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Incorrect field name Loqusdb somatic SV annotations #1353

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ivadym opened this issue Jan 12, 2024 · 0 comments · Fixed by #1354
Closed

Incorrect field name Loqusdb somatic SV annotations #1353

ivadym opened this issue Jan 12, 2024 · 0 comments · Fixed by #1354
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ivadym commented Jan 12, 2024 •
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Describe the bug

Scout requires the following naming convention for Loqusdb annotations (i.e. Cancer_Somatic_Obs):

This hasnt't been considered when implementing SV Loqusdb annotations (somatic_obs) in #1194.

Version (please complete the following information):
balsamic --version 13.0.0 (release)
@ivadym ivadym added the Bug Something isn't working label Jan 12, 2024
@ivadym ivadym added this to BALSAMIC Jan 12, 2024
@github-project-automation github-project-automation bot moved this to Todo in BALSAMIC Jan 12, 2024
@ivadym ivadym mentioned this issue Jan 12, 2024
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@ivadym ivadym linked a pull request Jan 12, 2024 that will close this issue
fix: Loqusdb SV annotations #1354
Merged
3 tasks
@ivadym ivadym self-assigned this Jan 12, 2024
@ivadym ivadym closed this as completed Jan 12, 2024
@github-project-automation github-project-automation bot moved this from Todo to Completed in BALSAMIC Jan 12, 2024
@ivadym ivadym moved this from Completed to Archived in BALSAMIC Jan 22, 2024
@pbiology pbiology removed this from BALSAMIC Jan 23, 2024
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fix: Loqusdb SV annotations Clinical-Genomics/BALSAMIC
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