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Mark trimmed concatenated files as temporary and remove #911

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ashwini06 opened this issue Apr 12, 2022 · 1 comment
Closed

Mark trimmed concatenated files as temporary and remove #911

ashwini06 opened this issue Apr 12, 2022 · 1 comment

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@ashwini06
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Currently, the fastp rule https://github.com/Clinical-Genomics/BALSAMIC/blob/master/BALSAMIC/snakemake_rules/quality_control/fastp.rule generates intermediate files .umi_optimized.fastq.gz and .fp.fastq.gz, which can be marked as temporary and removed from the balsamic analysis when the whole analysis is finished.

Related to Clinical-Genomics/cg#1259
@ashwini06 ashwini06 mentioned this issue Apr 12, 2022
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@ashwini06 ashwini06 mentioned this issue Apr 21, 2022
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@ashwini06
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Fixed in #915

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