diff --git a/BALSAMIC/containers/annotate/annotate.yaml b/BALSAMIC/containers/annotate/annotate.yaml
index 9421b9d8b..f39d020b4 100644
--- a/BALSAMIC/containers/annotate/annotate.yaml
+++ b/BALSAMIC/containers/annotate/annotate.yaml
@@ -9,3 +9,5 @@ dependencies:
   - bcftools>=1.10
   - vcfanno=0.3.2
   - gxx_linux-64 
+  - pip:
+    - git+https://github.com/NBISweden/vcf2cytosure@0.5.1
diff --git a/BALSAMIC/utils/cli.py b/BALSAMIC/utils/cli.py
index 576d2c499..768b37e23 100644
--- a/BALSAMIC/utils/cli.py
+++ b/BALSAMIC/utils/cli.py
@@ -447,6 +447,8 @@ def get_bioinfo_tools_version(bioinfo_tools: dict,
         with open(yaml_file, "r") as f:
             packages = yaml.safe_load(f).get("dependencies")
             for p in packages:
+                if isinstance(p, dict):
+                    continue
                 name = p.split("=")[0]
                 version = "=".join(p.split("=")[1:])
                 if name not in bioinfo_tools:
@@ -621,4 +623,4 @@ def create_pon_fastq_symlink(pon_fastqs, symlink_dir):
             LOG.info(f"Creating symlink {fastq_name} -> {pon_sym_file}")
             os.symlink(pon_fastq, pon_sym_file)
         except FileExistsError:
-            LOG.info(f"File {pon_sym_file} exists, skipping")
\ No newline at end of file
+            LOG.info(f"File {pon_sym_file} exists, skipping")
diff --git a/CHANGELOG.rst b/CHANGELOG.rst
index d5f2b35e6..757b1a27c 100644
--- a/CHANGELOG.rst
+++ b/CHANGELOG.rst
@@ -7,6 +7,7 @@ Added:
 * samtools flagstats and stats to workflow and MultiQC
 * PASSed SV calls from Manta to clinical delivery
 * An extra filter to VarDict tumor-normal to remove variants with STATUS=Germline, all other will still be around
+* Added ``vcf2cytosure``` to annotate container
 
 
 Changed: