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Remco de Boer <29308176+redeboer@users.noreply.github.com> Date: Thu, 19 Dec 2024 15:14:03 +0100 Subject: [PATCH 02/18] DX: implement hash test for `FrozenDict` --- tests/unit/test_topology.py | 36 +++++++++++++++++++++++++++++++++++- 1 file changed, 35 insertions(+), 1 deletion(-) diff --git a/tests/unit/test_topology.py b/tests/unit/test_topology.py index 427500c3..4193ddb6 100644 --- a/tests/unit/test_topology.py +++ b/tests/unit/test_topology.py @@ -1,12 +1,14 @@ +import pickle # noqa: S403 import typing import pytest +import xxhash from attrs.exceptions import FrozenInstanceError from IPython.lib.pretty import pretty from qrules.topology import ( Edge, - FrozenDict, # noqa: F401 # pyright: ignore[reportUnusedImport] + FrozenDict, # pyright: ignore[reportUnusedImport] InteractionNode, MutableTopology, SimpleStateTransitionTopologyBuilder, @@ -39,6 +41,23 @@ def test_immutability(self): edge.ending_node_id += 1 +class TestFrozenDict: + def test_hash(self): + obj: FrozenDict = FrozenDict({}) + assert _compute_hash(obj) == "023f1d9cf3576a46b278007d6e5cb0fa" + + obj = FrozenDict({"key1": "value1"}) + assert _compute_hash(obj) == "1f57a8e372e93eeacabfe613606e4589" + + obj = FrozenDict({ + "key1": "value1", + "key2": 2, + "key3": (1, 2, 3), + "key4": FrozenDict({"nested_key": "nested_value"}), + }) + assert _compute_hash(obj) == "b74cfc0efac6a26f73b541fab5c090d7" + + class TestInteractionNode: def test_constructor_exceptions(self): with pytest.raises(TypeError): @@ -188,6 +207,9 @@ def test_constructor_exceptions(self, nodes, edges): ): assert Topology(nodes, edges) + def test_hash(self, two_to_three_decay: Topology): + assert _compute_hash(two_to_three_decay) == "dc775dcdd565524839511b0160f5f769" + @pytest.mark.parametrize("repr_method", [repr, pretty]) def test_repr_and_eq(self, repr_method, two_to_three_decay: Topology): topology = eval(repr_method(two_to_three_decay)) @@ -299,3 +321,15 @@ def test_create_n_body_topology(n_initial: int, n_final: int, exception): assert len(topology.outgoing_edge_ids) == n_final assert len(topology.intermediate_edge_ids) == 0 assert len(topology.nodes) == 1 + + +def _compute_hash(obj) -> str: + b = _to_bytes(obj) + h = xxhash.xxh128(b) + return h.hexdigest() + + +def _to_bytes(obj) -> bytes: + if isinstance(obj, bytes | bytearray): + return obj + return pickle.dumps(obj) From 6958d4b9f5fc7b0d6304180c4c10c721b16651ab Mon Sep 17 00:00:00 2001 From: Remco de Boer <29308176+redeboer@users.noreply.github.com> Date: Thu, 19 Dec 2024 15:14:04 +0100 Subject: [PATCH 03/18] DX: add hash test for `ReactionInfo` --- tests/unit/test_transition.py | 21 +++++++++++++++++++++ 1 file changed, 21 insertions(+) diff --git a/tests/unit/test_transition.py b/tests/unit/test_transition.py index dc9b19ad..6f1b6a2b 100644 --- a/tests/unit/test_transition.py +++ b/tests/unit/test_transition.py @@ -1,8 +1,10 @@ # pyright: reportUnusedImport=false +import pickle # noqa: S403 from copy import deepcopy from fractions import Fraction import pytest +import xxhash from IPython.lib.pretty import pretty from qrules.particle import Parity, Particle, ParticleCollection, Spin # noqa: F401 @@ -44,6 +46,13 @@ def test_repr(self, repr_method, reaction: ReactionInfo): def test_hash(self, reaction: ReactionInfo): assert hash(deepcopy(reaction)) == hash(reaction) + def test_xxhash(self, reaction: ReactionInfo): + expected_hash = { + "canonical-helicity": "aec1f862660cf20e802d68c59d1a06ff", + "helicity": "c5b8b4c9bd3f50ed5e987443c277391c", + }[reaction.formalism] + assert _compute_hash(reaction) == expected_hash + class TestState: @pytest.mark.parametrize( @@ -106,3 +115,15 @@ def test_regex_pattern(self): "Delta(1900)++", "Delta(1920)++", ] + + +def _compute_hash(obj) -> str: + b = _to_bytes(obj) + h = xxhash.xxh128(b) + return h.hexdigest() + + +def _to_bytes(obj) -> bytes: + if isinstance(obj, bytes | bytearray): + return obj + return pickle.dumps(obj) From 2194d7fc361ee2c51787eb1d0c4d1092431ad3a6 Mon Sep 17 00:00:00 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"attrs" }, + { name = "frozendict" }, { name = "jsonschema" }, { name = "particle" }, { name = "python-constraint" }, @@ -2067,7 +2095,6 @@ viz = [ [package.dev-dependencies] dev = [ - { name = "graphviz" }, { name = "ipython" }, { name = "ipywidgets" }, { name = "jupyterlab" }, @@ -2085,6 +2112,7 @@ dev = [ { name = "pytest-xdist" }, { name = "python-lsp-ruff" }, { name = "python-lsp-server", extra = ["rope"] }, + { name = "qrules", extra = ["viz"] }, { name = "ruff" }, { name = "sphinx" }, { name = "sphinx-api-relink" }, @@ -2104,8 +2132,8 @@ dev = [ { name = "xxhash" }, ] doc = [ - { name = "graphviz" }, { name = "myst-nb" }, + { name = "qrules", extra = ["viz"] }, { name = "sphinx" }, { name = "sphinx-api-relink" }, { name = "sphinx-book-theme" }, @@ -2120,7 +2148,6 @@ doc = [ { name = "sphinxcontrib-bibtex" }, ] jupyter = [ - { name = "graphviz" }, { name = "ipywidgets" }, { name = "jupyterlab" }, { name = "jupyterlab-code-formatter" }, @@ -2129,9 +2156,10 @@ jupyter = [ { name = "jupyterlab-myst" }, { name = "python-lsp-ruff" }, { name = "python-lsp-server", extra = ["rope"] }, + { name = "qrules", extra = ["viz"] }, ] notebooks = [ - { name = "graphviz" }, + { name = "qrules", extra = ["viz"] }, ] style = [ { name = "ipython" }, @@ -2164,6 +2192,7 @@ types = [ [package.metadata] requires-dist = [ { name = "attrs", specifier = ">=20.1.0" }, + { name = "frozendict" }, { name = "graphviz", marker = "extra == 'viz'" }, { name = "jsonschema" }, { name = "particle" }, From 47e0c29bc4d89b0215e8d730fe9e4858067d1e88 Mon Sep 17 00:00:00 2001 From: Remco de Boer <29308176+redeboer@users.noreply.github.com> Date: Thu, 19 Dec 2024 15:14:05 +0100 Subject: [PATCH 05/18] ENH: inherit `FrozenDict` from `frozendict` --- src/qrules/topology.py | 59 +++-------------------------------- tests/unit/test_topology.py | 8 ++--- tests/unit/test_transition.py | 4 +-- 3 files changed, 10 insertions(+), 61 deletions(-) diff --git a/src/qrules/topology.py b/src/qrules/topology.py index 56437568..6f263650 100644 --- a/src/qrules/topology.py +++ b/src/qrules/topology.py @@ -27,19 +27,12 @@ import attrs from attrs import define, field, frozen from attrs.validators import deep_iterable, deep_mapping, instance_of +from frozendict import frozendict from qrules._implementers import implement_pretty_repr if TYPE_CHECKING: - from collections.abc import ( - ItemsView, - Iterable, - Iterator, - KeysView, - Mapping, - Sequence, - ValuesView, - ) + from collections.abc import Iterable, Mapping, Sequence from IPython.lib.pretty import PrettyPrinter @@ -56,31 +49,8 @@ def __lt__(self, other: Any) -> bool: ... @total_ordering -class FrozenDict(abc.Hashable, abc.Mapping, Generic[KT, VT]): - """An **immutable** and **hashable** version of a `dict`. - - `FrozenDict` makes it possible to make classes hashable if they are decorated with - :func:`attr.frozen` and contain `~typing.Mapping`-like attributes. If these - attributes were to be implemented with a normal `dict`, the instance is strictly - speaking still mutable (even if those attributes are a `property`) and the class is - therefore not safely hashable. - - .. warning:: The keys have to be comparable, that is, they need to have a - :meth:`~object.__lt__` method. - """ - - def __init__(self, mapping: Mapping | None = None) -> None: - self.__mapping: dict[KT, VT] = {} - if mapping is not None: - self.__mapping = dict(mapping) - self.__hash = hash(None) - if len(self.__mapping) != 0: - self.__hash = 0 - for key_value_pair in self.items(): - self.__hash ^= hash(key_value_pair) - - def __repr__(self) -> str: - return f"{type(self).__name__}({self.__mapping})" +class FrozenDict(frozendict, Generic[KT, VT]): + """A sortable version of `frozendict _`.""" def _repr_pretty_(self, p: PrettyPrinter, cycle: bool) -> None: class_name = type(self).__name__ @@ -96,15 +66,6 @@ def _repr_pretty_(self, p: PrettyPrinter, cycle: bool) -> None: p.breakable() p.text("})") - def __iter__(self) -> Iterator[KT]: - return iter(self.__mapping) - - def __len__(self) -> int: - return len(self.__mapping) - - def __getitem__(self, key: KT) -> VT: - return self.__mapping[key] - def __gt__(self, other: Any) -> bool: if isinstance(other, abc.Mapping): sorted_self = _convert_mapping_to_sorted_tuple(self) @@ -117,18 +78,6 @@ def __gt__(self, other: Any) -> bool: ) raise NotImplementedError(msg) - def __hash__(self) -> int: - return self.__hash - - def keys(self) -> KeysView[KT]: - return self.__mapping.keys() - - def items(self) -> ItemsView[KT, VT]: - return self.__mapping.items() - - def values(self) -> ValuesView[VT]: - return self.__mapping.values() - def _convert_mapping_to_sorted_tuple( mapping: Mapping[KT, VT], diff --git a/tests/unit/test_topology.py b/tests/unit/test_topology.py index 4193ddb6..f13aaade 100644 --- a/tests/unit/test_topology.py +++ b/tests/unit/test_topology.py @@ -44,10 +44,10 @@ def test_immutability(self): class TestFrozenDict: def test_hash(self): obj: FrozenDict = FrozenDict({}) - assert _compute_hash(obj) == "023f1d9cf3576a46b278007d6e5cb0fa" + assert _compute_hash(obj) == "458fa667e2b581f54c06f5d6f85a0329" obj = FrozenDict({"key1": "value1"}) - assert _compute_hash(obj) == "1f57a8e372e93eeacabfe613606e4589" + assert _compute_hash(obj) == "ebbfce37fe77355d4e07479243089a6f" obj = FrozenDict({ "key1": "value1", @@ -55,7 +55,7 @@ def test_hash(self): "key3": (1, 2, 3), "key4": FrozenDict({"nested_key": "nested_value"}), }) - assert _compute_hash(obj) == "b74cfc0efac6a26f73b541fab5c090d7" + assert _compute_hash(obj) == "309fd50095a37aa32e31f1068d7a9b4e" class TestInteractionNode: @@ -208,7 +208,7 @@ def test_constructor_exceptions(self, nodes, edges): assert Topology(nodes, edges) def test_hash(self, two_to_three_decay: Topology): - assert _compute_hash(two_to_three_decay) == "dc775dcdd565524839511b0160f5f769" + assert _compute_hash(two_to_three_decay) == "5f55e8b64bcb177cf0984c985d8673fa" @pytest.mark.parametrize("repr_method", [repr, pretty]) def test_repr_and_eq(self, repr_method, two_to_three_decay: Topology): diff --git a/tests/unit/test_transition.py b/tests/unit/test_transition.py index 6f1b6a2b..ae55b710 100644 --- a/tests/unit/test_transition.py +++ b/tests/unit/test_transition.py @@ -48,8 +48,8 @@ def test_hash(self, reaction: ReactionInfo): def test_xxhash(self, reaction: ReactionInfo): expected_hash = { - "canonical-helicity": "aec1f862660cf20e802d68c59d1a06ff", - "helicity": "c5b8b4c9bd3f50ed5e987443c277391c", + "canonical-helicity": "de995528a15267dd3a72fe6c5dfa6136", + "helicity": "61c08ea813390cfbae8b083a89a5673a", }[reaction.formalism] assert _compute_hash(reaction) == expected_hash From 4516fe87392261cdaa773cf75a589437ef622fd2 Mon Sep 17 00:00:00 2001 From: GitHub Date: Thu, 19 Dec 2024 14:27:00 +0000 Subject: [PATCH 06/18] MAINT: update lock files --- .pre-commit-config.yaml | 18 +- uv.lock | 1199 ++++++++++++++++++++++----------------- 2 files changed, 694 insertions(+), 523 deletions(-) diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index 2a2c50ab..4806162e 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -14,7 +14,7 @@ repos: - id: check-useless-excludes - repo: https://github.com/ComPWA/policy - rev: 0.5.6 + rev: 0.5.8 hooks: - id: check-dev-files args: @@ -33,7 +33,7 @@ repos: - --extras-require=doc,viz - repo: https://github.com/kynan/nbstripout - rev: 0.8.0 + rev: 0.8.1 hooks: - id: nbstripout args: @@ -61,7 +61,7 @@ repos: metadata.vscode - repo: https://github.com/astral-sh/ruff-pre-commit - rev: v0.7.2 + rev: v0.8.4 hooks: - id: ruff args: [--fix] @@ -93,7 +93,7 @@ repos: - id: trailing-whitespace - repo: https://github.com/ComPWA/prettier-pre-commit - rev: v3.3.3 + rev: v3.4.2 hooks: - id: prettier @@ -103,14 +103,14 @@ repos: - id: taplo-format - repo: https://github.com/pappasam/toml-sort - rev: v0.23.1 + rev: v0.24.2 hooks: - id: toml-sort args: - --in-place - repo: https://github.com/python-jsonschema/check-jsonschema - rev: 0.29.4 + rev: 0.30.0 hooks: - id: check-jsonschema name: Check CITATION.cff @@ -123,7 +123,7 @@ repos: pass_filenames: false - repo: https://github.com/streetsidesoftware/cspell-cli - rev: v8.15.3 + rev: v8.17.0 hooks: - id: cspell @@ -149,11 +149,11 @@ repos: - python - repo: https://github.com/ComPWA/pyright-pre-commit - rev: v1.1.388 + rev: v1.1.391 hooks: - id: pyright - repo: https://github.com/astral-sh/uv-pre-commit - rev: 0.4.30 + rev: 0.5.10 hooks: - id: uv-lock diff --git a/uv.lock b/uv.lock index 6d9d8f2b..e39ecac7 100644 --- a/uv.lock +++ b/uv.lock @@ -1,8 +1,9 @@ version = 1 requires-python = ">=3.9" resolution-markers = [ - "python_full_version < '3.12'", + "python_full_version >= '3.10' and python_full_version < '3.12'", "python_full_version >= '3.12'", + "python_full_version < '3.10'", ] [manifest] @@ -24,24 +25,40 @@ wheels = [ name = "alabaster" version = "0.7.16" source = { registry = 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--- a/.vscode/extensions.json +++ b/.vscode/extensions.json @@ -13,6 +13,7 @@ "ms-python.mypy-type-checker", "ms-python.python", "ms-python.vscode-pylance", + "ms-toolsai.jupyter", "ms-vscode.live-server", "ms-vsliveshare.vsliveshare", "redhat.vscode-yaml", diff --git a/pyproject.toml b/pyproject.toml index 0dfac5f8..b182404c 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -345,7 +345,7 @@ split-on-trailing-comma = false "PLW0603", "S101", "T20", - "TCH00", + "TC00", ] "docs/*" = [ "E402", diff --git a/src/qrules/io/_dot.py b/src/qrules/io/_dot.py index 2b6a9b20..e1398afa 100644 --- a/src/qrules/io/_dot.py +++ b/src/qrules/io/_dot.py @@ -183,8 +183,7 @@ def _create_graphviz_edge( self, from_node: str, to_node: str, label: str = "" ) -> str: style = dict(self.edge_style) # copy - if "label" in style: - del style["label"] + style.pop("label", None) if label: style["label"] = label styling = _create_graphviz_styling(style) From d6263abc864f3c65147f7de40ffd8bde227d009d Mon Sep 17 00:00:00 2001 From: GitHub Date: Thu, 19 Dec 2024 14:30:49 +0000 Subject: [PATCH 08/18] MAINT: implement updates from pre-commit hooks --- uv.lock | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/uv.lock b/uv.lock index e39ecac7..2ea78fac 100644 --- a/uv.lock +++ b/uv.lock @@ -2151,7 +2151,7 @@ wheels = [ [[package]] name = "qrules" -version = "0.10.2" +version = "0.0" source = { editable = "." } dependencies = [ { name = "attrs" }, From c6aeaf6a832b7ae4b71090c155a9edf94825e934 Mon Sep 17 00:00:00 2001 From: GitHub Date: Thu, 19 Dec 2024 14:31:42 +0000 Subject: [PATCH 09/18] MAINT: update lock files --- uv.lock | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/uv.lock b/uv.lock index 2ea78fac..e39ecac7 100644 --- a/uv.lock +++ b/uv.lock @@ -2151,7 +2151,7 @@ wheels = [ [[package]] name = "qrules" -version = "0.0" +version = "0.10.2" source = { editable = "." } dependencies = [ { name = "attrs" }, From 9084093d8cb6a411f36531026a3d43b86757c961 Mon Sep 17 00:00:00 2001 From: "pre-commit-ci[bot]" <66853113+pre-commit-ci[bot]@users.noreply.github.com> Date: Thu, 19 Dec 2024 14:32:53 +0000 Subject: [PATCH 10/18] [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci --- .vscode/extensions.json | 1 + 1 file changed, 1 insertion(+) diff --git a/.vscode/extensions.json b/.vscode/extensions.json index 62b8b553..874ef1d7 100644 --- a/.vscode/extensions.json +++ b/.vscode/extensions.json @@ -14,6 +14,7 @@ "ms-python.python", "ms-python.vscode-pylance", "ms-toolsai.jupyter", + "ms-toolsai.vscode-jupyter-cell-tags", "ms-vscode.live-server", "ms-vsliveshare.vsliveshare", "redhat.vscode-yaml", From eed5b465352f2c647bb62319eded017e9222700c Mon Sep 17 00:00:00 2001 From: Remco de Boer <29308176+redeboer@users.noreply.github.com> Date: Thu, 19 Dec 2024 15:40:26 +0100 Subject: [PATCH 11/18] MAINT: address PYI066 https://docs.astral.sh/ruff/rules/bad-version-info-order/ --- src/qrules/particle.py | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/src/qrules/particle.py b/src/qrules/particle.py index cb382963..49072a7e 100644 --- a/src/qrules/particle.py +++ b/src/qrules/particle.py @@ -29,10 +29,10 @@ from qrules.conservation_rules import GellMannNishijimaInput, gellmann_nishijima from qrules.quantum_numbers import Parity, _float_as_signed_str -if sys.version_info < (3, 11): - from typing_extensions import Self -else: +if sys.version_info >= (3, 11): from typing import Self +else: + from typing_extensions import Self if TYPE_CHECKING: from collections.abc import Iterable, Iterator From 74348aaecae35a8e00fc2c24bcb840d4767a749c Mon Sep 17 00:00:00 2001 From: Remco de Boer <29308176+redeboer@users.noreply.github.com> Date: Thu, 19 Dec 2024 15:39:19 +0100 Subject: [PATCH 12/18] MAINT: sort cSpell config --- .cspell.json | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/.cspell.json b/.cspell.json index 59ad8b23..7a6fc1eb 100644 --- a/.cspell.json +++ b/.cspell.json @@ -145,6 +145,7 @@ "ylim" ], "language": "en-US", + "useGitignore": true, "version": "0.2", "words": [ "blatt", @@ -201,6 +202,5 @@ "venv", "weisskopf", "Zenodo" - ], - "useGitignore": true + ] } From 8b6b445d81e8a49a3502393f6ed95bcbde7bcac9 Mon Sep 17 00:00:00 2001 From: Remco de Boer <29308176+redeboer@users.noreply.github.com> Date: Thu, 19 Dec 2024 15:54:30 +0100 Subject: [PATCH 13/18] FIX: install `xxhash` in `types` group --- pyproject.toml | 1 + uv.lock | 4 ++++ 2 files changed, 5 insertions(+) diff --git a/pyproject.toml b/pyproject.toml index b182404c..69de241e 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -120,6 +120,7 @@ types = [ "sphinx-api-relink", "types-PyYAML", "types-setuptools", + "xxhash", ] [tool.setuptools] diff --git a/uv.lock b/uv.lock index e39ecac7..f8704dbf 100644 --- a/uv.lock +++ b/uv.lock @@ -2248,6 +2248,7 @@ style = [ { name = "sphinx-api-relink" }, { name = "types-pyyaml" }, { name = "types-setuptools" }, + { name = "xxhash" }, ] test = [ { name = "ipython", version = "8.18.1", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version < '3.10'" }, @@ -2268,6 +2269,7 @@ types = [ { name = "sphinx-api-relink" }, { name = "types-pyyaml" }, { name = "types-setuptools" }, + { name = "xxhash" }, ] [package.metadata] @@ -2356,6 +2358,7 @@ style = [ { name = "sphinx-api-relink" }, { name = "types-pyyaml" }, { name = "types-setuptools" }, + { name = "xxhash" }, ] test = [ { name = "ipython" }, @@ -2374,6 +2377,7 @@ types = [ { name = "sphinx-api-relink" }, { name = "types-pyyaml" }, { name = "types-setuptools" }, + { name = "xxhash" }, ] [[package]] From 4ca6816c63974932cc8af202fbe5ac44e9357552 Mon Sep 17 00:00:00 2001 From: GitHub Date: Thu, 19 Dec 2024 20:48:36 +0000 Subject: [PATCH 14/18] MAINT: update lock files --- uv.lock | 18 +++++++++--------- 1 file changed, 9 insertions(+), 9 deletions(-) diff --git a/uv.lock b/uv.lock index f8704dbf..959a6bbb 100644 --- a/uv.lock +++ b/uv.lock @@ 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Subject: [PATCH 15/18] DX: remove `files.watcherExclude` --- .vscode/settings.json | 6 ------ 1 file changed, 6 deletions(-) diff --git a/.vscode/settings.json b/.vscode/settings.json index fb9dcf04..a7e89e37 100644 --- a/.vscode/settings.json +++ b/.vscode/settings.json @@ -33,12 +33,6 @@ "coverage-gutters.showLineCoverage": true, "diffEditor.experimental.showMoves": true, "editor.formatOnSave": true, - "files.watcherExclude": { - "**/*_cache/**": true, - "**/.eggs/**": true, - "**/.git/**": true, - "**/.tox/**": true - }, "git.rebaseWhenSync": true, "github-actions.workflows.pinned.workflows": [".github/workflows/ci.yml"], "gitlens.telemetry.enabled": false, From df3efb1be3232cc52673a6bc1e2e51ac1d13a857 Mon Sep 17 00:00:00 2001 From: Remco de Boer <29308176+redeboer@users.noreply.github.com> Date: Thu, 19 Dec 2024 21:59:02 +0100 Subject: [PATCH 16/18] FIX: avoid links to `frozendict` API --- docs/conf.py | 19 +++++++------------ src/qrules/topology.py | 2 +- 2 files changed, 8 insertions(+), 13 deletions(-) diff --git a/docs/conf.py b/docs/conf.py index e9ffff96..cc6c3271 100644 --- a/docs/conf.py +++ b/docs/conf.py @@ -18,7 +18,7 @@ from _extend_docstrings import extend_docstrings # noqa: PLC2701 -def pick_newtype_attrs(some_type: type) -> list: +def __get_newtypes(some_type: type) -> list: return [ attr for attr in dir(some_type) @@ -278,25 +278,20 @@ def pick_newtype_attrs(some_type: type) -> list: nb_execution_show_tb = True nb_execution_timeout = -1 nb_output_stderr = "remove" - - -nitpick_temp_names = [ - *pick_newtype_attrs(EdgeQuantumNumbers), - *pick_newtype_attrs(NodeQuantumNumbers), -] -nitpick_temp_patterns = [ - (r"py:(class|obj)", r"qrules\.quantum_numbers\." + name) - for name in nitpick_temp_names -] nitpick_ignore_regex = [ (r"py:(class|obj)", "json.encoder.JSONEncoder"), + (r"py:(class|obj)", r"frozendict(\.frozendict)?"), (r"py:(class|obj)", r"qrules\.topology\.EdgeType"), (r"py:(class|obj)", r"qrules\.topology\.KT"), (r"py:(class|obj)", r"qrules\.topology\.NewEdgeType"), (r"py:(class|obj)", r"qrules\.topology\.NewNodeType"), (r"py:(class|obj)", r"qrules\.topology\.NodeType"), (r"py:(class|obj)", r"qrules\.topology\.VT"), - *nitpick_temp_patterns, + *[ + (r"py:(class|obj)", r"qrules\.quantum_numbers\." + name) + for name in __get_newtypes(EdgeQuantumNumbers) + + __get_newtypes(NodeQuantumNumbers) + ], ] nitpicky = True primary_domain = "py" diff --git a/src/qrules/topology.py b/src/qrules/topology.py index 6f263650..bb69981b 100644 --- a/src/qrules/topology.py +++ b/src/qrules/topology.py @@ -50,7 +50,7 @@ def __lt__(self, other: Any) -> bool: ... @total_ordering class FrozenDict(frozendict, Generic[KT, VT]): - """A sortable version of `frozendict _`.""" + """A sortable version of :code:`frozendict`.""" def _repr_pretty_(self, p: PrettyPrinter, cycle: bool) -> None: class_name = type(self).__name__ From 581657a38ec646098eb104811570f4139fbb77fe Mon Sep 17 00:00:00 2001 From: Remco de Boer <29308176+redeboer@users.noreply.github.com> Date: Thu, 19 Dec 2024 22:17:44 +0100 Subject: [PATCH 17/18] ENH: remove `xxhash` dependency --- pyproject.toml | 2 - tests/unit/test_topology.py | 12 ++-- tests/unit/test_transition.py | 10 ++-- uv.lock | 101 ---------------------------------- 4 files changed, 11 insertions(+), 114 deletions(-) diff --git a/pyproject.toml b/pyproject.toml index 69de241e..3af42c7d 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -111,7 +111,6 @@ test = [ "pytest-cov", "pytest-profiling", "pytest-xdist", - "xxhash", ] types = [ "ipython", @@ -120,7 +119,6 @@ types = [ "sphinx-api-relink", "types-PyYAML", "types-setuptools", - "xxhash", ] [tool.setuptools] diff --git a/tests/unit/test_topology.py b/tests/unit/test_topology.py index f13aaade..f85d2069 100644 --- a/tests/unit/test_topology.py +++ b/tests/unit/test_topology.py @@ -1,8 +1,8 @@ +import hashlib import pickle # noqa: S403 import typing import pytest -import xxhash from attrs.exceptions import FrozenInstanceError from IPython.lib.pretty import pretty @@ -44,10 +44,10 @@ def test_immutability(self): class TestFrozenDict: def test_hash(self): obj: FrozenDict = FrozenDict({}) - assert _compute_hash(obj) == "458fa667e2b581f54c06f5d6f85a0329" + assert _compute_hash(obj) == "067705e70d037311d05daae1e32e1fce" obj = FrozenDict({"key1": "value1"}) - assert _compute_hash(obj) == "ebbfce37fe77355d4e07479243089a6f" + assert _compute_hash(obj) == "56b0520e2a3af550c0f488cd5de2d474" obj = FrozenDict({ "key1": "value1", @@ -55,7 +55,7 @@ def test_hash(self): "key3": (1, 2, 3), "key4": FrozenDict({"nested_key": "nested_value"}), }) - assert _compute_hash(obj) == "309fd50095a37aa32e31f1068d7a9b4e" + assert _compute_hash(obj) == "8568f73c07fce099311f010061f070c6" class TestInteractionNode: @@ -208,7 +208,7 @@ def test_constructor_exceptions(self, nodes, edges): assert Topology(nodes, edges) def test_hash(self, two_to_three_decay: Topology): - assert _compute_hash(two_to_three_decay) == "5f55e8b64bcb177cf0984c985d8673fa" + assert _compute_hash(two_to_three_decay) == "cbaea5d94038a3ad30888014a7b3ae20" @pytest.mark.parametrize("repr_method", [repr, pretty]) def test_repr_and_eq(self, repr_method, two_to_three_decay: Topology): @@ -325,7 +325,7 @@ def test_create_n_body_topology(n_initial: int, n_final: int, exception): def _compute_hash(obj) -> str: b = _to_bytes(obj) - h = xxhash.xxh128(b) + h = hashlib.md5(b) # noqa: S324 return h.hexdigest() diff --git a/tests/unit/test_transition.py b/tests/unit/test_transition.py index ae55b710..dab38d54 100644 --- a/tests/unit/test_transition.py +++ b/tests/unit/test_transition.py @@ -1,10 +1,10 @@ # pyright: reportUnusedImport=false +import hashlib import pickle # noqa: S403 from copy import deepcopy from fractions import Fraction import pytest -import xxhash from IPython.lib.pretty import pretty from qrules.particle import Parity, Particle, ParticleCollection, Spin # noqa: F401 @@ -46,10 +46,10 @@ def test_repr(self, repr_method, reaction: ReactionInfo): def test_hash(self, reaction: ReactionInfo): assert hash(deepcopy(reaction)) == hash(reaction) - def test_xxhash(self, reaction: ReactionInfo): + def test_hash_value(self, reaction: ReactionInfo): expected_hash = { - "canonical-helicity": "de995528a15267dd3a72fe6c5dfa6136", - "helicity": "61c08ea813390cfbae8b083a89a5673a", + "canonical-helicity": "65106a44301f9340e633d09f66ad7d17", + "helicity": "9646d3ee5c5e8534deb8019435161f2e", }[reaction.formalism] assert _compute_hash(reaction) == expected_hash @@ -119,7 +119,7 @@ def test_regex_pattern(self): def _compute_hash(obj) -> str: b = _to_bytes(obj) - h = xxhash.xxh128(b) + h = hashlib.md5(b) # noqa: S324 return h.hexdigest() diff --git a/uv.lock b/uv.lock index 959a6bbb..8831163b 100644 --- a/uv.lock +++ b/uv.lock @@ -2206,7 +2206,6 @@ dev = [ { name = "sphinxcontrib-bibtex" }, { name = "types-pyyaml" }, { name = "types-setuptools" }, - { name = "xxhash" }, ] doc = [ { name = "myst-nb" }, @@ -2248,7 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Remco de Boer <29308176+redeboer@users.noreply.github.com> Date: Thu, 19 Dec 2024 22:32:37 +0100 Subject: [PATCH 18/18] DX: unset `PYTHONHASHSEED` --- .envrc | 2 -- .github/workflows/ci.yml | 3 --- .pre-commit-config.yaml | 1 - 3 files changed, 6 deletions(-) diff --git a/.envrc b/.envrc index 4f10d2fa..41fd2cab 100644 --- a/.envrc +++ b/.envrc @@ -1,4 +1,2 @@ uv sync --all-extras --quiet source .venv/bin/activate - -export PYTHONHASHSEED=0 diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index 67b2d7dc..d807b613 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -5,9 +5,6 @@ concurrency: cancel-in-progress: |- ${{ github.ref != format('refs/heads/{0}', github.event.repository.default_branch) }} -env: - PYTHONHASHSEED: "0" - on: push: branches: diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index 4806162e..af28ca76 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -19,7 +19,6 @@ repos: - id: check-dev-files args: - --doc-apt-packages=graphviz - - --environment-variables=PYTHONHASHSEED=0 - --repo-name=qrules - --repo-title=QRules - --update-lock-files=outsource