase", "Dates", "InverseFunctions", "LinearAlgebra", "Random"] +git-tree-sha1 = "c4d2a349259c8eba66a00a540d550f122a3ab228" uuid = "1986cc42-f94f-5a68-af5c-568840ba703d" -version = "1.14.0" +version = "1.15.0" [[deps.UnitfulLatexify]] deps = ["LaTeXStrings", "Latexify", "Unitful"] @@ -1996,9 +2138,9 @@ version = "0.2.1" [[deps.UnsafeAtomicsLLVM]] deps = ["LLVM", "UnsafeAtomics"] -git-tree-sha1 = "ea37e6066bf194ab78f4e747f5245261f17a7175" +git-tree-sha1 = "323e3d0acf5e78a56dfae7bd8928c989b4f3083e" uuid = "d80eeb9a-aca5-4d75-85e5-170c8b632249" -version = "0.1.2" +version = "0.1.3" [[deps.Unzip]] git-tree-sha1 = "ca0969166a028236229f63514992fc073799bb78" @@ -2058,17 +2200,23 @@ git-tree-sha1 = "91844873c4085240b95e795f692c4cec4d805f8a" uuid = "aed1982a-8fda-507f-9586-7b0439959a61" version = "1.1.34+0" +[[deps.XZ_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "2222b751598bd9f4885c9ce9cd23e83404baa8ce" +uuid = "ffd25f8a-64ca-5728-b0f7-c24cf3aae800" +version = "5.4.3+1" + [[deps.Xorg_libX11_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libxcb_jll", "Xorg_xtrans_jll"] -git-tree-sha1 = "5be649d550f3f4b95308bf0183b82e2582876527" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libxcb_jll", "Xorg_xtrans_jll"] +git-tree-sha1 = "afead5aba5aa507ad5a3bf01f58f82c8d1403495" uuid = "4f6342f7-b3d2-589e-9d20-edeb45f2b2bc" -version = "1.6.9+4" +version = "1.8.6+0" [[deps.Xorg_libXau_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "4e490d5c960c314f33885790ed410ff3a94ce67e" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "6035850dcc70518ca32f012e46015b9beeda49d8" uuid = "0c0b7dd1-d40b-584c-a123-a41640f87eec" -version = "1.0.9+4" +version = "1.0.11+0" [[deps.Xorg_libXcursor_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libXfixes_jll", "Xorg_libXrender_jll"] @@ -2077,10 +2225,10 @@ uuid = "935fb764-8cf2-53bf-bb30-45bb1f8bf724" version = "1.2.0+4" [[deps.Xorg_libXdmcp_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "4fe47bd2247248125c428978740e18a681372dd4" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "34d526d318358a859d7de23da945578e8e8727b7" uuid = "a3789734-cfe1-5b06-b2d0-1dd0d9d62d05" -version = "1.1.3+4" +version = "1.1.4+0" [[deps.Xorg_libXext_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libX11_jll"] @@ -2119,22 +2267,22 @@ uuid = "ea2f1a96-1ddc-540d-b46f-429655e07cfa" version = "0.9.10+4" [[deps.Xorg_libpthread_stubs_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "6783737e45d3c59a4a4c4091f5f88cdcf0908cbb" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "8fdda4c692503d44d04a0603d9ac0982054635f9" uuid = "14d82f49-176c-5ed1-bb49-ad3f5cbd8c74" -version = "0.1.0+3" +version = "0.1.1+0" [[deps.Xorg_libxcb_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "XSLT_jll", "Xorg_libXau_jll", "Xorg_libXdmcp_jll", "Xorg_libpthread_stubs_jll"] -git-tree-sha1 = "daf17f441228e7a3833846cd048892861cff16d6" +deps = ["Artifacts", "JLLWrappers", "Libdl", "XSLT_jll", "Xorg_libXau_jll", "Xorg_libXdmcp_jll", "Xorg_libpthread_stubs_jll"] +git-tree-sha1 = "b4bfde5d5b652e22b9c790ad00af08b6d042b97d" uuid = "c7cfdc94-dc32-55de-ac96-5a1b8d977c5b" -version = "1.13.0+3" +version = "1.15.0+0" [[deps.Xorg_libxkbfile_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libX11_jll"] -git-tree-sha1 = "926af861744212db0eb001d9e40b5d16292080b2" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libX11_jll"] +git-tree-sha1 = "730eeca102434283c50ccf7d1ecdadf521a765a4" uuid = "cc61e674-0454-545c-8b26-ed2c68acab7a" -version = "1.1.0+4" +version = "1.1.2+0" [[deps.Xorg_xcb_util_image_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_xcb_util_jll"] @@ -2167,22 +2315,22 @@ uuid = "c22f9ab0-d5fe-5066-847c-f4bb1cd4e361" version = "0.4.1+1" [[deps.Xorg_xkbcomp_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libxkbfile_jll"] -git-tree-sha1 = "4bcbf660f6c2e714f87e960a171b119d06ee163b" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libxkbfile_jll"] +git-tree-sha1 = "330f955bc41bb8f5270a369c473fc4a5a4e4d3cb" uuid = "35661453-b289-5fab-8a00-3d9160c6a3a4" -version = "1.4.2+4" +version = "1.4.6+0" [[deps.Xorg_xkeyboard_config_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_xkbcomp_jll"] -git-tree-sha1 = "5c8424f8a67c3f2209646d4425f3d415fee5931d" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_xkbcomp_jll"] +git-tree-sha1 = "691634e5453ad362044e2ad653e79f3ee3bb98c3" uuid = "33bec58e-1273-512f-9401-5d533626f822" -version = "2.27.0+4" +version = "2.39.0+0" [[deps.Xorg_xtrans_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "79c31e7844f6ecf779705fbc12146eb190b7d845" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "e92a1a012a10506618f10b7047e478403a046c77" uuid = "c5fb5394-a638-5e4d-96e5-b29de1b5cf10" -version = "1.4.0+3" +version = "1.5.0+0" [[deps.YAML]] deps = ["Base64", "Dates", "Printf", "StringEncodings"] diff --git a/examples/Manifest.toml b/examples/Manifest.toml index 8392af555f..591028f0e1 100644 --- a/examples/Manifest.toml +++ b/examples/Manifest.toml @@ -2,7 +2,12 @@ julia_version = "1.8.5" manifest_format = "2.0" -project_hash = "f746053921db857e973f5d1c29d61b04a6de25bc" +project_hash = "b57fd64bd6a9d56274ef268a3ef186cce6be809f" + +[[deps.ADTypes]] +git-tree-sha1 = "f5c25e8a5b29b5e941b7408bc8cc79fea4d9ef9a" +uuid = "47edcb42-4c32-4615-8424-f2b9edc5f35b" +version = "0.1.6" [[deps.AMD]] deps = ["Libdl", "LinearAlgebra", "SparseArrays", "Test"] @@ -12,9 +17,9 @@ version = "0.5.0" [[deps.AbstractFFTs]] deps = ["ChainRulesCore", "LinearAlgebra"] -git-tree-sha1 = "16b6dbc4cf7caee4e1e75c49485ec67b667098a0" +git-tree-sha1 = "cad4c758c0038eea30394b1b671526921ca85b21" uuid = "621f4979-c628-5d54-868e-fcf4e3e8185c" -version = "1.3.1" +version = "1.4.0" [[deps.AbstractTrees]] git-tree-sha1 = "faa260e4cb5aba097a73fab382dd4b5819d8ec8c" @@ -43,10 +48,10 @@ uuid = "ec485272-7323-5ecc-a04f-4719b315124d" version = "0.2.0" [[deps.ArrayInterface]] -deps = ["Compat", "IfElse", "LinearAlgebra", "Requires", "SparseArrays", "Static"] -git-tree-sha1 = "1ee88c4c76caa995a885dc2f22a5d548dfbbc0ba" +deps = ["Adapt", "LinearAlgebra", "Requires", "SparseArrays", "SuiteSparse"] +git-tree-sha1 = "f83ec24f76d4c8f525099b2ac475fc098138ec31" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "3.2.2" +version = "7.4.11" [[deps.ArrayInterfaceCore]] deps = ["LinearAlgebra", "SnoopPrecompile", "SparseArrays", "SuiteSparse"] @@ -54,18 +59,6 @@ git-tree-sha1 = "e5f08b5689b1aad068e01751889f2f615c7db36d" uuid = "30b0a656-2188-435a-8636-2ec0e6a096e2" version = "0.1.29" -[[deps.ArrayInterfaceGPUArrays]] -deps = ["Adapt", "ArrayInterfaceCore", "GPUArraysCore", "LinearAlgebra"] -git-tree-sha1 = "fc114f550b93d4c79632c2ada2924635aabfa5ed" -uuid = "6ba088a2-8465-4c0a-af30-387133b534db" -version = "0.2.2" - -[[deps.ArrayInterfaceStaticArraysCore]] -deps = ["ArrayInterfaceCore", "LinearAlgebra", "StaticArraysCore"] -git-tree-sha1 = "01a9f8e6cfc2bfdd01d333f70b8014a04893103c" -uuid = "dd5226c6-a4d4-4bc7-8575-46859f9c95b9" -version = "0.1.4" - [[deps.ArrayLayouts]] deps = ["FillArrays", "LinearAlgebra", "SparseArrays"] git-tree-sha1 = "4aff5fa660eb95c2e0deb6bcdabe4d9a96bc4667" @@ -148,16 +141,16 @@ uuid = "179af706-886a-5703-950a-314cd64e0468" version = "0.1.2" [[deps.CPUSummary]] -deps = ["CpuId", "IfElse", "Static"] -git-tree-sha1 = "a7157ab6bcda173f533db4c93fc8a27a48843757" +deps = ["CpuId", "IfElse", "PrecompileTools", "Static"] +git-tree-sha1 = "89e0654ed8c7aebad6d5ad235d6242c2d737a928" uuid = "2a0fbf3d-bb9c-48f3-b0a9-814d99fd7ab9" -version = "0.1.30" +version = "0.2.3" [[deps.CUDA]] -deps = ["AbstractFFTs", "Adapt", "BFloat16s", "CEnum", "CUDA_Driver_jll", "CUDA_Runtime_Discovery", "CUDA_Runtime_jll", "CompilerSupportLibraries_jll", "ExprTools", "GPUArrays", "GPUCompiler", "KernelAbstractions", "LLVM", "LazyArtifacts", "Libdl", "LinearAlgebra", "Logging", "Preferences", "Printf", "Random", "Random123", "RandomNumbers", "Reexport", "Requires", "SparseArrays", "SpecialFunctions", "UnsafeAtomicsLLVM"] -git-tree-sha1 = "442d989978ed3ff4e174c928ee879dc09d1ef693" +deps = ["AbstractFFTs", "Adapt", "BFloat16s", "CEnum", "CUDA_Driver_jll", "CUDA_Runtime_Discovery", "CUDA_Runtime_jll", "ExprTools", "GPUArrays", "GPUCompiler", "KernelAbstractions", "LLVM", "LazyArtifacts", "Libdl", "LinearAlgebra", "Logging", "Preferences", "Printf", "Random", "Random123", "RandomNumbers", "Reexport", "Requires", "SparseArrays", "SpecialFunctions", "UnsafeAtomicsLLVM"] +git-tree-sha1 = "35160ef0f03b14768abfd68b830f8e3940e8e0dc" uuid = "052768ef-5323-5732-b1bb-66c8b64840ba" -version = "4.3.2" +version = "4.4.0" [[deps.CUDA_Driver_jll]] deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "Pkg"] @@ -196,22 +189,22 @@ uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" version = "1.16.0" [[deps.ChangesOfVariables]] -deps = ["LinearAlgebra", "Test"] -git-tree-sha1 = "f84967c4497e0e1955f9a582c232b02847c5f589" +deps = ["InverseFunctions", "LinearAlgebra", "Test"] +git-tree-sha1 = "2fba81a302a7be671aefe194f0525ef231104e7f" uuid = "9e997f8a-9a97-42d5-a9f1-ce6bfc15e2c0" -version = "0.1.7" +version = "0.1.8" [[deps.ClimaComms]] deps = ["CUDA", "MPI"] -git-tree-sha1 = "483971be380aefef7d576797508c7f3159c39775" +git-tree-sha1 = "6cbe1b835f91033e6326a92ac1a1f6a8c9b2215f" uuid = "3a4d1b5c-c61d-41fd-a00a-5873ba7a1b0d" -version = "0.5.0" +version = "0.5.3" [[deps.ClimaCore]] deps = ["Adapt", "BandedMatrices", "BlockArrays", "CUDA", "ClimaComms", "CubedSphere", "DataStructures", "DiffEqBase", "DocStringExtensions", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "LinearAlgebra", "PkgVersion", "RecursiveArrayTools", "Requires", "RootSolvers", "SparseArrays", "Static", "StaticArrays", "Statistics", "UnPack"] path = ".." uuid = "d414da3d-4745-48bb-8d80-42e94e092884" -version = "0.10.42" +version = "0.10.46" [[deps.ClimaCorePlots]] deps = ["ClimaCore", "RecipesBase", "StaticArrays", "TriplotBase"] @@ -238,22 +231,22 @@ uuid = "595c0a79-7f3d-439a-bc5a-b232dc3bde79" version = "0.7.7" [[deps.CloseOpenIntervals]] -deps = ["ArrayInterface", "Static"] -git-tree-sha1 = "d61300b9895f129f4bd684b2aff97cf319b6c493" +deps = ["Static", "StaticArrayInterface"] +git-tree-sha1 = "70232f82ffaab9dc52585e0dd043b5e0c6b714f1" uuid = "fb6a15b2-703c-40df-9091-08a04967cfa9" -version = "0.1.11" +version = "0.1.12" [[deps.CodecZlib]] deps = ["TranscodingStreams", "Zlib_jll"] -git-tree-sha1 = "9c209fb7536406834aa938fb149964b985de6c83" +git-tree-sha1 = "02aa26a4cf76381be7f66e020a3eddeb27b0a092" uuid = "944b1d66-785c-5afd-91f1-9de20f533193" -version = "0.7.1" +version = "0.7.2" [[deps.ColorSchemes]] deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "PrecompileTools", "Random"] -git-tree-sha1 = "be6ab11021cd29f0344d5c4357b163af05a48cba" +git-tree-sha1 = "dd3000d954d483c1aad05fe1eb9e6a715c97013e" uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4" -version = "3.21.0" +version = "3.22.0" [[deps.ColorTypes]] deps = ["FixedPointNumbers", "Random"] @@ -262,10 +255,10 @@ uuid = "3da002f7-5984-5a60-b8a6-cbb66c0b333f" version = "0.11.4" [[deps.ColorVectorSpace]] -deps = ["ColorTypes", "FixedPointNumbers", "LinearAlgebra", "SpecialFunctions", "Statistics", "TensorCore"] -git-tree-sha1 = "600cc5508d66b78aae350f7accdb58763ac18589" +deps = ["ColorTypes", "FixedPointNumbers", "LinearAlgebra", "Requires", "Statistics", "TensorCore"] +git-tree-sha1 = "a1f44953f2382ebb937d60dafbe2deea4bd23249" uuid = "c3611d14-8923-5661-9e6a-0046d554d3a4" -version = "0.9.10" +version = "0.10.0" [[deps.Colors]] deps = ["ColorTypes", "FixedPointNumbers", "Reexport"] @@ -291,10 +284,10 @@ uuid = "bbf7d656-a473-5ed7-a52c-81e309532950" version = "0.3.0" [[deps.Compat]] -deps = ["Base64", "Dates", "DelimitedFiles", "Distributed", "InteractiveUtils", "LibGit2", "Libdl", "LinearAlgebra", "Markdown", "Mmap", "Pkg", "Printf", "REPL", "Random", "SHA", "Serialization", "SharedArrays", "Sockets", "SparseArrays", "Statistics", "Test", "UUIDs", "Unicode"] -git-tree-sha1 = "6c0100a8cf4ed66f66e2039af7cde3357814bad2" +deps = ["Dates", "LinearAlgebra", "UUIDs"] +git-tree-sha1 = "5ce999a19f4ca23ea484e92a1774a61b8ca4cf8e" uuid = "34da2185-b29b-5c13-b0c7-acf172513d20" -version = "3.46.2" +version = "4.8.0" [[deps.CompilerSupportLibraries_jll]] deps = ["Artifacts", "Libdl"] @@ -313,15 +306,15 @@ version = "0.1.2" [[deps.ConcurrentUtilities]] deps = ["Serialization", "Sockets"] -git-tree-sha1 = "96d823b94ba8d187a6d8f0826e731195a74b90e9" +git-tree-sha1 = "5372dbbf8f0bdb8c700db5367132925c0771ef7e" uuid = "f0e56b4a-5159-44fe-b623-3e5288b988bb" -version = "2.2.0" +version = "2.2.1" [[deps.ConstructionBase]] deps = ["LinearAlgebra"] -git-tree-sha1 = "738fec4d684a9a6ee9598a8bfee305b26831f28c" +git-tree-sha1 = "fe2838a593b5f776e1597e086dcd47560d94e816" uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9" -version = "1.5.2" +version = "1.5.3" [[deps.Contour]] git-tree-sha1 = "d05d9e7b7aedff4e5b51a029dced05cfb6125781" @@ -340,12 +333,6 @@ git-tree-sha1 = "131498c78453d02b4821d8b93f6e44595399f19f" uuid = "7445602f-e544-4518-8976-18f8e8ae6cdb" version = "0.2.3" -[[deps.DEDataArrays]] -deps = ["ArrayInterface", "DocStringExtensions", "LinearAlgebra", "RecursiveArrayTools", "SciMLBase", "StaticArrays"] -git-tree-sha1 = "fb2693e875ba9db2e64b684b2765e210c0d41231" -uuid = "754358af-613d-5f8d-9788-280bf1605d4c" -version = "0.2.4" - [[deps.DataAPI]] git-tree-sha1 = "8da84edb865b0b5b0100c0666a9bc9a0b71c553c" uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a" @@ -353,9 +340,9 @@ version = "1.15.0" [[deps.DataStructures]] deps = ["Compat", "InteractiveUtils", "OrderedCollections"] -git-tree-sha1 = "d1fff3a548102f48987a52a2e0d114fa97d730f0" +git-tree-sha1 = "cf25ccb972fec4e4817764d01c82386ae94f77b4" uuid = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8" -version = "0.18.13" +version = "0.18.14" [[deps.DataValueInterfaces]] git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6" @@ -382,10 +369,10 @@ uuid = "b429d917-457f-4dbc-8f4c-0cc954292b1d" version = "0.4.0" [[deps.DiffEqBase]] -deps = ["ArrayInterface", "ChainRulesCore", "DEDataArrays", "DataStructures", "Distributions", "DocStringExtensions", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "IterativeSolvers", "LabelledArrays", "LinearAlgebra", "Logging", "MuladdMacro", "NonlinearSolve", "Parameters", "PreallocationTools", "Printf", "RecursiveArrayTools", "RecursiveFactorization", "Reexport", "Requires", "SciMLBase", "Setfield", "SparseArrays", "StaticArrays", "Statistics", "SuiteSparse", "ZygoteRules"] -git-tree-sha1 = "bd3812f2be255da87a2438c3b87a0a478cdbd050" +deps = ["ArrayInterface", "ChainRulesCore", "DataStructures", "Distributions", "DocStringExtensions", "EnumX", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "Printf", "RecursiveArrayTools", "Reexport", "Requires", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces", "ZygoteRules"] +git-tree-sha1 = "c5692436e7f8279503466db216c74165d1b301e4" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.84.0" +version = "6.127.0" [[deps.DiffEqCallbacks]] deps = ["DataStructures", "DiffEqBase", "ForwardDiff", "LinearAlgebra", "Markdown", "NLsolve", "Parameters", "RecipesBase", "RecursiveArrayTools", "SciMLBase", "StaticArraysCore"] @@ -395,9 +382,9 @@ version = "2.26.1" [[deps.DiffEqOperators]] deps = ["BandedMatrices", "BlockBandedMatrices", "DiffEqBase", "DomainSets", "ForwardDiff", "LazyArrays", "LazyBandedMatrices", "LinearAlgebra", "LoopVectorization", "NNlib", "Requires", "RuntimeGeneratedFunctions", "SciMLBase", "SparseArrays", "SparseDiffTools", "StaticArrays", "SuiteSparse"] -git-tree-sha1 = "8fec548f61267eb0d04501d3f33e904aeb123b85" +git-tree-sha1 = "ef0f24d69406bf85092c843691ab2ae3b2e34b77" uuid = "9fdde737-9c7f-55bf-ade8-46b3f136cc48" -version = "4.44.0" +version = "4.45.0" [[deps.DiffResults]] deps = ["StaticArraysCore"] @@ -413,9 +400,9 @@ version = "1.15.1" [[deps.Distances]] deps = ["LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI"] -git-tree-sha1 = "49eba9ad9f7ead780bfb7ee319f962c811c6d3b2" +git-tree-sha1 = "b6def76ffad15143924a2199f72a5cd883a2e8a9" uuid = "b4f34e82-e78d-54a5-968a-f98e89d6e8f7" -version = "0.10.8" +version = "0.10.9" [[deps.Distributed]] deps = ["Random", "Serialization", "Sockets"] @@ -423,15 +410,15 @@ uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[deps.Distributions]] deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "Test"] -git-tree-sha1 = "4ed4a6df2548a72f66e03f3a285cd1f3b573035d" +git-tree-sha1 = "e76a3281de2719d7c81ed62c6ea7057380c87b1d" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.96" +version = "0.25.98" [[deps.DocStringExtensions]] deps = ["LibGit2"] -git-tree-sha1 = "b19534d1895d702889b219c382a6e18010797f0b" +git-tree-sha1 = "2fb1e02f2b635d0845df5d7c167fec4dd739b00d" uuid = "ffbed154-4ef7-542d-bbb7-c09d3a79fcae" -version = "0.8.6" +version = "0.9.3" [[deps.DomainSets]] deps = ["CompositeTypes", "IntervalSets", "LinearAlgebra", "Random", "StaticArrays", "Statistics"] @@ -455,6 +442,11 @@ git-tree-sha1 = "71c79e77221ab3a29918aaf6db4f217b89138608" uuid = "b305315f-e792-5b7a-8f41-49f472929428" version = "1.0.1" +[[deps.EnumX]] +git-tree-sha1 = "bdb1942cd4c45e3c678fd11569d5cccd80976237" +uuid = "4e289a0a-7415-4d19-859d-a7e5c4648b56" +version = "1.0.4" + [[deps.ExceptionUnwrapping]] deps = ["Test"] git-tree-sha1 = "e90caa41f5a86296e014e148ee061bd6c3edec96" @@ -468,15 +460,15 @@ uuid = "2e619515-83b5-522b-bb60-26c02a35a201" version = "2.5.0+0" [[deps.ExponentialUtilities]] -deps = ["Adapt", "ArrayInterfaceCore", "ArrayInterfaceGPUArrays", "GPUArraysCore", "GenericSchur", "LinearAlgebra", "Printf", "SnoopPrecompile", "SparseArrays", "libblastrampoline_jll"] -git-tree-sha1 = "eb58c1e1417a6580b983069f1491ff82c37def2c" +deps = ["Adapt", "ArrayInterface", "GPUArraysCore", "GenericSchur", "LinearAlgebra", "Printf", "SnoopPrecompile", "SparseArrays", "libblastrampoline_jll"] +git-tree-sha1 = "fb7dbef7d2631e2d02c49e2750f7447648b0ec9b" uuid = "d4d017d3-3776-5f7e-afef-a10c40355c18" -version = "1.23.0" +version = "1.24.0" [[deps.ExprTools]] -git-tree-sha1 = "c1d06d129da9f55715c6c212866f5b1bddc5fa00" +git-tree-sha1 = "27415f162e6028e81c72b82ef756bf321213b6ec" uuid = "e2ba6199-217a-4e67-a87a-7c52f15ade04" -version = "0.1.9" +version = "0.1.10" [[deps.FFMPEG]] deps = ["FFMPEG_jll"] @@ -503,16 +495,22 @@ uuid = "f5851436-0d7a-5f13-b9de-f02708fd171a" version = "3.3.10+0" [[deps.FastBroadcast]] -deps = ["LinearAlgebra", "Polyester", "Static", "StrideArraysCore"] -git-tree-sha1 = "2bef6a96059e40dcf7a69c39506672d551fee983" +deps = ["ArrayInterface", "LinearAlgebra", "Polyester", "Static", "StaticArrayInterface", "StrideArraysCore"] +git-tree-sha1 = "aa9925a229d45fe3018715238956766fa21804d1" uuid = "7034ab61-46d4-4ed7-9d0f-46aef9175898" -version = "0.1.17" +version = "0.2.6" [[deps.FastClosures]] git-tree-sha1 = "acebe244d53ee1b461970f8910c235b259e772ef" uuid = "9aa1b823-49e4-5ca5-8b0f-3971ec8bab6a" version = "0.3.2" +[[deps.FastLapackInterface]] +deps = ["LinearAlgebra"] +git-tree-sha1 = "c1293a93193f0ae94be7cf338d33e162c39d8788" +uuid = "29a986be-02c6-4525-aec4-84b980013641" +version = "1.2.9" + [[deps.FileIO]] deps = ["Pkg", "Requires", "UUIDs"] git-tree-sha1 = "299dc33549f68299137e51e6d49a13b5b1da9673" @@ -529,10 +527,10 @@ uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" version = "0.13.11" [[deps.FiniteDiff]] -deps = ["ArrayInterfaceCore", "LinearAlgebra", "Requires", "Setfield", "SparseArrays", "StaticArrays"] -git-tree-sha1 = "04ed1f0029b6b3af88343e439b995141cb0d0b8d" +deps = ["ArrayInterface", "LinearAlgebra", "Requires", "Setfield", "SparseArrays", "StaticArrays"] +git-tree-sha1 = "c6e4a1fbe73b31a3dea94b1da449503b8830c306" uuid = "6a86dc24-6348-571c-b903-95158fe2bd41" -version = "2.17.0" +version = "2.21.1" [[deps.FixedPointNumbers]] deps = ["Statistics"] @@ -559,10 +557,10 @@ uuid = "f6369f11-7733-5829-9624-2563aa707210" version = "0.10.35" [[deps.FreeType2_jll]] -deps = ["Artifacts", "Bzip2_jll", "JLLWrappers", "Libdl", "Pkg", "Zlib_jll"] -git-tree-sha1 = "87eb71354d8ec1a96d4a7636bd57a7347dde3ef9" +deps = ["Artifacts", "Bzip2_jll", "JLLWrappers", "Libdl", "Zlib_jll"] +git-tree-sha1 = "d8db6a5a2fe1381c1ea4ef2cab7c69c2de7f9ea0" uuid = "d7e528f0-a631-5988-bf34-fe36492bcfd7" -version = "2.10.4+0" +version = "2.13.1+0" [[deps.FriBidi_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -605,21 +603,21 @@ version = "0.1.5" [[deps.GPUCompiler]] deps = ["ExprTools", "InteractiveUtils", "LLVM", "Libdl", "Logging", "Scratch", "TimerOutputs", "UUIDs"] -git-tree-sha1 = "cb090aea21c6ca78d59672a7e7d13bd56d09de64" +git-tree-sha1 = "72b2e3c2ba583d1a7aa35129e56cf92e07c083e3" uuid = "61eb1bfa-7361-4325-ad38-22787b887f55" -version = "0.20.3" +version = "0.21.4" [[deps.GR]] deps = ["Artifacts", "Base64", "DelimitedFiles", "Downloads", "GR_jll", "HTTP", "JSON", "Libdl", "LinearAlgebra", "Pkg", "Preferences", "Printf", "Random", "Serialization", "Sockets", "TOML", "Tar", "Test", "UUIDs", "p7zip_jll"] -git-tree-sha1 = "8b8a2fd4536ece6e554168c21860b6820a8a83db" +git-tree-sha1 = "d73afa4a2bb9de56077242d98cf763074ab9a970" uuid = "28b8d3ca-fb5f-59d9-8090-bfdbd6d07a71" -version = "0.72.7" +version = "0.72.9" [[deps.GR_jll]] -deps = ["Artifacts", "Bzip2_jll", "Cairo_jll", "FFMPEG_jll", "Fontconfig_jll", "GLFW_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pixman_jll", "Qt5Base_jll", "Zlib_jll", "libpng_jll"] -git-tree-sha1 = "19fad9cd9ae44847fe842558a744748084a722d1" +deps = ["Artifacts", "Bzip2_jll", "Cairo_jll", "FFMPEG_jll", "Fontconfig_jll", "GLFW_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pixman_jll", "Qt6Base_jll", "Zlib_jll", "libpng_jll"] +git-tree-sha1 = "f61f768bf090d97c532d24b64e07b237e9bb7b6b" uuid = "d2c73de3-f751-5644-a686-071e5b155ba9" -version = "0.72.7+0" +version = "0.72.9+0" [[deps.GaussQuadrature]] deps = ["SpecialFunctions"] @@ -681,9 +679,9 @@ version = "1.12.2+2" [[deps.HTTP]] deps = ["Base64", "CodecZlib", "ConcurrentUtilities", "Dates", "ExceptionUnwrapping", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] -git-tree-sha1 = "2613d054b0e18a3dea99ca1594e9a3960e025da4" +git-tree-sha1 = "cb56ccdd481c0dd7f975ad2b3b62d9eda088f7e2" uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3" -version = "1.9.7" +version = "1.9.14" [[deps.HarfBuzz_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "Graphite2_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg"] @@ -699,9 +697,9 @@ version = "0.1.15" [[deps.HypergeometricFunctions]] deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"] -git-tree-sha1 = "0ec02c648befc2f94156eaef13b0f38106212f3f" +git-tree-sha1 = "f218fe3736ddf977e0e772bc9a586b2383da2685" uuid = "34004b35-14d8-5ef3-9330-4cdb6864b03a" -version = "0.3.17" +version = "0.3.23" [[deps.IfElse]] git-tree-sha1 = "debdd00ffef04665ccbb3e150747a77560e8fad1" @@ -730,15 +728,15 @@ uuid = "b77e0a4c-d291-57a0-90e8-8db25a27a240" [[deps.IntervalSets]] deps = ["Dates", "Random", "Statistics"] -git-tree-sha1 = "16c0cc91853084cb5f58a78bd209513900206ce6" +git-tree-sha1 = "19ef25c6befb8076aefbc6f89d9011b415fb25da" uuid = "8197267c-284f-5f27-9208-e0e47529a953" -version = "0.7.4" +version = "0.7.5" [[deps.InverseFunctions]] deps = ["Test"] -git-tree-sha1 = "6667aadd1cdee2c6cd068128b3d226ebc4fb0c67" +git-tree-sha1 = "eabe3125edba5c9c10b60a160b1779a000dc8b29" uuid = "3587e190-3f89-42d0-90ee-14403ec27112" -version = "0.1.9" +version = "0.1.11" [[deps.IrrationalConstants]] git-tree-sha1 = "630b497eafcc20001bba38a4651b327dcfc491d2" @@ -758,9 +756,9 @@ version = "1.0.0" [[deps.JLD2]] deps = ["FileIO", "MacroTools", "Mmap", "OrderedCollections", "Pkg", "Printf", "Reexport", "Requires", "TranscodingStreams", "UUIDs"] -git-tree-sha1 = "42c17b18ced77ff0be65957a591d34f4ed57c631" +git-tree-sha1 = "aa6ffef1fd85657f4999030c52eaeec22a279738" uuid = "033835bb-8acc-5ee8-8aae-3f567f8a3819" -version = "0.4.31" +version = "0.4.33" [[deps.JLFzf]] deps = ["Pipe", "REPL", "Random", "fzf_jll"] @@ -792,17 +790,29 @@ git-tree-sha1 = "af433a10f3942e882d3c671aacb203e006a5808f" uuid = "9c1d0b0a-7046-5b2e-a33f-ea22f176ac7e" version = "0.2.1+0" +[[deps.KLU]] +deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse_jll"] +git-tree-sha1 = "764164ed65c30738750965d55652db9c94c59bfe" +uuid = "ef3ab10e-7fda-4108-b977-705223b18434" +version = "0.4.0" + [[deps.KernelAbstractions]] -deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"] -git-tree-sha1 = "b48617c5d764908b5fac493cd907cf33cc11eec1" +deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "Requires", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"] +git-tree-sha1 = "4c5875e4c228247e1c2b087669846941fb6e0118" uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c" -version = "0.9.6" +version = "0.9.8" [[deps.Krylov]] deps = ["LinearAlgebra", "Printf", "SparseArrays"] -git-tree-sha1 = "0356a64062656b0cbb43c504ad5de338251f4bda" +git-tree-sha1 = "6dc4ad9cd74ad4ca0a8e219e945dbd22039f2125" uuid = "ba0b0d4f-ebba-5204-a429-3ac8c609bfb7" -version = "0.9.1" +version = "0.9.2" + +[[deps.KrylovKit]] +deps = ["ChainRulesCore", "GPUArraysCore", "LinearAlgebra", "Printf"] +git-tree-sha1 = "1a5e1d9941c783b0119897d29f2eb665d876ecf3" +uuid = "0b1a1467-8014-51b9-945f-bf0ae24f4b77" +version = "0.6.0" [[deps.LAME_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -824,15 +834,15 @@ version = "3.0.0+1" [[deps.LLVM]] deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Printf", "Unicode"] -git-tree-sha1 = "5007c1421563108110bbd57f63d8ad4565808818" +git-tree-sha1 = "8695a49bfe05a2dc0feeefd06b4ca6361a018729" uuid = "929cbde3-209d-540e-8aea-75f648917ca0" -version = "5.2.0" +version = "6.1.0" [[deps.LLVMExtra_jll]] deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] -git-tree-sha1 = "1222116d7313cdefecf3d45a2bc1a89c4e7c9217" +git-tree-sha1 = "c35203c1e1002747da220ffc3c0762ce7754b08c" uuid = "dad2f222-ce93-54a1-a47d-0025e8a3acab" -version = "0.0.22+0" +version = "0.0.23+0" [[deps.LLVMOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -851,12 +861,6 @@ git-tree-sha1 = "f2355693d6778a178ade15952b7ac47a4ff97996" uuid = "b964fa9f-0449-5b57-a5c2-d3ea65f4040f" version = "1.3.0" -[[deps.LabelledArrays]] -deps = ["ArrayInterface", "ChainRulesCore", "LinearAlgebra", "MacroTools", "StaticArrays"] -git-tree-sha1 = "1cccf6d366e51fbaf80303158d49bb2171acfeee" -uuid = "2ee39098-c373-598a-b85f-a56591580800" -version = "1.9.0" - [[deps.Latexify]] deps = ["Formatting", "InteractiveUtils", "LaTeXStrings", "MacroTools", "Markdown", "OrderedCollections", "Printf", "Requires"] git-tree-sha1 = "f428ae552340899a935973270b8d98e5a31c49fe" @@ -864,10 +868,16 @@ uuid = "23fbe1c1-3f47-55db-b15f-69d7ec21a316" version = "0.16.1" [[deps.LayoutPointers]] -deps = ["ArrayInterface", "LinearAlgebra", "ManualMemory", "SIMDTypes", "Static"] -git-tree-sha1 = "9e72f9e890c46081dbc0ebeaf6ccaffe16e51626" +deps = ["ArrayInterface", "LinearAlgebra", "ManualMemory", "SIMDTypes", "Static", "StaticArrayInterface"] +git-tree-sha1 = "88b8f66b604da079a627b6fb2860d3704a6729a1" uuid = "10f19ff3-798f-405d-979b-55457f8fc047" -version = "0.1.8" +version = "0.1.14" + +[[deps.Lazy]] +deps = ["MacroTools"] +git-tree-sha1 = "1370f8202dac30758f3c345f9909b97f53d87d3f" +uuid = "50d2b5c4-7a5e-59d5-8109-a42b560f39c0" +version = "0.15.1" [[deps.LazyArrays]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "MacroTools", "MatrixFactorizations", "SparseArrays", "StaticArrays"] @@ -950,10 +960,10 @@ uuid = "4b2f31a3-9ecc-558c-b454-b3730dcb73e9" version = "2.35.0+0" [[deps.Libtiff_jll]] -deps = ["Artifacts", "JLLWrappers", "JpegTurbo_jll", "LERC_jll", "Libdl", "Pkg", "Zlib_jll", "Zstd_jll"] -git-tree-sha1 = "3eb79b0ca5764d4799c06699573fd8f533259713" +deps = ["Artifacts", "JLLWrappers", "JpegTurbo_jll", "LERC_jll", "Libdl", "XZ_jll", "Zlib_jll", "Zstd_jll"] +git-tree-sha1 = "2da088d113af58221c52828a80378e16be7d037a" uuid = "89763e89-9b03-5906-acba-b20f662cd828" -version = "4.4.0+0" +version = "4.5.1+1" [[deps.Libuuid_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -983,6 +993,12 @@ git-tree-sha1 = "a58ab1d18efa0bcf9f0868c6d387e4126dad3e72" uuid = "5c8ed15e-5a4c-59e4-a42b-c7e8811fb125" version = "2.5.2" +[[deps.LinearSolve]] +deps = ["ArrayInterface", "DocStringExtensions", "EnumX", "FastLapackInterface", "GPUArraysCore", "IterativeSolvers", "KLU", "Krylov", "KrylovKit", "LinearAlgebra", "Preferences", "RecursiveFactorization", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SnoopPrecompile", "SparseArrays", "Sparspak", "SuiteSparse", "UnPack"] +git-tree-sha1 = "4a4f8cc7a59fadbb02d1852d1e0cef5dca3a9460" +uuid = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae" +version = "1.42.0" + [[deps.LogExpFunctions]] deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"] git-tree-sha1 = "c3ce8e7420b3a6e071e0fe4745f5d4300e37b13f" @@ -999,10 +1015,10 @@ uuid = "e6f89c97-d47a-5376-807f-9c37f3926c36" version = "1.0.0" [[deps.LoopVectorization]] -deps = ["ArrayInterface", "CPUSummary", "ChainRulesCore", "CloseOpenIntervals", "DocStringExtensions", "ForwardDiff", "HostCPUFeatures", "IfElse", "LayoutPointers", "LinearAlgebra", "OffsetArrays", "PolyesterWeave", "SIMDDualNumbers", "SLEEFPirates", "SpecialFunctions", "Static", "ThreadingUtilities", "UnPack", "VectorizationBase"] -git-tree-sha1 = "4392c19f0203df81512b6790a0a67446650bdce0" +deps = ["ArrayInterface", "ArrayInterfaceCore", "CPUSummary", "ChainRulesCore", "CloseOpenIntervals", "DocStringExtensions", "ForwardDiff", "HostCPUFeatures", "IfElse", "LayoutPointers", "LinearAlgebra", "OffsetArrays", "PolyesterWeave", "PrecompileTools", "SIMDTypes", "SLEEFPirates", "SpecialFunctions", "Static", "StaticArrayInterface", "ThreadingUtilities", "UnPack", "VectorizationBase"] +git-tree-sha1 = "c88a4afe1703d731b1c4fdf4e3c7e77e3b176ea2" uuid = "bdcacae8-1622-11e9-2a5c-532679323890" -version = "0.12.110" +version = "0.12.165" [[deps.MKL_jll]] deps = ["Artifacts", "IntelOpenMP_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "Pkg"] @@ -1024,9 +1040,9 @@ version = "4.1.2+0" [[deps.MPIPreferences]] deps = ["Libdl", "Preferences"] -git-tree-sha1 = "d86a788b336e8ae96429c0c42740ccd60ac0dfcc" +git-tree-sha1 = "781916a2ebf2841467cda03b6f1af43e23839d85" uuid = "3da0fdf6-3ccc-4f1b-acd9-58baa6c99267" -version = "0.1.8" +version = "0.1.9" [[deps.MPItrampoline_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML"] @@ -1154,16 +1170,16 @@ uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908" version = "1.2.0" [[deps.NonlinearSolve]] -deps = ["ArrayInterfaceCore", "FiniteDiff", "ForwardDiff", "IterativeSolvers", "LinearAlgebra", "RecursiveArrayTools", "RecursiveFactorization", "Reexport", "SciMLBase", "Setfield", "StaticArrays", "UnPack"] -git-tree-sha1 = "a754a21521c0ab48d37f44bbac1eefd1387bdcfc" +deps = ["ArrayInterface", "DiffEqBase", "EnumX", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "LinearSolve", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SnoopPrecompile", "SparseArrays", "SparseDiffTools", "StaticArraysCore", "UnPack"] +git-tree-sha1 = "a6000c813371cd3cd9cbbdf8a356fc3a97138d92" uuid = "8913a72c-1f9b-4ce2-8d82-65094dcecaec" -version = "0.3.22" +version = "1.6.0" [[deps.OffsetArrays]] deps = ["Adapt"] -git-tree-sha1 = "82d7c9e310fe55aa54996e6f7f94674e2a38fcb4" +git-tree-sha1 = "2ac17d29c523ce1cd38e27785a7d23024853a4bb" uuid = "6fe1bfb0-de20-5000-8ca7-80f57d26f881" -version = "1.12.9" +version = "1.12.10" [[deps.Ogg_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1218,15 +1234,15 @@ uuid = "91d4177d-7536-5919-b921-800302f37372" version = "1.3.2+0" [[deps.OrderedCollections]] -git-tree-sha1 = "d321bf2de576bf25ec4d3e4360faca399afca282" +git-tree-sha1 = "2e73fe17cac3c62ad1aebe70d44c963c3cfdc3e3" uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" -version = "1.6.0" +version = "1.6.2" [[deps.OrdinaryDiffEq]] -deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastClosures", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "Polyester", "PreallocationTools", "RecursiveArrayTools", "Reexport", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"] -git-tree-sha1 = "e7c3b814328cce3d22dd635ca547e70a6990993a" +deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "IfElse", "LineSearches", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLNLSolve", "SimpleNonlinearSolve", "SimpleUnPack", "SparseArrays", "SparseDiffTools", "StaticArrayInterface", "StaticArrays", "TruncatedStacktraces"] +git-tree-sha1 = "6ffebfa8971546bace3fc312f9a703795f79f5b9" uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed" -version = "5.71.2" +version = "6.51.2" [[deps.PCRE2_jll]] deps = ["Artifacts", "Libdl"] @@ -1239,6 +1255,12 @@ git-tree-sha1 = "67eae2738d63117a196f497d7db789821bce61d1" uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" version = "0.11.17" +[[deps.PackageExtensionCompat]] +deps = ["Requires", "TOML"] +git-tree-sha1 = "32f3d52212a8d1c5d589a58851b1f04c97339110" +uuid = "65ce6f38-6b18-4e1d-a461-8949797d7930" +version = "1.0.0" + [[deps.Parameters]] deps = ["OrderedCollections", "UnPack"] git-tree-sha1 = "34c0e9ad262e5f7fc75b10a9952ca7692cfc5fbe" @@ -1287,27 +1309,27 @@ version = "1.3.5" [[deps.Plots]] deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "UnitfulLatexify", "Unzip"] -git-tree-sha1 = "75ca67b2c6512ad2d0c767a7cfc55e75075f8bbc" +git-tree-sha1 = "9f8675a55b37a70aa23177ec110f6e3f4dd68466" uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" -version = "1.38.16" +version = "1.38.17" [[deps.Polyester]] -deps = ["ArrayInterface", "BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "ManualMemory", "PolyesterWeave", "Requires", "Static", "StrideArraysCore", "ThreadingUtilities"] -git-tree-sha1 = "bfd5fb3376bc084d202c717bbba8c94696755d87" +deps = ["ArrayInterface", "BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "ManualMemory", "PolyesterWeave", "Requires", "Static", "StaticArrayInterface", "StrideArraysCore", "ThreadingUtilities"] +git-tree-sha1 = "3d811babe092a6e7b130beee84998fe7663348b6" uuid = "f517fe37-dbe3-4b94-8317-1923a5111588" -version = "0.6.12" +version = "0.7.5" [[deps.PolyesterWeave]] deps = ["BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "Static", "ThreadingUtilities"] -git-tree-sha1 = "43883d15c7cf16f340b9367c645cf88372f55641" +git-tree-sha1 = "240d7170f5ffdb285f9427b92333c3463bf65bf6" uuid = "1d0040c9-8b98-4ee7-8388-3f51789ca0ad" -version = "0.1.13" +version = "0.2.1" [[deps.PreallocationTools]] -deps = ["Adapt", "ArrayInterface", "ForwardDiff", "LabelledArrays"] -git-tree-sha1 = "6c138c8510111fa47b5d2ed8ada482d97e279bee" +deps = ["Adapt", "ArrayInterface", "ForwardDiff", "Requires"] +git-tree-sha1 = "f739b1b3cc7b9949af3b35089931f2b58c289163" uuid = "d236fae5-4411-538c-8e31-a6e3d9e00b46" -version = "0.2.4" +version = "0.4.12" [[deps.PrecompileTools]] deps = ["Preferences"] @@ -1337,11 +1359,11 @@ git-tree-sha1 = "80d919dee55b9c50e8d9e2da5eeafff3fe58b539" uuid = "33c8b6b6-d38a-422a-b730-caa89a2f386c" version = "0.1.4" -[[deps.Qt5Base_jll]] -deps = ["Artifacts", "CompilerSupportLibraries_jll", "Fontconfig_jll", "Glib_jll", "JLLWrappers", "Libdl", "Libglvnd_jll", "OpenSSL_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libxcb_jll", "Xorg_xcb_util_image_jll", "Xorg_xcb_util_keysyms_jll", "Xorg_xcb_util_renderutil_jll", "Xorg_xcb_util_wm_jll", "Zlib_jll", "xkbcommon_jll"] -git-tree-sha1 = "0c03844e2231e12fda4d0086fd7cbe4098ee8dc5" -uuid = "ea2cea3b-5b76-57ae-a6ef-0a8af62496e1" -version = "5.15.3+2" +[[deps.Qt6Base_jll]] +deps = ["Artifacts", "CompilerSupportLibraries_jll", "Fontconfig_jll", "Glib_jll", "JLLWrappers", "Libdl", "Libglvnd_jll", "OpenSSL_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Xorg_libxcb_jll", "Xorg_xcb_util_image_jll", "Xorg_xcb_util_keysyms_jll", "Xorg_xcb_util_renderutil_jll", "Xorg_xcb_util_wm_jll", "Zlib_jll", "xkbcommon_jll"] +git-tree-sha1 = "364898e8f13f7eaaceec55fd3d08680498c0aa6e" +uuid = "c0090381-4147-56d7-9ebc-da0b1113ec56" +version = "6.4.2+3" [[deps.QuadGK]] deps = ["DataStructures", "LinearAlgebra"] @@ -1382,10 +1404,10 @@ uuid = "01d81517-befc-4cb6-b9ec-a95719d0359c" version = "0.6.12" [[deps.RecursiveArrayTools]] -deps = ["Adapt", "ArrayInterfaceCore", "ArrayInterfaceStaticArraysCore", "ChainRulesCore", "DocStringExtensions", "FillArrays", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "StaticArraysCore", "Statistics", "Tables", "ZygoteRules"] -git-tree-sha1 = "a5ce741acddc02f0d4fc6505463ca89697d7fb23" +deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "Requires", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] +git-tree-sha1 = "7ed35fb5f831aaf09c2d7c8736d44667a1afdcb0" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "2.32.3" +version = "2.38.7" [[deps.RecursiveFactorization]] deps = ["LinearAlgebra", "LoopVectorization", "Polyester", "SnoopPrecompile", "StrideArraysCore", "TriangularSolve"] @@ -1444,12 +1466,6 @@ version = "0.5.11" uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" version = "0.7.0" -[[deps.SIMDDualNumbers]] -deps = ["ForwardDiff", "IfElse", "SLEEFPirates", "VectorizationBase"] -git-tree-sha1 = "dd4195d308df24f33fb10dde7c22103ba88887fa" -uuid = "3cdde19b-5bb0-4aaf-8931-af3e248e098b" -version = "0.1.1" - [[deps.SIMDTypes]] git-tree-sha1 = "330289636fb8107c5f32088d2741e9fd7a061a5c" uuid = "94e857df-77ce-4151-89e5-788b33177be4" @@ -1462,10 +1478,22 @@ uuid = "476501e8-09a2-5ece-8869-fb82de89a1fa" version = "0.6.39" [[deps.SciMLBase]] -deps = ["ArrayInterfaceCore", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "RecipesBase", "RecursiveArrayTools", "StaticArraysCore", "Statistics", "Tables"] -git-tree-sha1 = "f1bc477b771a75178da44adb252fdc70b4b22e24" +deps = ["ADTypes", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] +git-tree-sha1 = "04370090604cd399db5bebddb636d80ab9d338e9" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "1.50.1" +version = "1.94.0" + +[[deps.SciMLNLSolve]] +deps = ["DiffEqBase", "LineSearches", "NLsolve", "Reexport", "SciMLBase"] +git-tree-sha1 = "9dfc8e9e3d58c0c74f1a821c762b5349da13eccf" +uuid = "e9a6253c-8580-4d32-9898-8661bb511710" +version = "0.1.8" + +[[deps.SciMLOperators]] +deps = ["ArrayInterface", "DocStringExtensions", "Lazy", "LinearAlgebra", "Setfield", "SparseArrays", "StaticArraysCore", "Tricks"] +git-tree-sha1 = "6a657a73322170eec86fb427661dbee079b85bff" +uuid = "c0aeaf25-5076-4817-a8d5-81caf7dfa961" +version = "0.2.12" [[deps.Scratch]] deps = ["Dates"] @@ -1477,10 +1505,10 @@ version = "1.2.0" uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b" [[deps.Setfield]] -deps = ["ConstructionBase", "Future", "MacroTools", "Requires"] -git-tree-sha1 = "38d88503f695eb0301479bc9b0d4320b378bafe5" +deps = ["ConstructionBase", "Future", "MacroTools", "StaticArraysCore"] +git-tree-sha1 = "e2cc6d8c88613c05e1defb55170bf5ff211fbeac" uuid = "efcf1570-3423-57d1-acb7-fd33fddbac46" -version = "0.8.2" +version = "1.1.1" [[deps.SharedArrays]] deps = ["Distributed", "Mmap", "Random", "Serialization"] @@ -1497,12 +1525,23 @@ git-tree-sha1 = "874e8867b33a00e784c8a7e4b60afe9e037b74e1" uuid = "777ac1f9-54b0-4bf8-805c-2214025038e7" version = "1.1.0" +[[deps.SimpleNonlinearSolve]] +deps = ["ArrayInterface", "DiffEqBase", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "PackageExtensionCompat", "PrecompileTools", "Reexport", "SciMLBase", "StaticArraysCore"] +git-tree-sha1 = "91fcc402c4ab978ad5759489db9a9c5a71732f2d" +uuid = "727e6d20-b764-4bd8-a329-72de5adea6c7" +version = "0.1.18" + [[deps.SimpleTraits]] deps = ["InteractiveUtils", "MacroTools"] git-tree-sha1 = "5d7e3f4e11935503d3ecaf7186eac40602e7d231" uuid = "699a6c99-e7fa-54fc-8d76-47d257e15c1d" version = "0.9.4" +[[deps.SimpleUnPack]] +git-tree-sha1 = "58e6353e72cde29b90a69527e56df1b5c3d8c437" +uuid = "ce78b400-467f-4804-87d8-8f486da07d0a" +version = "1.1.0" + [[deps.SnoopPrecompile]] deps = ["Preferences"] git-tree-sha1 = "e760a70afdcd461cf01a575947738d359234665c" @@ -1524,9 +1563,15 @@ uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" [[deps.SparseDiffTools]] deps = ["Adapt", "ArrayInterface", "Compat", "DataStructures", "FiniteDiff", "ForwardDiff", "Graphs", "LinearAlgebra", "Requires", "SparseArrays", "StaticArrays", "VertexSafeGraphs"] -git-tree-sha1 = "314a07e191ea4a5ea5a2f9d6b39f03833bde5e08" +git-tree-sha1 = "e19ac47477c9a8fcca06dab5e5471417d5d9d723" uuid = "47a9eef4-7e08-11e9-0b38-333d64bd3804" -version = "1.21.0" +version = "1.31.0" + +[[deps.Sparspak]] +deps = ["Libdl", "LinearAlgebra", "Logging", "OffsetArrays", "Printf", "SparseArrays", "Test"] +git-tree-sha1 = "342cf4b449c299d8d1ceaf00b7a49f4fbc7940e7" +uuid = "e56a9233-b9d6-4f03-8d0f-1825330902ac" +version = "0.3.9" [[deps.SpecialFunctions]] deps = ["ChainRulesCore", "IrrationalConstants", "LogExpFunctions", "OpenLibm_jll", "OpenSpecFun_jll"] @@ -1542,20 +1587,26 @@ version = "0.1.15" [[deps.Static]] deps = ["IfElse"] -git-tree-sha1 = "7f5a513baec6f122401abfc8e9c074fdac54f6c1" +git-tree-sha1 = "f295e0a1da4ca425659c57441bcb59abb035a4bc" uuid = "aedffcd0-7271-4cad-89d0-dc628f76c6d3" -version = "0.4.1" +version = "0.8.8" + +[[deps.StaticArrayInterface]] +deps = ["ArrayInterface", "Compat", "IfElse", "LinearAlgebra", "Requires", "SnoopPrecompile", "SparseArrays", "Static", "SuiteSparse"] +git-tree-sha1 = "33040351d2403b84afce74dae2e22d3f5b18edcb" +uuid = "0d7ed370-da01-4f52-bd93-41d350b8b718" +version = "1.4.0" [[deps.StaticArrays]] deps = ["LinearAlgebra", "Random", "StaticArraysCore", "Statistics"] -git-tree-sha1 = "832afbae2a45b4ae7e831f86965469a24d1d8a83" +git-tree-sha1 = "9cabadf6e7cd2349b6cf49f1915ad2028d65e881" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.5.26" +version = "1.6.2" [[deps.StaticArraysCore]] -git-tree-sha1 = "6b7ba252635a5eff6a0b0664a41ee140a1c9e72a" +git-tree-sha1 = "36b3d696ce6366023a0ea192b4cd442268995a0d" uuid = "1e83bf80-4336-4d27-bf5d-d5a4f845583c" -version = "1.4.0" +version = "1.4.2" [[deps.Statistics]] deps = ["LinearAlgebra", "SparseArrays"] @@ -1580,15 +1631,26 @@ uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c" version = "1.3.0" [[deps.StrideArraysCore]] -deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "ManualMemory", "SIMDTypes", "Static", "ThreadingUtilities"] -git-tree-sha1 = "0b1ea3e3fdf93b42e9c0f58347168618b6acc259" +deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "ManualMemory", "SIMDTypes", "Static", "StaticArrayInterface", "ThreadingUtilities"] +git-tree-sha1 = "f02eb61eb5c97b48c153861c72fbbfdddc607e06" uuid = "7792a7ef-975c-4747-a70f-980b88e8d1da" -version = "0.3.17" +version = "0.4.17" [[deps.SuiteSparse]] deps = ["Libdl", "LinearAlgebra", "Serialization", "SparseArrays"] uuid = "4607b0f0-06f3-5cda-b6b1-a6196a1729e9" +[[deps.SuiteSparse_jll]] +deps = ["Artifacts", "Libdl", "Pkg", "libblastrampoline_jll"] +uuid = "bea87d4a-7f5b-5778-9afe-8cc45184846c" +version = "5.10.1+0" + +[[deps.SymbolicIndexingInterface]] +deps = ["DocStringExtensions"] +git-tree-sha1 = "f8ab052bfcbdb9b48fad2c80c873aa0d0344dfe5" +uuid = "2efcf032-c050-4f8e-a9bb-153293bab1f5" +version = "0.2.2" + [[deps.TOML]] deps = ["Dates"] uuid = "fa267f1f-6049-4f14-aa54-33bafae1ed76" @@ -1641,9 +1703,9 @@ uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40" [[deps.ThreadingUtilities]] deps = ["ManualMemory"] -git-tree-sha1 = "c97f60dd4f2331e1a495527f80d242501d2f9865" +git-tree-sha1 = "eda08f7e9818eb53661b3deb74e3159460dfbc27" uuid = "8290d209-cae3-49c0-8002-c8c24d57dab5" -version = "0.5.1" +version = "0.5.2" [[deps.ThreadsX]] deps = ["ArgCheck", "BangBang", "ConstructionBase", "InitialValues", "MicroCollections", "Referenceables", "Setfield", "SplittablesBase", "Transducers"] @@ -1664,10 +1726,10 @@ uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa" version = "0.9.13" [[deps.Transducers]] -deps = ["Adapt", "ArgCheck", "BangBang", "Baselet", "CompositionsBase", "DefineSingletons", "Distributed", "InitialValues", "Logging", "Markdown", "MicroCollections", "Requires", "Setfield", "SplittablesBase", "Tables"] -git-tree-sha1 = "25358a5f2384c490e98abd565ed321ffae2cbb37" +deps = ["Adapt", "ArgCheck", "BangBang", "Baselet", "CompositionsBase", "ConstructionBase", "DefineSingletons", "Distributed", "InitialValues", "Logging", "Markdown", "MicroCollections", "Requires", "Setfield", "SplittablesBase", "Tables"] +git-tree-sha1 = "53bd5978b182fa7c57577bdb452c35e5b4fb73a5" uuid = "28d57a85-8fef-5791-bfe6-a80928e7c999" -version = "0.4.76" +version = "0.4.78" [[deps.TriangularSolve]] deps = ["CloseOpenIntervals", "IfElse", "LayoutPointers", "LinearAlgebra", "LoopVectorization", "Polyester", "Static", "VectorizationBase"] @@ -1675,11 +1737,22 @@ git-tree-sha1 = "31eedbc0b6d07c08a700e26d31298ac27ef330eb" uuid = "d5829a12-d9aa-46ab-831f-fb7c9ab06edf" version = "0.1.19" +[[deps.Tricks]] +git-tree-sha1 = "aadb748be58b492045b4f56166b5188aa63ce549" +uuid = "410a4b4d-49e4-4fbc-ab6d-cb71b17b3775" +version = "0.1.7" + [[deps.TriplotBase]] git-tree-sha1 = "4d4ed7f294cda19382ff7de4c137d24d16adc89b" uuid = "981d1d27-644d-49a2-9326-4793e63143c3" version = "0.1.0" +[[deps.TruncatedStacktraces]] +deps = ["InteractiveUtils", "MacroTools", "Preferences"] +git-tree-sha1 = "ea3e54c2bdde39062abf5a9758a23735558705e1" +uuid = "781d530d-4396-4725-bb49-402e4bee1e77" +version = "1.4.0" + [[deps.URIs]] git-tree-sha1 = "074f993b0ca030848b897beff716d93aca60f06a" uuid = "5c2747f8-b7ea-4ff2-ba2e-563bfd36b1d4" @@ -1704,10 +1777,10 @@ uuid = "1cfade01-22cf-5700-b092-accc4b62d6e1" version = "0.4.1" [[deps.Unitful]] -deps = ["ConstructionBase", "Dates", "LinearAlgebra", "Random"] -git-tree-sha1 = "ba4aa36b2d5c98d6ed1f149da916b3ba46527b2b" +deps = ["ConstructionBase", "Dates", "InverseFunctions", "LinearAlgebra", "Random"] +git-tree-sha1 = "c4d2a349259c8eba66a00a540d550f122a3ab228" uuid = "1986cc42-f94f-5a68-af5c-568840ba703d" -version = "1.14.0" +version = "1.15.0" [[deps.UnitfulLatexify]] deps = ["LaTeXStrings", "Latexify", "Unitful"] @@ -1722,9 +1795,9 @@ version = "0.2.1" [[deps.UnsafeAtomicsLLVM]] deps = ["LLVM", "UnsafeAtomics"] -git-tree-sha1 = "ea37e6066bf194ab78f4e747f5245261f17a7175" +git-tree-sha1 = "323e3d0acf5e78a56dfae7bd8928c989b4f3083e" uuid = "d80eeb9a-aca5-4d75-85e5-170c8b632249" -version = "0.1.2" +version = "0.1.3" [[deps.Unzip]] git-tree-sha1 = "ca0969166a028236229f63514992fc073799bb78" @@ -1737,10 +1810,10 @@ uuid = "4004b06d-e244-455f-a6ce-a5f9919cc534" version = "1.0.1" [[deps.VectorizationBase]] -deps = ["ArrayInterface", "CPUSummary", "HostCPUFeatures", "IfElse", "LayoutPointers", "Libdl", "LinearAlgebra", "SIMDTypes", "Static"] -git-tree-sha1 = "c95d242ade2d67c1510ce52d107cfca7a83e0b4e" +deps = ["ArrayInterface", "CPUSummary", "HostCPUFeatures", "IfElse", "LayoutPointers", "Libdl", "LinearAlgebra", "SIMDTypes", "Static", "StaticArrayInterface"] +git-tree-sha1 = "b182207d4af54ac64cbc71797765068fdeff475d" uuid = "3d5dd08c-fd9d-11e8-17fa-ed2836048c2f" -version = "0.21.33" +version = "0.21.64" [[deps.VertexSafeGraphs]] deps = ["Graphs"] @@ -1778,17 +1851,23 @@ git-tree-sha1 = "91844873c4085240b95e795f692c4cec4d805f8a" uuid = "aed1982a-8fda-507f-9586-7b0439959a61" version = "1.1.34+0" +[[deps.XZ_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "2222b751598bd9f4885c9ce9cd23e83404baa8ce" +uuid = "ffd25f8a-64ca-5728-b0f7-c24cf3aae800" +version = "5.4.3+1" + [[deps.Xorg_libX11_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libxcb_jll", "Xorg_xtrans_jll"] -git-tree-sha1 = "5be649d550f3f4b95308bf0183b82e2582876527" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libxcb_jll", "Xorg_xtrans_jll"] +git-tree-sha1 = "afead5aba5aa507ad5a3bf01f58f82c8d1403495" uuid = "4f6342f7-b3d2-589e-9d20-edeb45f2b2bc" -version = "1.6.9+4" +version = "1.8.6+0" [[deps.Xorg_libXau_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "4e490d5c960c314f33885790ed410ff3a94ce67e" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "6035850dcc70518ca32f012e46015b9beeda49d8" uuid = "0c0b7dd1-d40b-584c-a123-a41640f87eec" -version = "1.0.9+4" +version = "1.0.11+0" [[deps.Xorg_libXcursor_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libXfixes_jll", "Xorg_libXrender_jll"] @@ -1797,10 +1876,10 @@ uuid = "935fb764-8cf2-53bf-bb30-45bb1f8bf724" version = "1.2.0+4" [[deps.Xorg_libXdmcp_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "4fe47bd2247248125c428978740e18a681372dd4" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "34d526d318358a859d7de23da945578e8e8727b7" uuid = "a3789734-cfe1-5b06-b2d0-1dd0d9d62d05" -version = "1.1.3+4" +version = "1.1.4+0" [[deps.Xorg_libXext_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libX11_jll"] @@ -1839,22 +1918,22 @@ uuid = "ea2f1a96-1ddc-540d-b46f-429655e07cfa" version = "0.9.10+4" [[deps.Xorg_libpthread_stubs_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "6783737e45d3c59a4a4c4091f5f88cdcf0908cbb" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "8fdda4c692503d44d04a0603d9ac0982054635f9" uuid = "14d82f49-176c-5ed1-bb49-ad3f5cbd8c74" -version = "0.1.0+3" +version = "0.1.1+0" [[deps.Xorg_libxcb_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "XSLT_jll", "Xorg_libXau_jll", "Xorg_libXdmcp_jll", "Xorg_libpthread_stubs_jll"] -git-tree-sha1 = "daf17f441228e7a3833846cd048892861cff16d6" +deps = ["Artifacts", "JLLWrappers", "Libdl", "XSLT_jll", "Xorg_libXau_jll", "Xorg_libXdmcp_jll", "Xorg_libpthread_stubs_jll"] +git-tree-sha1 = "b4bfde5d5b652e22b9c790ad00af08b6d042b97d" uuid = "c7cfdc94-dc32-55de-ac96-5a1b8d977c5b" -version = "1.13.0+3" +version = "1.15.0+0" [[deps.Xorg_libxkbfile_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libX11_jll"] -git-tree-sha1 = "926af861744212db0eb001d9e40b5d16292080b2" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libX11_jll"] +git-tree-sha1 = "730eeca102434283c50ccf7d1ecdadf521a765a4" uuid = "cc61e674-0454-545c-8b26-ed2c68acab7a" -version = "1.1.0+4" +version = "1.1.2+0" [[deps.Xorg_xcb_util_image_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_xcb_util_jll"] @@ -1887,22 +1966,22 @@ uuid = "c22f9ab0-d5fe-5066-847c-f4bb1cd4e361" version = "0.4.1+1" [[deps.Xorg_xkbcomp_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libxkbfile_jll"] -git-tree-sha1 = "4bcbf660f6c2e714f87e960a171b119d06ee163b" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libxkbfile_jll"] +git-tree-sha1 = "330f955bc41bb8f5270a369c473fc4a5a4e4d3cb" uuid = "35661453-b289-5fab-8a00-3d9160c6a3a4" -version = "1.4.2+4" +version = "1.4.6+0" [[deps.Xorg_xkeyboard_config_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_xkbcomp_jll"] -git-tree-sha1 = "5c8424f8a67c3f2209646d4425f3d415fee5931d" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_xkbcomp_jll"] +git-tree-sha1 = "691634e5453ad362044e2ad653e79f3ee3bb98c3" uuid = "33bec58e-1273-512f-9401-5d533626f822" -version = "2.27.0+4" +version = "2.39.0+0" [[deps.Xorg_xtrans_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "79c31e7844f6ecf779705fbc12146eb190b7d845" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "e92a1a012a10506618f10b7047e478403a046c77" uuid = "c5fb5394-a638-5e4d-96e5-b29de1b5cf10" -version = "1.4.0+3" +version = "1.5.0+0" [[deps.Zlib_jll]] deps = ["Libdl"] diff --git a/examples/Project.toml b/examples/Project.toml index b7062edc3e..20d9cdfcb4 100644 --- a/examples/Project.toml +++ b/examples/Project.toml @@ -32,10 +32,5 @@ Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40" ThreadsX = "ac1d9e8a-700a-412c-b207-f0111f4b6c0d" UnPack = "3a884ed6-31ef-47d7-9d2a-63182c4928ed" -[compat] -OrdinaryDiffEq = "5.64.0" -Plots = "1.30.1" -SciMLBase = "<1.51" - [extras] CPUSummary = "2a0fbf3d-bb9c-48f3-b0a9-814d99fd7ab9" diff --git a/examples/column/hydrostatic_implicit.jl b/examples/column/hydrostatic_implicit.jl index de97568ff9..e052fef671 100644 --- a/examples/column/hydrostatic_implicit.jl +++ b/examples/column/hydrostatic_implicit.jl @@ -1,4 +1,5 @@ using LinearAlgebra +import ClimaTimeSteppers as CTS import ClimaCore: Fields, Domains, @@ -233,11 +234,12 @@ ndays = 1.0 # Solve the ODE operator prob = ODEProblem( - ODEFunction( - tendency!, - jac = jacobian!, - jac_prototype = zeros(length(Y), length(Y)), - tgrad = (dT, Y, p, t) -> fill!(dT, 0), + CTS.ClimaODEFunction(; + T_imp! = ODEFunction( + tendency!, + jac = jacobian!, + jac_prototype = zeros(length(Y), length(Y)), + ), ), Y, (0.0, 60 * 60 * 24 * ndays), @@ -246,7 +248,7 @@ prob = ODEProblem( sol = solve( prob, # ImplicitEuler(), - Rosenbrock23(linsolve = linsolve!), + CTS.IMEXAlgorithm(CTS.ARS343(), CTS.NewtonsMethod()), dt = Δt, saveat = 60 * 60, # save every hour progress = true, diff --git a/examples/hybrid/driver.jl b/examples/hybrid/driver.jl index c17149938e..6da22f75b4 100644 --- a/examples/hybrid/driver.jl +++ b/examples/hybrid/driver.jl @@ -24,6 +24,7 @@ postprocessing(sol, output_dir) = nothing ################################################################################ +import ClimaTimeSteppers as CTS using ClimaComms const comms_ctx = ClimaComms.context() is_distributed = comms_ctx isa ClimaComms.MPICommsContext @@ -145,13 +146,14 @@ end callback = CallbackSet(dss_callback, save_to_disk_callback, additional_callbacks...) -problem = SplitODEProblem( - ODEFunction( - implicit_tendency!; - jac_kwargs(ode_algo, Y, jacobian_flags)..., - tgrad = (∂Y∂t, Y, p, t) -> (∂Y∂t .= FT(0)), +problem = ODE.ODEProblem( + CTS.ClimaODEFunction(; + T_imp! = ODEFunction( + implicit_tendency!; + jac_kwargs(ode_algo, Y, jacobian_flags)..., + ), + T_exp! = remaining_tendency!, ), - remaining_tendency!, Y, (t_start, t_end), p, diff --git a/examples/hybrid/plane/inertial_gravity_wave.jl b/examples/hybrid/plane/inertial_gravity_wave.jl index 90d4a2f70f..4cfaee5002 100644 --- a/examples/hybrid/plane/inertial_gravity_wave.jl +++ b/examples/hybrid/plane/inertial_gravity_wave.jl @@ -63,7 +63,7 @@ horizontal_mesh = periodic_line_mesh(; x_max, x_elem = x_elem) dt = is_small_scale ? FT(1.5) : FT(20) t_end = is_small_scale ? FT(60 * 60 * 0.5) : FT(60 * 60 * 8) dt_save_to_sol = t_end / (animation_duration * fps) -ode_algorithm = OrdinaryDiffEq.Rosenbrock23 +ode_algorithm = CTS.ARS343 jacobian_flags = (; ∂ᶜ𝔼ₜ∂ᶠ𝕄_mode = ᶜ𝔼_name == :ρe ? :no_∂ᶜp∂ᶜK : :exact, ∂ᶠ𝕄ₜ∂ᶜρ_mode = :exact, diff --git a/examples/hybrid/sphere/balanced_flow_rhoe.jl b/examples/hybrid/sphere/balanced_flow_rhoe.jl index f0b8fc4768..aa5ffa2e74 100644 --- a/examples/hybrid/sphere/balanced_flow_rhoe.jl +++ b/examples/hybrid/sphere/balanced_flow_rhoe.jl @@ -1,4 +1,5 @@ using Test +import ClimaTimeSteppers as CTS using ClimaCorePlots, Plots using ClimaCore.DataLayouts @@ -15,7 +16,8 @@ t_end = FT(60 * 60) dt = FT(5) dt_save_to_sol = FT(50) dt_save_to_disk = FT(0) # 0 means don't save to disk -ode_algorithm = OrdinaryDiffEq.SSPRK33 +ode_algorithm = CTS.SSP33ShuOsher +jacobian_flags = (; ∂ᶜ𝔼ₜ∂ᶠ𝕄_mode = :exact, ∂ᶠ𝕄ₜ∂ᶜρ_mode = :exact) additional_cache(ᶜlocal_geometry, ᶠlocal_geometry, dt) = merge( hyperdiffusion_cache(ᶜlocal_geometry, ᶠlocal_geometry; κ₄ = FT(2e17)), diff --git a/examples/hybrid/sphere/balanced_flow_rhotheta.jl b/examples/hybrid/sphere/balanced_flow_rhotheta.jl index 94f6049729..f59fe6f4c0 100644 --- a/examples/hybrid/sphere/balanced_flow_rhotheta.jl +++ b/examples/hybrid/sphere/balanced_flow_rhotheta.jl @@ -14,7 +14,7 @@ t_end = FT(60 * 60 * 24 * 10) dt = FT(400) dt_save_to_sol = FT(60 * 60 * 24) dt_save_to_disk = FT(0) # 0 means don't save to disk -ode_algorithm = OrdinaryDiffEq.Rosenbrock23 +ode_algorithm = CTS.ARS343 jacobian_flags = (; ∂ᶜ𝔼ₜ∂ᶠ𝕄_mode = :exact, ∂ᶠ𝕄ₜ∂ᶜρ_mode = :exact) additional_cache(ᶜlocal_geometry, ᶠlocal_geometry, dt) = merge( diff --git a/examples/hybrid/sphere/baroclinic_wave_rhoe.jl b/examples/hybrid/sphere/baroclinic_wave_rhoe.jl index 3540b77029..6c4f2f83f7 100644 --- a/examples/hybrid/sphere/baroclinic_wave_rhoe.jl +++ b/examples/hybrid/sphere/baroclinic_wave_rhoe.jl @@ -14,7 +14,7 @@ t_end = FT(60 * 60 * 24 * 10) dt = FT(400) dt_save_to_sol = FT(60 * 60 * 24) dt_save_to_disk = FT(0) # 0 means don't save to disk -ode_algorithm = OrdinaryDiffEq.Rosenbrock23 +ode_algorithm = CTS.ARS343 jacobian_flags = (; ∂ᶜ𝔼ₜ∂ᶠ𝕄_mode = :no_∂ᶜp∂ᶜK, ∂ᶠ𝕄ₜ∂ᶜρ_mode = :exact) additional_cache(ᶜlocal_geometry, ᶠlocal_geometry, dt) = merge( diff --git a/examples/hybrid/sphere/baroclinic_wave_rhotheta.jl b/examples/hybrid/sphere/baroclinic_wave_rhotheta.jl index 6d47ead9b2..ea680018c3 100644 --- a/examples/hybrid/sphere/baroclinic_wave_rhotheta.jl +++ b/examples/hybrid/sphere/baroclinic_wave_rhotheta.jl @@ -14,7 +14,7 @@ t_end = FT(60 * 60 * 24 * 10) dt = FT(400) dt_save_to_sol = FT(60 * 60 * 24) dt_save_to_disk = FT(0) # 0 means don't save to disk -ode_algorithm = OrdinaryDiffEq.Rosenbrock23 +ode_algorithm = CTS.ARS343 jacobian_flags = (; ∂ᶜ𝔼ₜ∂ᶠ𝕄_mode = :exact, ∂ᶠ𝕄ₜ∂ᶜρ_mode = :exact) additional_cache(ᶜlocal_geometry, ᶠlocal_geometry, dt) = merge( diff --git a/examples/hybrid/sphere/held_suarez_rhoe.jl b/examples/hybrid/sphere/held_suarez_rhoe.jl index 420e986bc5..fec7075932 100644 --- a/examples/hybrid/sphere/held_suarez_rhoe.jl +++ b/examples/hybrid/sphere/held_suarez_rhoe.jl @@ -14,7 +14,7 @@ t_end = FT(60 * 60 * 24 * 10) dt = FT(400) dt_save_to_sol = FT(60 * 60 * 24) dt_save_to_disk = FT(0) # 0 means don't save to disk -ode_algorithm = OrdinaryDiffEq.Rosenbrock23 +ode_algorithm = CTS.ARS343 jacobian_flags = (; ∂ᶜ𝔼ₜ∂ᶠ𝕄_mode = :no_∂ᶜp∂ᶜK, ∂ᶠ𝕄ₜ∂ᶜρ_mode = :exact) # Additional values required for driver diff --git a/examples/hybrid/sphere/held_suarez_rhoe_int.jl b/examples/hybrid/sphere/held_suarez_rhoe_int.jl index a59b678293..712f43cd2d 100644 --- a/examples/hybrid/sphere/held_suarez_rhoe_int.jl +++ b/examples/hybrid/sphere/held_suarez_rhoe_int.jl @@ -14,7 +14,7 @@ t_end = FT(60 * 60 * 24 * 10) dt = FT(400) dt_save_to_sol = FT(60 * 60 * 24) dt_save_to_disk = FT(0) # 0 means don't save to disk -ode_algorithm = OrdinaryDiffEq.Rosenbrock23 +ode_algorithm = CTS.ARS343 jacobian_flags = (; ∂ᶜ𝔼ₜ∂ᶠ𝕄_mode = :exact, ∂ᶠ𝕄ₜ∂ᶜρ_mode = :exact) additional_cache(ᶜlocal_geometry, ᶠlocal_geometry, dt) = merge( diff --git a/examples/hybrid/sphere/held_suarez_rhotheta.jl b/examples/hybrid/sphere/held_suarez_rhotheta.jl index fb775cfc16..9c22ab0d96 100644 --- a/examples/hybrid/sphere/held_suarez_rhotheta.jl +++ b/examples/hybrid/sphere/held_suarez_rhotheta.jl @@ -15,7 +15,7 @@ t_end = FT(60 * 60 * 24 * 10) dt = FT(400) dt_save_to_sol = FT(60 * 60 * 24) dt_save_to_disk = FT(0) # 0 means don't save to disk -ode_algorithm = OrdinaryDiffEq.Rosenbrock23 +ode_algorithm = CTS.ARS343 jacobian_flags = (; ∂ᶜ𝔼ₜ∂ᶠ𝕄_mode = :exact, ∂ᶠ𝕄ₜ∂ᶜρ_mode = :exact) additional_cache(ᶜlocal_geometry, ᶠlocal_geometry, dt) = merge( diff --git a/examples/hybrid/sphere/held_suarez_rhotheta_scaling.jl b/examples/hybrid/sphere/held_suarez_rhotheta_scaling.jl index c7834e42a6..391a1180c0 100644 --- a/examples/hybrid/sphere/held_suarez_rhotheta_scaling.jl +++ b/examples/hybrid/sphere/held_suarez_rhotheta_scaling.jl @@ -16,7 +16,7 @@ t_end = FT(60 * 60 * 1) dt = FT(100) dt_save_to_sol = FT(60 * 60 * 24) dt_save_to_disk = FT(0) # 0 means don't save to disk -ode_algorithm = OrdinaryDiffEq.Rosenbrock23 +ode_algorithm = CTS.ARS343 jacobian_flags = (; ∂ᶜ𝔼ₜ∂ᶠ𝕄_mode = :exact, ∂ᶠ𝕄ₜ∂ᶜρ_mode = :exact) additional_cache(ᶜlocal_geometry, ᶠlocal_geometry, dt) = merge( diff --git a/examples/hybrid/sphere/held_suarez_rhotheta_tempest.jl b/examples/hybrid/sphere/held_suarez_rhotheta_tempest.jl index 277dc88c58..2de222d8a5 100644 --- a/examples/hybrid/sphere/held_suarez_rhotheta_tempest.jl +++ b/examples/hybrid/sphere/held_suarez_rhotheta_tempest.jl @@ -14,7 +14,7 @@ t_end = FT(60 * 60 * 24 * 10) dt = FT(400) dt_save_to_sol = FT(60 * 60 * 24) dt_save_to_disk = FT(0) # 0 means don't save to disk -ode_algorithm = OrdinaryDiffEq.Rosenbrock23 +ode_algorithm = CTS.ARS343 jacobian_flags = (; ∂ᶜ𝔼ₜ∂ᶠ𝕄_mode = :exact, ∂ᶠ𝕄ₜ∂ᶜρ_mode = :exact) additional_cache(ᶜlocal_geometry, ᶠlocal_geometry, dt) = merge( diff --git a/examples/sphere/shallow_water_cuda.jl b/examples/sphere/shallow_water_cuda.jl index 71fd90637b..20d2dcd8fd 100644 --- a/examples/sphere/shallow_water_cuda.jl +++ b/examples/sphere/shallow_water_cuda.jl @@ -3,6 +3,8 @@ using ClimaComms using DocStringExtensions using LinearAlgebra using ClimaTimeSteppers, DiffEqBase +import OrdinaryDiffEq as ODE +import ClimaTimeSteppers as CTS using DiffEqCallbacks using NVTX @@ -564,12 +566,15 @@ function shallow_water_driver_cuda(ARGS, ::Type{FT}) where {FT} end return nothing end - - prob = - ODEProblem(ClimaODEFunction(; T_exp! = rhs!), Y, (0.0, T), parameters) - integrator = DiffEqBase.init( + prob = ODE.ODEProblem( + CTS.ClimaODEFunction(; T_exp! = rhs!), + Y, + (FT(0), T), + parameters, + ) + integrator = ODE.init( prob, - ExplicitAlgorithm(SSP33ShuOsher()), + CTS.ExplicitAlgorithm(CTS.SSP33ShuOsher()), dt = dt, saveat = [], progress = true, diff --git a/perf/Manifest.toml b/perf/Manifest.toml index 78846156db..7bb6b5f71f 100644 --- a/perf/Manifest.toml +++ b/perf/Manifest.toml @@ -2,7 +2,12 @@ julia_version = "1.8.5" manifest_format = "2.0" -project_hash = "10fc1e8e4023a6e12399288cc9246d605c84fee9" +project_hash = "5fa37272b75429ad2c287f3c80df90e40efce974" + +[[deps.ADTypes]] +git-tree-sha1 = "f5c25e8a5b29b5e941b7408bc8cc79fea4d9ef9a" +uuid = "47edcb42-4c32-4615-8424-f2b9edc5f35b" +version = "0.1.6" [[deps.AMD]] deps = ["Libdl", "LinearAlgebra", "SparseArrays", "Test"] @@ -12,9 +17,9 @@ version = "0.5.0" [[deps.AbstractFFTs]] deps = ["ChainRulesCore", "LinearAlgebra"] -git-tree-sha1 = "16b6dbc4cf7caee4e1e75c49485ec67b667098a0" +git-tree-sha1 = "cad4c758c0038eea30394b1b671526921ca85b21" uuid = "621f4979-c628-5d54-868e-fcf4e3e8185c" -version = "1.3.1" +version = "1.4.0" [[deps.AbstractTrees]] git-tree-sha1 = "faa260e4cb5aba097a73fab382dd4b5819d8ec8c" @@ -38,10 +43,10 @@ uuid = "ec485272-7323-5ecc-a04f-4719b315124d" version = "0.2.0" [[deps.ArrayInterface]] -deps = ["Compat", "IfElse", "LinearAlgebra", "Requires", "SparseArrays", "Static"] -git-tree-sha1 = "1ee88c4c76caa995a885dc2f22a5d548dfbbc0ba" +deps = ["Adapt", "LinearAlgebra", "Requires", "SparseArrays", "SuiteSparse"] +git-tree-sha1 = "f83ec24f76d4c8f525099b2ac475fc098138ec31" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "3.2.2" +version = "7.4.11" [[deps.ArrayInterfaceCore]] deps = ["LinearAlgebra", "SnoopPrecompile", "SparseArrays", "SuiteSparse"] @@ -49,18 +54,6 @@ git-tree-sha1 = "e5f08b5689b1aad068e01751889f2f615c7db36d" uuid = "30b0a656-2188-435a-8636-2ec0e6a096e2" version = "0.1.29" -[[deps.ArrayInterfaceGPUArrays]] -deps = ["Adapt", "ArrayInterfaceCore", "GPUArraysCore", "LinearAlgebra"] -git-tree-sha1 = "fc114f550b93d4c79632c2ada2924635aabfa5ed" -uuid = "6ba088a2-8465-4c0a-af30-387133b534db" -version = "0.2.2" - -[[deps.ArrayInterfaceStaticArraysCore]] -deps = ["ArrayInterfaceCore", "LinearAlgebra", "StaticArraysCore"] -git-tree-sha1 = "01a9f8e6cfc2bfdd01d333f70b8014a04893103c" -uuid = "dd5226c6-a4d4-4bc7-8575-46859f9c95b9" -version = "0.1.4" - [[deps.ArrayLayouts]] deps = ["FillArrays", "LinearAlgebra", "SparseArrays"] git-tree-sha1 = "4aff5fa660eb95c2e0deb6bcdabe4d9a96bc4667" @@ -143,16 +136,16 @@ uuid = "179af706-886a-5703-950a-314cd64e0468" version = "0.1.2" [[deps.CPUSummary]] -deps = ["CpuId", "IfElse", "Static"] -git-tree-sha1 = "a7157ab6bcda173f533db4c93fc8a27a48843757" +deps = ["CpuId", "IfElse", "PrecompileTools", "Static"] +git-tree-sha1 = "89e0654ed8c7aebad6d5ad235d6242c2d737a928" uuid = "2a0fbf3d-bb9c-48f3-b0a9-814d99fd7ab9" -version = "0.1.30" +version = "0.2.3" [[deps.CUDA]] -deps = ["AbstractFFTs", "Adapt", "BFloat16s", "CEnum", "CUDA_Driver_jll", "CUDA_Runtime_Discovery", "CUDA_Runtime_jll", "CompilerSupportLibraries_jll", "ExprTools", "GPUArrays", "GPUCompiler", "KernelAbstractions", "LLVM", "LazyArtifacts", "Libdl", "LinearAlgebra", "Logging", "Preferences", "Printf", "Random", "Random123", "RandomNumbers", "Reexport", "Requires", "SparseArrays", "SpecialFunctions", "UnsafeAtomicsLLVM"] -git-tree-sha1 = "442d989978ed3ff4e174c928ee879dc09d1ef693" +deps = ["AbstractFFTs", "Adapt", "BFloat16s", "CEnum", "CUDA_Driver_jll", "CUDA_Runtime_Discovery", "CUDA_Runtime_jll", "ExprTools", "GPUArrays", "GPUCompiler", "KernelAbstractions", "LLVM", "LazyArtifacts", "Libdl", "LinearAlgebra", "Logging", "Preferences", "Printf", "Random", "Random123", "RandomNumbers", "Reexport", "Requires", "SparseArrays", "SpecialFunctions", "UnsafeAtomicsLLVM"] +git-tree-sha1 = "35160ef0f03b14768abfd68b830f8e3940e8e0dc" uuid = "052768ef-5323-5732-b1bb-66c8b64840ba" -version = "4.3.2" +version = "4.4.0" [[deps.CUDA_Driver_jll]] deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "Pkg"] @@ -191,22 +184,22 @@ uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" version = "1.16.0" [[deps.ChangesOfVariables]] -deps = ["LinearAlgebra", "Test"] -git-tree-sha1 = "f84967c4497e0e1955f9a582c232b02847c5f589" +deps = ["InverseFunctions", "LinearAlgebra", "Test"] +git-tree-sha1 = "2fba81a302a7be671aefe194f0525ef231104e7f" uuid = "9e997f8a-9a97-42d5-a9f1-ce6bfc15e2c0" -version = "0.1.7" +version = "0.1.8" [[deps.ClimaComms]] deps = ["CUDA", "MPI"] -git-tree-sha1 = "483971be380aefef7d576797508c7f3159c39775" +git-tree-sha1 = "6cbe1b835f91033e6326a92ac1a1f6a8c9b2215f" uuid = "3a4d1b5c-c61d-41fd-a00a-5873ba7a1b0d" -version = "0.5.0" +version = "0.5.3" [[deps.ClimaCore]] deps = ["Adapt", "BandedMatrices", "BlockArrays", "CUDA", "ClimaComms", "CubedSphere", "DataStructures", "DiffEqBase", "DocStringExtensions", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "LinearAlgebra", "PkgVersion", "RecursiveArrayTools", "Requires", "RootSolvers", "SparseArrays", "Static", "StaticArrays", "Statistics", "UnPack"] path = ".." uuid = "d414da3d-4745-48bb-8d80-42e94e092884" -version = "0.10.42" +version = "0.10.46" [[deps.ClimaCorePlots]] deps = ["ClimaCore", "RecipesBase", "StaticArrays", "TriplotBase"] @@ -233,10 +226,10 @@ uuid = "595c0a79-7f3d-439a-bc5a-b232dc3bde79" version = "0.7.7" [[deps.CloseOpenIntervals]] -deps = ["ArrayInterface", "Static"] -git-tree-sha1 = "d61300b9895f129f4bd684b2aff97cf319b6c493" +deps = ["Static", "StaticArrayInterface"] +git-tree-sha1 = "70232f82ffaab9dc52585e0dd043b5e0c6b714f1" uuid = "fb6a15b2-703c-40df-9091-08a04967cfa9" -version = "0.1.11" +version = "0.1.12" [[deps.CodeTracking]] deps = ["InteractiveUtils", "UUIDs"] @@ -246,15 +239,15 @@ version = "1.3.1" [[deps.CodecZlib]] deps = ["TranscodingStreams", "Zlib_jll"] -git-tree-sha1 = "9c209fb7536406834aa938fb149964b985de6c83" +git-tree-sha1 = "02aa26a4cf76381be7f66e020a3eddeb27b0a092" uuid = "944b1d66-785c-5afd-91f1-9de20f533193" -version = "0.7.1" +version = "0.7.2" [[deps.ColorSchemes]] deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "PrecompileTools", "Random"] -git-tree-sha1 = "be6ab11021cd29f0344d5c4357b163af05a48cba" +git-tree-sha1 = "dd3000d954d483c1aad05fe1eb9e6a715c97013e" uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4" -version = "3.21.0" +version = "3.22.0" [[deps.ColorTypes]] deps = ["FixedPointNumbers", "Random"] @@ -263,10 +256,10 @@ uuid = "3da002f7-5984-5a60-b8a6-cbb66c0b333f" version = "0.11.4" [[deps.ColorVectorSpace]] -deps = ["ColorTypes", "FixedPointNumbers", "LinearAlgebra", "SpecialFunctions", "Statistics", "TensorCore"] -git-tree-sha1 = "600cc5508d66b78aae350f7accdb58763ac18589" +deps = ["ColorTypes", "FixedPointNumbers", "LinearAlgebra", "Requires", "Statistics", "TensorCore"] +git-tree-sha1 = "a1f44953f2382ebb937d60dafbe2deea4bd23249" uuid = "c3611d14-8923-5661-9e6a-0046d554d3a4" -version = "0.9.10" +version = "0.10.0" [[deps.Colors]] deps = ["ColorTypes", "FixedPointNumbers", "Reexport"] @@ -292,10 +285,10 @@ uuid = "bbf7d656-a473-5ed7-a52c-81e309532950" version = "0.3.0" [[deps.Compat]] -deps = ["Base64", "Dates", "DelimitedFiles", "Distributed", "InteractiveUtils", "LibGit2", "Libdl", "LinearAlgebra", "Markdown", "Mmap", "Pkg", "Printf", "REPL", "Random", "SHA", "Serialization", "SharedArrays", "Sockets", "SparseArrays", "Statistics", "Test", "UUIDs", "Unicode"] -git-tree-sha1 = "6c0100a8cf4ed66f66e2039af7cde3357814bad2" +deps = ["Dates", "LinearAlgebra", "UUIDs"] +git-tree-sha1 = "5ce999a19f4ca23ea484e92a1774a61b8ca4cf8e" uuid = "34da2185-b29b-5c13-b0c7-acf172513d20" -version = "3.46.2" +version = "4.8.0" [[deps.CompilerSupportLibraries_jll]] deps = ["Artifacts", "Libdl"] @@ -309,15 +302,15 @@ version = "0.1.3" [[deps.ConcurrentUtilities]] deps = ["Serialization", "Sockets"] -git-tree-sha1 = "96d823b94ba8d187a6d8f0826e731195a74b90e9" +git-tree-sha1 = "5372dbbf8f0bdb8c700db5367132925c0771ef7e" uuid = "f0e56b4a-5159-44fe-b623-3e5288b988bb" -version = "2.2.0" +version = "2.2.1" [[deps.ConstructionBase]] deps = ["LinearAlgebra"] -git-tree-sha1 = "738fec4d684a9a6ee9598a8bfee305b26831f28c" +git-tree-sha1 = "fe2838a593b5f776e1597e086dcd47560d94e816" uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9" -version = "1.5.2" +version = "1.5.3" [[deps.Contour]] git-tree-sha1 = "d05d9e7b7aedff4e5b51a029dced05cfb6125781" @@ -348,9 +341,9 @@ version = "4.1.1" [[deps.Cthulhu]] deps = ["CodeTracking", "FoldingTrees", "InteractiveUtils", "JuliaSyntax", "PrecompileTools", "Preferences", "REPL", "TypedSyntax", "UUIDs", "Unicode", "WidthLimitedIO"] -git-tree-sha1 = "9b804378bbe126f64ca3b4cd4b5dc9e44ea02f70" +git-tree-sha1 = "a086f0e6bad863055df8aca3dc3786505d5cf06c" uuid = "f68482b8-f384-11e8-15f7-abe071a5a75f" -version = "2.9.1" +version = "2.9.2" [[deps.CubedSphere]] deps = ["Elliptic", "FFTW", "Printf", "ProgressBars", "SpecialFunctions", "TaylorSeries", "Test"] @@ -358,12 +351,6 @@ git-tree-sha1 = "131498c78453d02b4821d8b93f6e44595399f19f" uuid = "7445602f-e544-4518-8976-18f8e8ae6cdb" version = "0.2.3" -[[deps.DEDataArrays]] -deps = ["ArrayInterface", "DocStringExtensions", "LinearAlgebra", "RecursiveArrayTools", "SciMLBase", "StaticArrays"] -git-tree-sha1 = "fb2693e875ba9db2e64b684b2765e210c0d41231" -uuid = "754358af-613d-5f8d-9788-280bf1605d4c" -version = "0.2.4" - [[deps.DataAPI]] git-tree-sha1 = "8da84edb865b0b5b0100c0666a9bc9a0b71c553c" uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a" @@ -371,9 +358,9 @@ version = "1.15.0" [[deps.DataStructures]] deps = ["Compat", "InteractiveUtils", "OrderedCollections"] -git-tree-sha1 = "d1fff3a548102f48987a52a2e0d114fa97d730f0" +git-tree-sha1 = "cf25ccb972fec4e4817764d01c82386ae94f77b4" uuid = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8" -version = "0.18.13" +version = "0.18.14" [[deps.DataValueInterfaces]] git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6" @@ -395,10 +382,10 @@ uuid = "b429d917-457f-4dbc-8f4c-0cc954292b1d" version = "0.4.0" [[deps.DiffEqBase]] -deps = ["ArrayInterface", "ChainRulesCore", "DEDataArrays", "DataStructures", "Distributions", "DocStringExtensions", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "IterativeSolvers", "LabelledArrays", "LinearAlgebra", "Logging", "MuladdMacro", "NonlinearSolve", "Parameters", "PreallocationTools", "Printf", "RecursiveArrayTools", "RecursiveFactorization", "Reexport", "Requires", "SciMLBase", "Setfield", "SparseArrays", "StaticArrays", "Statistics", "SuiteSparse", "ZygoteRules"] -git-tree-sha1 = "bd3812f2be255da87a2438c3b87a0a478cdbd050" +deps = ["ArrayInterface", "ChainRulesCore", "DataStructures", "Distributions", "DocStringExtensions", "EnumX", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "Printf", "RecursiveArrayTools", "Reexport", "Requires", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces", "ZygoteRules"] +git-tree-sha1 = "c5692436e7f8279503466db216c74165d1b301e4" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.84.0" +version = "6.127.0" [[deps.DiffEqCallbacks]] deps = ["DataStructures", "DiffEqBase", "ForwardDiff", "LinearAlgebra", "Markdown", "NLsolve", "Parameters", "RecipesBase", "RecursiveArrayTools", "SciMLBase", "StaticArraysCore"] @@ -408,9 +395,9 @@ version = "2.26.1" [[deps.DiffEqOperators]] deps = ["BandedMatrices", "BlockBandedMatrices", "DiffEqBase", "DomainSets", "ForwardDiff", "LazyArrays", "LazyBandedMatrices", "LinearAlgebra", "LoopVectorization", "NNlib", "Requires", "RuntimeGeneratedFunctions", "SciMLBase", "SparseArrays", "SparseDiffTools", "StaticArrays", "SuiteSparse"] -git-tree-sha1 = "8fec548f61267eb0d04501d3f33e904aeb123b85" +git-tree-sha1 = "ef0f24d69406bf85092c843691ab2ae3b2e34b77" uuid = "9fdde737-9c7f-55bf-ade8-46b3f136cc48" -version = "4.44.0" +version = "4.45.0" [[deps.DiffResults]] deps = ["StaticArraysCore"] @@ -426,9 +413,9 @@ version = "1.15.1" [[deps.Distances]] deps = ["LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI"] -git-tree-sha1 = "49eba9ad9f7ead780bfb7ee319f962c811c6d3b2" +git-tree-sha1 = "b6def76ffad15143924a2199f72a5cd883a2e8a9" uuid = "b4f34e82-e78d-54a5-968a-f98e89d6e8f7" -version = "0.10.8" +version = "0.10.9" [[deps.Distributed]] deps = ["Random", "Serialization", "Sockets"] @@ -436,15 +423,15 @@ uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[deps.Distributions]] deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "Test"] -git-tree-sha1 = "4ed4a6df2548a72f66e03f3a285cd1f3b573035d" +git-tree-sha1 = "e76a3281de2719d7c81ed62c6ea7057380c87b1d" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.96" +version = "0.25.98" [[deps.DocStringExtensions]] deps = ["LibGit2"] -git-tree-sha1 = "b19534d1895d702889b219c382a6e18010797f0b" +git-tree-sha1 = "2fb1e02f2b635d0845df5d7c167fec4dd739b00d" uuid = "ffbed154-4ef7-542d-bbb7-c09d3a79fcae" -version = "0.8.6" +version = "0.9.3" [[deps.DomainSets]] deps = ["CompositeTypes", "IntervalSets", "LinearAlgebra", "Random", "StaticArrays", "Statistics"] @@ -486,15 +473,15 @@ uuid = "2e619515-83b5-522b-bb60-26c02a35a201" version = "2.5.0+0" [[deps.ExponentialUtilities]] -deps = ["Adapt", "ArrayInterfaceCore", "ArrayInterfaceGPUArrays", "GPUArraysCore", "GenericSchur", "LinearAlgebra", "Printf", "SnoopPrecompile", "SparseArrays", "libblastrampoline_jll"] -git-tree-sha1 = "eb58c1e1417a6580b983069f1491ff82c37def2c" +deps = ["Adapt", "ArrayInterface", "GPUArraysCore", "GenericSchur", "LinearAlgebra", "Printf", "SnoopPrecompile", "SparseArrays", "libblastrampoline_jll"] +git-tree-sha1 = "fb7dbef7d2631e2d02c49e2750f7447648b0ec9b" uuid = "d4d017d3-3776-5f7e-afef-a10c40355c18" -version = "1.23.0" +version = "1.24.0" [[deps.ExprTools]] -git-tree-sha1 = "c1d06d129da9f55715c6c212866f5b1bddc5fa00" +git-tree-sha1 = "27415f162e6028e81c72b82ef756bf321213b6ec" uuid = "e2ba6199-217a-4e67-a87a-7c52f15ade04" -version = "0.1.9" +version = "0.1.10" [[deps.FFMPEG]] deps = ["FFMPEG_jll"] @@ -521,16 +508,22 @@ uuid = "f5851436-0d7a-5f13-b9de-f02708fd171a" version = "3.3.10+0" [[deps.FastBroadcast]] -deps = ["LinearAlgebra", "Polyester", "Static", "StrideArraysCore"] -git-tree-sha1 = "2bef6a96059e40dcf7a69c39506672d551fee983" +deps = ["ArrayInterface", "LinearAlgebra", "Polyester", "Static", "StaticArrayInterface", "StrideArraysCore"] +git-tree-sha1 = "aa9925a229d45fe3018715238956766fa21804d1" uuid = "7034ab61-46d4-4ed7-9d0f-46aef9175898" -version = "0.1.17" +version = "0.2.6" [[deps.FastClosures]] git-tree-sha1 = "acebe244d53ee1b461970f8910c235b259e772ef" uuid = "9aa1b823-49e4-5ca5-8b0f-3971ec8bab6a" version = "0.3.2" +[[deps.FastLapackInterface]] +deps = ["LinearAlgebra"] +git-tree-sha1 = "c1293a93193f0ae94be7cf338d33e162c39d8788" +uuid = "29a986be-02c6-4525-aec4-84b980013641" +version = "1.2.9" + [[deps.FileIO]] deps = ["Pkg", "Requires", "UUIDs"] git-tree-sha1 = "299dc33549f68299137e51e6d49a13b5b1da9673" @@ -547,10 +540,10 @@ uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" version = "0.13.11" [[deps.FiniteDiff]] -deps = ["ArrayInterfaceCore", "LinearAlgebra", "Requires", "Setfield", "SparseArrays", "StaticArrays"] -git-tree-sha1 = "04ed1f0029b6b3af88343e439b995141cb0d0b8d" +deps = ["ArrayInterface", "LinearAlgebra", "Requires", "Setfield", "SparseArrays", "StaticArrays"] +git-tree-sha1 = "c6e4a1fbe73b31a3dea94b1da449503b8830c306" uuid = "6a86dc24-6348-571c-b903-95158fe2bd41" -version = "2.17.0" +version = "2.21.1" [[deps.FixedPointNumbers]] deps = ["Statistics"] @@ -589,10 +582,10 @@ uuid = "f6369f11-7733-5829-9624-2563aa707210" version = "0.10.35" [[deps.FreeType2_jll]] -deps = ["Artifacts", "Bzip2_jll", "JLLWrappers", "Libdl", "Pkg", "Zlib_jll"] -git-tree-sha1 = "87eb71354d8ec1a96d4a7636bd57a7347dde3ef9" +deps = ["Artifacts", "Bzip2_jll", "JLLWrappers", "Libdl", "Zlib_jll"] +git-tree-sha1 = "d8db6a5a2fe1381c1ea4ef2cab7c69c2de7f9ea0" uuid = "d7e528f0-a631-5988-bf34-fe36492bcfd7" -version = "2.10.4+0" +version = "2.13.1+0" [[deps.FriBidi_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -635,21 +628,21 @@ version = "0.1.5" [[deps.GPUCompiler]] deps = ["ExprTools", "InteractiveUtils", "LLVM", "Libdl", "Logging", "Scratch", "TimerOutputs", "UUIDs"] -git-tree-sha1 = "cb090aea21c6ca78d59672a7e7d13bd56d09de64" +git-tree-sha1 = "72b2e3c2ba583d1a7aa35129e56cf92e07c083e3" uuid = "61eb1bfa-7361-4325-ad38-22787b887f55" -version = "0.20.3" +version = "0.21.4" [[deps.GR]] deps = ["Artifacts", "Base64", "DelimitedFiles", "Downloads", "GR_jll", "HTTP", "JSON", "Libdl", "LinearAlgebra", "Pkg", "Preferences", "Printf", "Random", "Serialization", "Sockets", "TOML", "Tar", "Test", "UUIDs", "p7zip_jll"] -git-tree-sha1 = "8b8a2fd4536ece6e554168c21860b6820a8a83db" +git-tree-sha1 = "d73afa4a2bb9de56077242d98cf763074ab9a970" uuid = "28b8d3ca-fb5f-59d9-8090-bfdbd6d07a71" -version = "0.72.7" +version = "0.72.9" [[deps.GR_jll]] -deps = ["Artifacts", "Bzip2_jll", "Cairo_jll", "FFMPEG_jll", "Fontconfig_jll", "GLFW_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pixman_jll", "Qt5Base_jll", "Zlib_jll", "libpng_jll"] -git-tree-sha1 = "19fad9cd9ae44847fe842558a744748084a722d1" +deps = ["Artifacts", "Bzip2_jll", "Cairo_jll", "FFMPEG_jll", "Fontconfig_jll", "GLFW_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pixman_jll", "Qt6Base_jll", "Zlib_jll", "libpng_jll"] +git-tree-sha1 = "f61f768bf090d97c532d24b64e07b237e9bb7b6b" uuid = "d2c73de3-f751-5644-a686-071e5b155ba9" -version = "0.72.7+0" +version = "0.72.9+0" [[deps.GaussQuadrature]] deps = ["SpecialFunctions"] @@ -717,9 +710,9 @@ version = "1.12.2+2" [[deps.HTTP]] deps = ["Base64", "CodecZlib", "ConcurrentUtilities", "Dates", "ExceptionUnwrapping", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] -git-tree-sha1 = "2613d054b0e18a3dea99ca1594e9a3960e025da4" +git-tree-sha1 = "cb56ccdd481c0dd7f975ad2b3b62d9eda088f7e2" uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3" -version = "1.9.7" +version = "1.9.14" [[deps.HarfBuzz_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "Graphite2_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg"] @@ -735,9 +728,9 @@ version = "0.1.15" [[deps.HypergeometricFunctions]] deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"] -git-tree-sha1 = "0ec02c648befc2f94156eaef13b0f38106212f3f" +git-tree-sha1 = "f218fe3736ddf977e0e772bc9a586b2383da2685" uuid = "34004b35-14d8-5ef3-9330-4cdb6864b03a" -version = "0.3.17" +version = "0.3.23" [[deps.IfElse]] git-tree-sha1 = "debdd00ffef04665ccbb3e150747a77560e8fad1" @@ -766,15 +759,15 @@ uuid = "b77e0a4c-d291-57a0-90e8-8db25a27a240" [[deps.IntervalSets]] deps = ["Dates", "Random", "Statistics"] -git-tree-sha1 = "16c0cc91853084cb5f58a78bd209513900206ce6" +git-tree-sha1 = "19ef25c6befb8076aefbc6f89d9011b415fb25da" uuid = "8197267c-284f-5f27-9208-e0e47529a953" -version = "0.7.4" +version = "0.7.5" [[deps.InverseFunctions]] deps = ["Test"] -git-tree-sha1 = "6667aadd1cdee2c6cd068128b3d226ebc4fb0c67" +git-tree-sha1 = "eabe3125edba5c9c10b60a160b1779a000dc8b29" uuid = "3587e190-3f89-42d0-90ee-14403ec27112" -version = "0.1.9" +version = "0.1.11" [[deps.IrrationalConstants]] git-tree-sha1 = "630b497eafcc20001bba38a4651b327dcfc491d2" @@ -800,9 +793,9 @@ version = "0.7.14" [[deps.JLD2]] deps = ["FileIO", "MacroTools", "Mmap", "OrderedCollections", "Pkg", "Printf", "Reexport", "Requires", "TranscodingStreams", "UUIDs"] -git-tree-sha1 = "42c17b18ced77ff0be65957a591d34f4ed57c631" +git-tree-sha1 = "aa6ffef1fd85657f4999030c52eaeec22a279738" uuid = "033835bb-8acc-5ee8-8aae-3f567f8a3819" -version = "0.4.31" +version = "0.4.33" [[deps.JLFzf]] deps = ["Pipe", "REPL", "Random", "fzf_jll"] @@ -845,17 +838,29 @@ git-tree-sha1 = "3b993680318327a645c0240baf653433a0f09953" uuid = "70703baa-626e-46a2-a12c-08ffd08c73b4" version = "0.4.5" +[[deps.KLU]] +deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse_jll"] +git-tree-sha1 = "764164ed65c30738750965d55652db9c94c59bfe" +uuid = "ef3ab10e-7fda-4108-b977-705223b18434" +version = "0.4.0" + [[deps.KernelAbstractions]] -deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"] -git-tree-sha1 = "b48617c5d764908b5fac493cd907cf33cc11eec1" +deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "Requires", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"] +git-tree-sha1 = "4c5875e4c228247e1c2b087669846941fb6e0118" uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c" -version = "0.9.6" +version = "0.9.8" [[deps.Krylov]] deps = ["LinearAlgebra", "Printf", "SparseArrays"] -git-tree-sha1 = "0356a64062656b0cbb43c504ad5de338251f4bda" +git-tree-sha1 = "6dc4ad9cd74ad4ca0a8e219e945dbd22039f2125" uuid = "ba0b0d4f-ebba-5204-a429-3ac8c609bfb7" -version = "0.9.1" +version = "0.9.2" + +[[deps.KrylovKit]] +deps = ["ChainRulesCore", "GPUArraysCore", "LinearAlgebra", "Printf"] +git-tree-sha1 = "1a5e1d9941c783b0119897d29f2eb665d876ecf3" +uuid = "0b1a1467-8014-51b9-945f-bf0ae24f4b77" +version = "0.6.0" [[deps.LAME_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -877,15 +882,15 @@ version = "3.0.0+1" [[deps.LLVM]] deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Printf", "Unicode"] -git-tree-sha1 = "5007c1421563108110bbd57f63d8ad4565808818" +git-tree-sha1 = "8695a49bfe05a2dc0feeefd06b4ca6361a018729" uuid = "929cbde3-209d-540e-8aea-75f648917ca0" -version = "5.2.0" +version = "6.1.0" [[deps.LLVMExtra_jll]] deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] -git-tree-sha1 = "1222116d7313cdefecf3d45a2bc1a89c4e7c9217" +git-tree-sha1 = "c35203c1e1002747da220ffc3c0762ce7754b08c" uuid = "dad2f222-ce93-54a1-a47d-0025e8a3acab" -version = "0.0.22+0" +version = "0.0.23+0" [[deps.LLVMOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -904,12 +909,6 @@ git-tree-sha1 = "f2355693d6778a178ade15952b7ac47a4ff97996" uuid = "b964fa9f-0449-5b57-a5c2-d3ea65f4040f" version = "1.3.0" -[[deps.LabelledArrays]] -deps = ["ArrayInterface", "ChainRulesCore", "LinearAlgebra", "MacroTools", "StaticArrays"] -git-tree-sha1 = "1cccf6d366e51fbaf80303158d49bb2171acfeee" -uuid = "2ee39098-c373-598a-b85f-a56591580800" -version = "1.9.0" - [[deps.Latexify]] deps = ["Formatting", "InteractiveUtils", "LaTeXStrings", "MacroTools", "Markdown", "OrderedCollections", "Printf", "Requires"] git-tree-sha1 = "f428ae552340899a935973270b8d98e5a31c49fe" @@ -917,10 +916,16 @@ uuid = "23fbe1c1-3f47-55db-b15f-69d7ec21a316" version = "0.16.1" [[deps.LayoutPointers]] -deps = ["ArrayInterface", "LinearAlgebra", "ManualMemory", "SIMDTypes", "Static"] -git-tree-sha1 = "9e72f9e890c46081dbc0ebeaf6ccaffe16e51626" +deps = ["ArrayInterface", "LinearAlgebra", "ManualMemory", "SIMDTypes", "Static", "StaticArrayInterface"] +git-tree-sha1 = "88b8f66b604da079a627b6fb2860d3704a6729a1" uuid = "10f19ff3-798f-405d-979b-55457f8fc047" -version = "0.1.8" +version = "0.1.14" + +[[deps.Lazy]] +deps = ["MacroTools"] +git-tree-sha1 = "1370f8202dac30758f3c345f9909b97f53d87d3f" +uuid = "50d2b5c4-7a5e-59d5-8109-a42b560f39c0" +version = "0.15.1" [[deps.LazyArrays]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "MacroTools", "MatrixFactorizations", "SparseArrays", "StaticArrays"] @@ -1003,10 +1008,10 @@ uuid = "4b2f31a3-9ecc-558c-b454-b3730dcb73e9" version = "2.35.0+0" [[deps.Libtiff_jll]] -deps = ["Artifacts", "JLLWrappers", "JpegTurbo_jll", "LERC_jll", "Libdl", "Pkg", "Zlib_jll", "Zstd_jll"] -git-tree-sha1 = "3eb79b0ca5764d4799c06699573fd8f533259713" +deps = ["Artifacts", "JLLWrappers", "JpegTurbo_jll", "LERC_jll", "Libdl", "XZ_jll", "Zlib_jll", "Zstd_jll"] +git-tree-sha1 = "2da088d113af58221c52828a80378e16be7d037a" uuid = "89763e89-9b03-5906-acba-b20f662cd828" -version = "4.4.0+0" +version = "4.5.1+1" [[deps.Libuuid_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1036,6 +1041,12 @@ git-tree-sha1 = "a58ab1d18efa0bcf9f0868c6d387e4126dad3e72" uuid = "5c8ed15e-5a4c-59e4-a42b-c7e8811fb125" version = "2.5.2" +[[deps.LinearSolve]] +deps = ["ArrayInterface", "DocStringExtensions", "EnumX", "FastLapackInterface", "GPUArraysCore", "IterativeSolvers", "KLU", "Krylov", "KrylovKit", "LinearAlgebra", "Preferences", "RecursiveFactorization", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SnoopPrecompile", "SparseArrays", "Sparspak", "SuiteSparse", "UnPack"] +git-tree-sha1 = "4a4f8cc7a59fadbb02d1852d1e0cef5dca3a9460" +uuid = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae" +version = "1.42.0" + [[deps.LogExpFunctions]] deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"] git-tree-sha1 = "c3ce8e7420b3a6e071e0fe4745f5d4300e37b13f" @@ -1052,10 +1063,10 @@ uuid = "e6f89c97-d47a-5376-807f-9c37f3926c36" version = "1.0.0" [[deps.LoopVectorization]] -deps = ["ArrayInterface", "CPUSummary", "ChainRulesCore", "CloseOpenIntervals", "DocStringExtensions", "ForwardDiff", "HostCPUFeatures", "IfElse", "LayoutPointers", "LinearAlgebra", "OffsetArrays", "PolyesterWeave", "SIMDDualNumbers", "SLEEFPirates", "SpecialFunctions", "Static", "ThreadingUtilities", "UnPack", "VectorizationBase"] -git-tree-sha1 = "4392c19f0203df81512b6790a0a67446650bdce0" +deps = ["ArrayInterface", "ArrayInterfaceCore", "CPUSummary", "ChainRulesCore", "CloseOpenIntervals", "DocStringExtensions", "ForwardDiff", "HostCPUFeatures", "IfElse", "LayoutPointers", "LinearAlgebra", "OffsetArrays", "PolyesterWeave", "PrecompileTools", "SIMDTypes", "SLEEFPirates", "SpecialFunctions", "Static", "StaticArrayInterface", "ThreadingUtilities", "UnPack", "VectorizationBase"] +git-tree-sha1 = "c88a4afe1703d731b1c4fdf4e3c7e77e3b176ea2" uuid = "bdcacae8-1622-11e9-2a5c-532679323890" -version = "0.12.110" +version = "0.12.165" [[deps.LoweredCodeUtils]] deps = ["JuliaInterpreter"] @@ -1083,9 +1094,9 @@ version = "4.1.2+0" [[deps.MPIPreferences]] deps = ["Libdl", "Preferences"] -git-tree-sha1 = "d86a788b336e8ae96429c0c42740ccd60ac0dfcc" +git-tree-sha1 = "781916a2ebf2841467cda03b6f1af43e23839d85" uuid = "3da0fdf6-3ccc-4f1b-acd9-58baa6c99267" -version = "0.1.8" +version = "0.1.9" [[deps.MPItrampoline_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML"] @@ -1207,16 +1218,16 @@ uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908" version = "1.2.0" [[deps.NonlinearSolve]] -deps = ["ArrayInterfaceCore", "FiniteDiff", "ForwardDiff", "IterativeSolvers", "LinearAlgebra", "RecursiveArrayTools", "RecursiveFactorization", "Reexport", "SciMLBase", "Setfield", "StaticArrays", "UnPack"] -git-tree-sha1 = "a754a21521c0ab48d37f44bbac1eefd1387bdcfc" +deps = ["ArrayInterface", "DiffEqBase", "EnumX", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "LinearSolve", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SnoopPrecompile", "SparseArrays", "SparseDiffTools", "StaticArraysCore", "UnPack"] +git-tree-sha1 = "a6000c813371cd3cd9cbbdf8a356fc3a97138d92" uuid = "8913a72c-1f9b-4ce2-8d82-65094dcecaec" -version = "0.3.22" +version = "1.6.0" [[deps.OffsetArrays]] deps = ["Adapt"] -git-tree-sha1 = "82d7c9e310fe55aa54996e6f7f94674e2a38fcb4" +git-tree-sha1 = "2ac17d29c523ce1cd38e27785a7d23024853a4bb" uuid = "6fe1bfb0-de20-5000-8ca7-80f57d26f881" -version = "1.12.9" +version = "1.12.10" [[deps.Ogg_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1271,15 +1282,15 @@ uuid = "91d4177d-7536-5919-b921-800302f37372" version = "1.3.2+0" [[deps.OrderedCollections]] -git-tree-sha1 = "d321bf2de576bf25ec4d3e4360faca399afca282" +git-tree-sha1 = "2e73fe17cac3c62ad1aebe70d44c963c3cfdc3e3" uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" -version = "1.6.0" +version = "1.6.2" [[deps.OrdinaryDiffEq]] -deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastClosures", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "Polyester", "PreallocationTools", "RecursiveArrayTools", "Reexport", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"] -git-tree-sha1 = "e7c3b814328cce3d22dd635ca547e70a6990993a" +deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "IfElse", "LineSearches", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLNLSolve", "SimpleNonlinearSolve", "SimpleUnPack", "SparseArrays", "SparseDiffTools", "StaticArrayInterface", "StaticArrays", "TruncatedStacktraces"] +git-tree-sha1 = "6ffebfa8971546bace3fc312f9a703795f79f5b9" uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed" -version = "5.71.2" +version = "6.51.2" [[deps.PCRE2_jll]] deps = ["Artifacts", "Libdl"] @@ -1294,9 +1305,15 @@ version = "0.11.17" [[deps.PProf]] deps = ["AbstractTrees", "EnumX", "FlameGraphs", "Libdl", "OrderedCollections", "Profile", "ProgressMeter", "ProtoBuf", "pprof_jll"] -git-tree-sha1 = "16e2ef982c4d637f45553611e96d135490841769" +git-tree-sha1 = "1c650abb80d2a417318a9d303443487b226901cd" uuid = "e4faabce-9ead-11e9-39d9-4379958e3056" -version = "2.2.2" +version = "2.3.0" + +[[deps.PackageExtensionCompat]] +deps = ["Requires", "TOML"] +git-tree-sha1 = "32f3d52212a8d1c5d589a58851b1f04c97339110" +uuid = "65ce6f38-6b18-4e1d-a461-8949797d7930" +version = "1.0.0" [[deps.Pango_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "FriBidi_jll", "Glib_jll", "HarfBuzz_jll", "JLLWrappers", "Libdl", "Pkg"] @@ -1352,27 +1369,27 @@ version = "1.3.5" [[deps.Plots]] deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "UnitfulLatexify", "Unzip"] -git-tree-sha1 = "75ca67b2c6512ad2d0c767a7cfc55e75075f8bbc" +git-tree-sha1 = "9f8675a55b37a70aa23177ec110f6e3f4dd68466" uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" -version = "1.38.16" +version = "1.38.17" [[deps.Polyester]] -deps = ["ArrayInterface", "BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "ManualMemory", "PolyesterWeave", "Requires", "Static", "StrideArraysCore", "ThreadingUtilities"] -git-tree-sha1 = "bfd5fb3376bc084d202c717bbba8c94696755d87" +deps = ["ArrayInterface", "BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "ManualMemory", "PolyesterWeave", "Requires", "Static", "StaticArrayInterface", "StrideArraysCore", "ThreadingUtilities"] +git-tree-sha1 = "3d811babe092a6e7b130beee84998fe7663348b6" uuid = "f517fe37-dbe3-4b94-8317-1923a5111588" -version = "0.6.12" +version = "0.7.5" [[deps.PolyesterWeave]] deps = ["BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "Static", "ThreadingUtilities"] -git-tree-sha1 = "43883d15c7cf16f340b9367c645cf88372f55641" +git-tree-sha1 = "240d7170f5ffdb285f9427b92333c3463bf65bf6" uuid = "1d0040c9-8b98-4ee7-8388-3f51789ca0ad" -version = "0.1.13" +version = "0.2.1" [[deps.PreallocationTools]] -deps = ["Adapt", "ArrayInterface", "ForwardDiff", "LabelledArrays"] -git-tree-sha1 = "6c138c8510111fa47b5d2ed8ada482d97e279bee" +deps = ["Adapt", "ArrayInterface", "ForwardDiff", "Requires"] +git-tree-sha1 = "f739b1b3cc7b9949af3b35089931f2b58c289163" uuid = "d236fae5-4411-538c-8e31-a6e3d9e00b46" -version = "0.2.4" +version = "0.4.12" [[deps.PrecompileTools]] deps = ["Preferences"] @@ -1387,10 +1404,10 @@ uuid = "21216c6a-2e73-6563-6e65-726566657250" version = "1.4.0" [[deps.PrettyTables]] -deps = ["Crayons", "Formatting", "LaTeXStrings", "Markdown", "Reexport", "StringManipulation", "Tables"] -git-tree-sha1 = "213579618ec1f42dea7dd637a42785a608b1ea9c" +deps = ["Crayons", "LaTeXStrings", "Markdown", "Printf", "Reexport", "StringManipulation", "Tables"] +git-tree-sha1 = "ee094908d720185ddbdc58dbe0c1cbe35453ec7a" uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d" -version = "2.2.4" +version = "2.2.7" [[deps.Printf]] deps = ["Unicode"] @@ -1430,11 +1447,11 @@ git-tree-sha1 = "e957b28fc98ecd13da4f2bdc7e121832e5d18e3e" uuid = "3349acd9-ac6a-5e09-bcdb-63829b23a429" version = "1.0.11" -[[deps.Qt5Base_jll]] -deps = ["Artifacts", "CompilerSupportLibraries_jll", "Fontconfig_jll", "Glib_jll", "JLLWrappers", "Libdl", "Libglvnd_jll", "OpenSSL_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libxcb_jll", "Xorg_xcb_util_image_jll", "Xorg_xcb_util_keysyms_jll", "Xorg_xcb_util_renderutil_jll", "Xorg_xcb_util_wm_jll", "Zlib_jll", "xkbcommon_jll"] -git-tree-sha1 = "0c03844e2231e12fda4d0086fd7cbe4098ee8dc5" -uuid = "ea2cea3b-5b76-57ae-a6ef-0a8af62496e1" -version = "5.15.3+2" +[[deps.Qt6Base_jll]] +deps = ["Artifacts", "CompilerSupportLibraries_jll", "Fontconfig_jll", "Glib_jll", "JLLWrappers", "Libdl", "Libglvnd_jll", "OpenSSL_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Xorg_libxcb_jll", "Xorg_xcb_util_image_jll", "Xorg_xcb_util_keysyms_jll", "Xorg_xcb_util_renderutil_jll", "Xorg_xcb_util_wm_jll", "Zlib_jll", "xkbcommon_jll"] +git-tree-sha1 = "364898e8f13f7eaaceec55fd3d08680498c0aa6e" +uuid = "c0090381-4147-56d7-9ebc-da0b1113ec56" +version = "6.4.2+3" [[deps.QuadGK]] deps = ["DataStructures", "LinearAlgebra"] @@ -1475,10 +1492,10 @@ uuid = "01d81517-befc-4cb6-b9ec-a95719d0359c" version = "0.6.12" [[deps.RecursiveArrayTools]] -deps = ["Adapt", "ArrayInterfaceCore", "ArrayInterfaceStaticArraysCore", "ChainRulesCore", "DocStringExtensions", "FillArrays", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "StaticArraysCore", "Statistics", "Tables", "ZygoteRules"] -git-tree-sha1 = "a5ce741acddc02f0d4fc6505463ca89697d7fb23" +deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "Requires", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] +git-tree-sha1 = "7ed35fb5f831aaf09c2d7c8736d44667a1afdcb0" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "2.32.3" +version = "2.38.7" [[deps.RecursiveFactorization]] deps = ["LinearAlgebra", "LoopVectorization", "Polyester", "SnoopPrecompile", "StrideArraysCore", "TriangularSolve"] @@ -1543,12 +1560,6 @@ version = "0.5.11" uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" version = "0.7.0" -[[deps.SIMDDualNumbers]] -deps = ["ForwardDiff", "IfElse", "SLEEFPirates", "VectorizationBase"] -git-tree-sha1 = "dd4195d308df24f33fb10dde7c22103ba88887fa" -uuid = "3cdde19b-5bb0-4aaf-8931-af3e248e098b" -version = "0.1.1" - [[deps.SIMDTypes]] git-tree-sha1 = "330289636fb8107c5f32088d2741e9fd7a061a5c" uuid = "94e857df-77ce-4151-89e5-788b33177be4" @@ -1561,10 +1572,22 @@ uuid = "476501e8-09a2-5ece-8869-fb82de89a1fa" version = "0.6.39" [[deps.SciMLBase]] -deps = ["ArrayInterfaceCore", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "RecipesBase", "RecursiveArrayTools", "StaticArraysCore", "Statistics", "Tables"] -git-tree-sha1 = "f1bc477b771a75178da44adb252fdc70b4b22e24" +deps = ["ADTypes", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] +git-tree-sha1 = "04370090604cd399db5bebddb636d80ab9d338e9" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "1.50.1" +version = "1.94.0" + +[[deps.SciMLNLSolve]] +deps = ["DiffEqBase", "LineSearches", "NLsolve", "Reexport", "SciMLBase"] +git-tree-sha1 = "9dfc8e9e3d58c0c74f1a821c762b5349da13eccf" +uuid = "e9a6253c-8580-4d32-9898-8661bb511710" +version = "0.1.8" + +[[deps.SciMLOperators]] +deps = ["ArrayInterface", "DocStringExtensions", "Lazy", "LinearAlgebra", "Setfield", "SparseArrays", "StaticArraysCore", "Tricks"] +git-tree-sha1 = "6a657a73322170eec86fb427661dbee079b85bff" +uuid = "c0aeaf25-5076-4817-a8d5-81caf7dfa961" +version = "0.2.12" [[deps.Scratch]] deps = ["Dates"] @@ -1576,10 +1599,10 @@ version = "1.2.0" uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b" [[deps.Setfield]] -deps = ["ConstructionBase", "Future", "MacroTools", "Requires"] -git-tree-sha1 = "38d88503f695eb0301479bc9b0d4320b378bafe5" +deps = ["ConstructionBase", "Future", "MacroTools", "StaticArraysCore"] +git-tree-sha1 = "e2cc6d8c88613c05e1defb55170bf5ff211fbeac" uuid = "efcf1570-3423-57d1-acb7-fd33fddbac46" -version = "0.8.2" +version = "1.1.1" [[deps.SharedArrays]] deps = ["Distributed", "Mmap", "Random", "Serialization"] @@ -1596,12 +1619,23 @@ git-tree-sha1 = "874e8867b33a00e784c8a7e4b60afe9e037b74e1" uuid = "777ac1f9-54b0-4bf8-805c-2214025038e7" version = "1.1.0" +[[deps.SimpleNonlinearSolve]] +deps = ["ArrayInterface", "DiffEqBase", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "PackageExtensionCompat", "PrecompileTools", "Reexport", "SciMLBase", "StaticArraysCore"] +git-tree-sha1 = "91fcc402c4ab978ad5759489db9a9c5a71732f2d" +uuid = "727e6d20-b764-4bd8-a329-72de5adea6c7" +version = "0.1.18" + [[deps.SimpleTraits]] deps = ["InteractiveUtils", "MacroTools"] git-tree-sha1 = "5d7e3f4e11935503d3ecaf7186eac40602e7d231" uuid = "699a6c99-e7fa-54fc-8d76-47d257e15c1d" version = "0.9.4" +[[deps.SimpleUnPack]] +git-tree-sha1 = "58e6353e72cde29b90a69527e56df1b5c3d8c437" +uuid = "ce78b400-467f-4804-87d8-8f486da07d0a" +version = "1.1.0" + [[deps.SnoopCompile]] deps = ["AbstractTrees", "Cthulhu", "FlameGraphs", "InteractiveUtils", "JET", "OrderedCollections", "Pkg", "Printf", "Profile", "Requires", "Serialization", "SnoopCompileCore", "YAML"] git-tree-sha1 = "894e542ef8553c82ead28171e6c144d0fb492563" @@ -1635,9 +1669,15 @@ uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" [[deps.SparseDiffTools]] deps = ["Adapt", "ArrayInterface", "Compat", "DataStructures", "FiniteDiff", "ForwardDiff", "Graphs", "LinearAlgebra", "Requires", "SparseArrays", "StaticArrays", "VertexSafeGraphs"] -git-tree-sha1 = "314a07e191ea4a5ea5a2f9d6b39f03833bde5e08" +git-tree-sha1 = "e19ac47477c9a8fcca06dab5e5471417d5d9d723" uuid = "47a9eef4-7e08-11e9-0b38-333d64bd3804" -version = "1.21.0" +version = "1.31.0" + +[[deps.Sparspak]] +deps = ["Libdl", "LinearAlgebra", "Logging", "OffsetArrays", "Printf", "SparseArrays", "Test"] +git-tree-sha1 = "342cf4b449c299d8d1ceaf00b7a49f4fbc7940e7" +uuid = "e56a9233-b9d6-4f03-8d0f-1825330902ac" +version = "0.3.9" [[deps.SpecialFunctions]] deps = ["ChainRulesCore", "IrrationalConstants", "LogExpFunctions", "OpenLibm_jll", "OpenSpecFun_jll"] @@ -1647,20 +1687,26 @@ version = "2.3.0" [[deps.Static]] deps = ["IfElse"] -git-tree-sha1 = "7f5a513baec6f122401abfc8e9c074fdac54f6c1" +git-tree-sha1 = "f295e0a1da4ca425659c57441bcb59abb035a4bc" uuid = "aedffcd0-7271-4cad-89d0-dc628f76c6d3" -version = "0.4.1" +version = "0.8.8" + +[[deps.StaticArrayInterface]] +deps = ["ArrayInterface", "Compat", "IfElse", "LinearAlgebra", "Requires", "SnoopPrecompile", "SparseArrays", "Static", "SuiteSparse"] +git-tree-sha1 = "33040351d2403b84afce74dae2e22d3f5b18edcb" +uuid = "0d7ed370-da01-4f52-bd93-41d350b8b718" +version = "1.4.0" [[deps.StaticArrays]] deps = ["LinearAlgebra", "Random", "StaticArraysCore", "Statistics"] -git-tree-sha1 = "832afbae2a45b4ae7e831f86965469a24d1d8a83" +git-tree-sha1 = "9cabadf6e7cd2349b6cf49f1915ad2028d65e881" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.5.26" +version = "1.6.2" [[deps.StaticArraysCore]] -git-tree-sha1 = "6b7ba252635a5eff6a0b0664a41ee140a1c9e72a" +git-tree-sha1 = "36b3d696ce6366023a0ea192b4cd442268995a0d" uuid = "1e83bf80-4336-4d27-bf5d-d5a4f845583c" -version = "1.4.0" +version = "1.4.2" [[deps.Statistics]] deps = ["LinearAlgebra", "SparseArrays"] @@ -1685,16 +1731,16 @@ uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c" version = "1.3.0" [[deps.StrideArraysCore]] -deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "ManualMemory", "SIMDTypes", "Static", "ThreadingUtilities"] -git-tree-sha1 = "0b1ea3e3fdf93b42e9c0f58347168618b6acc259" +deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "ManualMemory", "SIMDTypes", "Static", "StaticArrayInterface", "ThreadingUtilities"] +git-tree-sha1 = "f02eb61eb5c97b48c153861c72fbbfdddc607e06" uuid = "7792a7ef-975c-4747-a70f-980b88e8d1da" -version = "0.3.17" +version = "0.4.17" [[deps.StringEncodings]] deps = ["Libiconv_jll"] -git-tree-sha1 = "33c0da881af3248dafefb939a21694b97cfece76" +git-tree-sha1 = "b765e46ba27ecf6b44faf70df40c57aa3a547dcb" uuid = "69024149-9ee7-55f6-a4c4-859efe599b68" -version = "0.3.6" +version = "0.3.7" [[deps.StringManipulation]] git-tree-sha1 = "46da2434b41f41ac3594ee9816ce5541c6096123" @@ -1705,6 +1751,17 @@ version = "0.3.0" deps = ["Libdl", "LinearAlgebra", "Serialization", "SparseArrays"] uuid = "4607b0f0-06f3-5cda-b6b1-a6196a1729e9" +[[deps.SuiteSparse_jll]] +deps = ["Artifacts", "Libdl", "Pkg", "libblastrampoline_jll"] +uuid = "bea87d4a-7f5b-5778-9afe-8cc45184846c" +version = "5.10.1+0" + +[[deps.SymbolicIndexingInterface]] +deps = ["DocStringExtensions"] +git-tree-sha1 = "f8ab052bfcbdb9b48fad2c80c873aa0d0344dfe5" +uuid = "2efcf032-c050-4f8e-a9bb-153293bab1f5" +version = "0.2.2" + [[deps.TOML]] deps = ["Dates"] uuid = "fa267f1f-6049-4f14-aa54-33bafae1ed76" @@ -1757,9 +1814,9 @@ uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40" [[deps.ThreadingUtilities]] deps = ["ManualMemory"] -git-tree-sha1 = "c97f60dd4f2331e1a495527f80d242501d2f9865" +git-tree-sha1 = "eda08f7e9818eb53661b3deb74e3159460dfbc27" uuid = "8290d209-cae3-49c0-8002-c8c24d57dab5" -version = "0.5.1" +version = "0.5.2" [[deps.TimerOutputs]] deps = ["ExprTools", "Printf"] @@ -1779,11 +1836,22 @@ git-tree-sha1 = "31eedbc0b6d07c08a700e26d31298ac27ef330eb" uuid = "d5829a12-d9aa-46ab-831f-fb7c9ab06edf" version = "0.1.19" +[[deps.Tricks]] +git-tree-sha1 = "aadb748be58b492045b4f56166b5188aa63ce549" +uuid = "410a4b4d-49e4-4fbc-ab6d-cb71b17b3775" +version = "0.1.7" + [[deps.TriplotBase]] git-tree-sha1 = "4d4ed7f294cda19382ff7de4c137d24d16adc89b" uuid = "981d1d27-644d-49a2-9326-4793e63143c3" version = "0.1.0" +[[deps.TruncatedStacktraces]] +deps = ["InteractiveUtils", "MacroTools", "Preferences"] +git-tree-sha1 = "ea3e54c2bdde39062abf5a9758a23735558705e1" +uuid = "781d530d-4396-4725-bb49-402e4bee1e77" +version = "1.4.0" + [[deps.TypedSyntax]] deps = ["CodeTracking", "JuliaSyntax"] git-tree-sha1 = "e38949656d1443d30339d4fc1088fdc49c8f652e" @@ -1814,10 +1882,10 @@ uuid = "1cfade01-22cf-5700-b092-accc4b62d6e1" version = "0.4.1" [[deps.Unitful]] -deps = ["ConstructionBase", "Dates", "LinearAlgebra", "Random"] -git-tree-sha1 = "ba4aa36b2d5c98d6ed1f149da916b3ba46527b2b" +deps = ["ConstructionBase", "Dates", "InverseFunctions", "LinearAlgebra", "Random"] +git-tree-sha1 = "c4d2a349259c8eba66a00a540d550f122a3ab228" uuid = "1986cc42-f94f-5a68-af5c-568840ba703d" -version = "1.14.0" +version = "1.15.0" [[deps.UnitfulLatexify]] deps = ["LaTeXStrings", "Latexify", "Unitful"] @@ -1832,9 +1900,9 @@ version = "0.2.1" [[deps.UnsafeAtomicsLLVM]] deps = ["LLVM", "UnsafeAtomics"] -git-tree-sha1 = "ea37e6066bf194ab78f4e747f5245261f17a7175" +git-tree-sha1 = "323e3d0acf5e78a56dfae7bd8928c989b4f3083e" uuid = "d80eeb9a-aca5-4d75-85e5-170c8b632249" -version = "0.1.2" +version = "0.1.3" [[deps.Unzip]] git-tree-sha1 = "ca0969166a028236229f63514992fc073799bb78" @@ -1847,10 +1915,10 @@ uuid = "4004b06d-e244-455f-a6ce-a5f9919cc534" version = "1.0.1" [[deps.VectorizationBase]] -deps = ["ArrayInterface", "CPUSummary", "HostCPUFeatures", "IfElse", "LayoutPointers", "Libdl", "LinearAlgebra", "SIMDTypes", "Static"] -git-tree-sha1 = "c95d242ade2d67c1510ce52d107cfca7a83e0b4e" +deps = ["ArrayInterface", "CPUSummary", "HostCPUFeatures", "IfElse", "LayoutPointers", "Libdl", "LinearAlgebra", "SIMDTypes", "Static", "StaticArrayInterface"] +git-tree-sha1 = "b182207d4af54ac64cbc71797765068fdeff475d" uuid = "3d5dd08c-fd9d-11e8-17fa-ed2836048c2f" -version = "0.21.33" +version = "0.21.64" [[deps.VertexSafeGraphs]] deps = ["Graphs"] @@ -1894,17 +1962,23 @@ git-tree-sha1 = "91844873c4085240b95e795f692c4cec4d805f8a" uuid = "aed1982a-8fda-507f-9586-7b0439959a61" version = "1.1.34+0" +[[deps.XZ_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "2222b751598bd9f4885c9ce9cd23e83404baa8ce" +uuid = "ffd25f8a-64ca-5728-b0f7-c24cf3aae800" +version = "5.4.3+1" + [[deps.Xorg_libX11_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libxcb_jll", "Xorg_xtrans_jll"] -git-tree-sha1 = "5be649d550f3f4b95308bf0183b82e2582876527" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libxcb_jll", "Xorg_xtrans_jll"] +git-tree-sha1 = "afead5aba5aa507ad5a3bf01f58f82c8d1403495" uuid = "4f6342f7-b3d2-589e-9d20-edeb45f2b2bc" -version = "1.6.9+4" +version = "1.8.6+0" [[deps.Xorg_libXau_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "4e490d5c960c314f33885790ed410ff3a94ce67e" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "6035850dcc70518ca32f012e46015b9beeda49d8" uuid = "0c0b7dd1-d40b-584c-a123-a41640f87eec" -version = "1.0.9+4" +version = "1.0.11+0" [[deps.Xorg_libXcursor_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libXfixes_jll", "Xorg_libXrender_jll"] @@ -1913,10 +1987,10 @@ uuid = "935fb764-8cf2-53bf-bb30-45bb1f8bf724" version = "1.2.0+4" [[deps.Xorg_libXdmcp_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "4fe47bd2247248125c428978740e18a681372dd4" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "34d526d318358a859d7de23da945578e8e8727b7" uuid = "a3789734-cfe1-5b06-b2d0-1dd0d9d62d05" -version = "1.1.3+4" +version = "1.1.4+0" [[deps.Xorg_libXext_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libX11_jll"] @@ -1955,22 +2029,22 @@ uuid = "ea2f1a96-1ddc-540d-b46f-429655e07cfa" version = "0.9.10+4" [[deps.Xorg_libpthread_stubs_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "6783737e45d3c59a4a4c4091f5f88cdcf0908cbb" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "8fdda4c692503d44d04a0603d9ac0982054635f9" uuid = "14d82f49-176c-5ed1-bb49-ad3f5cbd8c74" -version = "0.1.0+3" +version = "0.1.1+0" [[deps.Xorg_libxcb_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "XSLT_jll", "Xorg_libXau_jll", "Xorg_libXdmcp_jll", "Xorg_libpthread_stubs_jll"] -git-tree-sha1 = "daf17f441228e7a3833846cd048892861cff16d6" +deps = ["Artifacts", "JLLWrappers", "Libdl", "XSLT_jll", "Xorg_libXau_jll", "Xorg_libXdmcp_jll", "Xorg_libpthread_stubs_jll"] +git-tree-sha1 = "b4bfde5d5b652e22b9c790ad00af08b6d042b97d" uuid = "c7cfdc94-dc32-55de-ac96-5a1b8d977c5b" -version = "1.13.0+3" +version = "1.15.0+0" [[deps.Xorg_libxkbfile_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libX11_jll"] -git-tree-sha1 = "926af861744212db0eb001d9e40b5d16292080b2" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libX11_jll"] +git-tree-sha1 = "730eeca102434283c50ccf7d1ecdadf521a765a4" uuid = "cc61e674-0454-545c-8b26-ed2c68acab7a" -version = "1.1.0+4" +version = "1.1.2+0" [[deps.Xorg_xcb_util_image_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_xcb_util_jll"] @@ -2003,22 +2077,22 @@ uuid = "c22f9ab0-d5fe-5066-847c-f4bb1cd4e361" version = "0.4.1+1" [[deps.Xorg_xkbcomp_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libxkbfile_jll"] -git-tree-sha1 = "4bcbf660f6c2e714f87e960a171b119d06ee163b" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libxkbfile_jll"] +git-tree-sha1 = "330f955bc41bb8f5270a369c473fc4a5a4e4d3cb" uuid = "35661453-b289-5fab-8a00-3d9160c6a3a4" -version = "1.4.2+4" +version = "1.4.6+0" [[deps.Xorg_xkeyboard_config_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_xkbcomp_jll"] -git-tree-sha1 = "5c8424f8a67c3f2209646d4425f3d415fee5931d" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_xkbcomp_jll"] +git-tree-sha1 = "691634e5453ad362044e2ad653e79f3ee3bb98c3" uuid = "33bec58e-1273-512f-9401-5d533626f822" -version = "2.27.0+4" +version = "2.39.0+0" [[deps.Xorg_xtrans_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "79c31e7844f6ecf779705fbc12146eb190b7d845" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "e92a1a012a10506618f10b7047e478403a046c77" uuid = "c5fb5394-a638-5e4d-96e5-b29de1b5cf10" -version = "1.4.0+3" +version = "1.5.0+0" [[deps.YAML]] deps = ["Base64", "Dates", "Printf", "StringEncodings"] diff --git a/perf/Project.toml b/perf/Project.toml index ce41f2347d..237fd2e879 100644 --- a/perf/Project.toml +++ b/perf/Project.toml @@ -38,8 +38,3 @@ TerminalLoggers = "5d786b92-1e48-4d6f-9151-6b4477ca9bed" Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40" URIs = "5c2747f8-b7ea-4ff2-ba2e-563bfd36b1d4" UnPack = "3a884ed6-31ef-47d7-9d2a-63182c4928ed" - -[compat] -OrdinaryDiffEq = "5.64.0" -Plots = "1.30.1" -SciMLBase = "<1.51"