diff --git a/.constraints/py3.10.txt b/.constraints/py3.10.txt index 0d0bd5b9..5d11a4af 100644 --- a/.constraints/py3.10.txt +++ b/.constraints/py3.10.txt @@ -9,7 +9,7 @@ accessible-pygments==0.0.4 alabaster==0.7.13 ampform==0.14.6 anyio==3.7.1 -argon2-cffi==21.3.0 +argon2-cffi==23.1.0 argon2-cffi-bindings==21.2.0 arrow==1.2.3 asttokens==2.2.1 @@ -24,30 +24,30 @@ bleach==6.0.0 cachetools==5.3.1 certifi==2023.7.22 cffi==1.15.1 -cfgv==3.3.1 +cfgv==3.4.0 chardet==5.2.0 charset-normalizer==3.2.0 -click==8.1.6 +click==8.1.7 cloudpickle==2.2.1 colorama==0.4.6 comm==0.1.4 contourpy==1.1.0 -coverage==7.2.7 +coverage==7.3.0 cycler==0.11.0 -debugpy==1.6.7 +debugpy==1.6.7.post1 decorator==5.1.1 defusedxml==0.7.1 deprecated==1.2.14 distlib==0.3.7 dm-tree==0.1.8 docutils==0.19 -exceptiongroup==1.1.2 +exceptiongroup==1.1.3 execnet==2.0.2 executing==1.2.0 fastjsonschema==2.18.0 filelock==3.12.2 flatbuffers==23.5.26 -fonttools==4.42.0 +fonttools==4.42.1 fqdn==1.5.1 gast==0.4.0 google-auth==2.22.0 @@ -55,13 +55,13 @@ google-auth-oauthlib==1.0.0 google-pasta==0.2.0 graphviz==0.20.1 greenlet==2.0.2 -grpcio==1.56.2 +grpcio==1.57.0 h5py==3.9.0 hepunits==2.3.2 -identify==2.5.26 +identify==2.5.27 idna==3.4 imagesize==1.4.1 -iminuit==2.23.0 +iminuit==2.24.0 importlib-metadata==6.8.0 iniconfig==2.0.0 ipykernel==6.25.1 @@ -85,16 +85,16 @@ jupyter-console==6.6.3 jupyter-core==5.3.1 jupyter-events==0.7.0 jupyter-lsp==2.2.0 -jupyter-server==2.7.0 +jupyter-server==2.7.2 jupyter-server-terminals==0.4.4 -jupyterlab==4.0.4 +jupyterlab==4.0.5 jupyterlab-code-formatter==2.2.1 jupyterlab-myst==2.0.1 jupyterlab-pygments==0.2.2 jupyterlab-server==2.24.0 jupyterlab-widgets==3.0.8 keras==2.13.1 -kiwisolver==1.4.4 +kiwisolver==1.4.5 libclang==16.0.6 livereload==2.6.3 llvmlite==0.40.1 @@ -108,14 +108,14 @@ mdurl==0.1.2 mistune==3.0.1 ml-dtypes==0.2.0 mpmath==1.3.0 -mypy==1.4.1 +mypy==1.5.1 mypy-extensions==1.0.0 myst-nb==0.17.2 myst-parser==0.18.1 nbclient==0.6.8 -nbconvert==7.7.3 +nbconvert==7.7.4 nbformat==5.9.2 -nbmake==1.4.1 +nbmake==1.4.3 nest-asyncio==1.5.7 nodeenv==1.8.0 notebook==7.0.2 @@ -140,7 +140,7 @@ pluggy==1.2.0 pre-commit==3.3.3 prometheus-client==0.17.1 prompt-toolkit==3.0.39 -protobuf==4.23.4 +protobuf==4.24.1 psutil==5.9.5 ptyprocess==0.7.0 pure-eval==0.2.2 @@ -148,11 +148,10 @@ py-cpuinfo==9.0.0 pyasn1==0.5.0 pyasn1-modules==0.3.0 pycparser==2.21 -pydantic==1.10.12 pydata-sphinx-theme==0.13.3 pygments==2.16.1 pyparsing==3.0.9 -pyproject-api==1.5.3 +pyproject-api==1.5.4 pytest==7.4.0 pytest-benchmark==4.0.0 pytest-cov==4.1.0 @@ -163,7 +162,7 @@ python-dateutil==2.8.2 python-json-logger==2.0.7 pytz==2023.3 pyyaml==6.0.1 -pyzmq==25.1.0 +pyzmq==25.1.1 qrules==0.9.8 qtconsole==5.4.3 qtpy==2.3.1 @@ -174,8 +173,8 @@ rfc3339-validator==0.1.4 rfc3986-validator==0.1.1 rpds-py==0.9.2 rsa==4.9 -ruff==0.0.282 -scipy==1.11.1 +ruff==0.0.285 +scipy==1.11.2 send2trash==1.8.2 six==1.16.0 sniffio==1.3.0 @@ -190,14 +189,14 @@ sphinx-copybutton==0.5.2 sphinx-design==0.5.0 sphinx-thebe==0.2.1 sphinx-togglebutton==0.3.2 -sphinxcontrib-applehelp==1.0.4 -sphinxcontrib-devhelp==1.0.2 -sphinxcontrib-htmlhelp==2.0.1 +sphinxcontrib-applehelp==1.0.7 +sphinxcontrib-devhelp==1.0.5 +sphinxcontrib-htmlhelp==2.0.4 sphinxcontrib-jsmath==1.0.1 -sphinxcontrib-qthelp==1.0.3 -sphinxcontrib-serializinghtml==1.1.5 +sphinxcontrib-qthelp==1.0.6 +sphinxcontrib-serializinghtml==1.1.9 sphobjinv==2.3.1 -sqlalchemy==2.0.19 +sqlalchemy==2.0.20 stack-data==0.6.2 sympy==1.12 tabulate==0.9.0 @@ -211,27 +210,27 @@ termcolor==2.3.0 terminado==0.17.1 tinycss2==1.2.1 tomli==2.0.1 -tornado==6.3.2 -tox==4.6.4 -tqdm==4.65.0 +tornado==6.3.3 +tox==4.10.0 +tqdm==4.66.1 traitlets==5.9.0 -types-docutils==0.20.0.1 +types-docutils==0.20.0.3 types-pkg-resources==0.1.3 types-pyyaml==6.0.12.11 types-requests==2.31.0.2 -types-setuptools==68.0.0.3 +types-setuptools==68.1.0.0 types-urllib3==1.26.25.14 typing-extensions==4.5.0 tzdata==2023.3 uri-template==1.3.0 urllib3==1.26.16 -virtualenv==20.24.2 +virtualenv==20.24.3 wcwidth==0.2.6 webcolors==1.13 webencodings==0.5.1 -websocket-client==1.6.1 -werkzeug==2.3.6 -wheel==0.41.1 +websocket-client==1.6.2 +werkzeug==2.3.7 +wheel==0.41.2 widgetsnbextension==4.0.8 wrapt==1.15.0 zipp==3.16.2 diff --git a/.constraints/py3.11.txt b/.constraints/py3.11.txt index 47b2eb0c..5c29e92e 100644 --- a/.constraints/py3.11.txt +++ b/.constraints/py3.11.txt @@ -9,7 +9,7 @@ accessible-pygments==0.0.4 alabaster==0.7.13 ampform==0.14.6 anyio==3.7.1 -argon2-cffi==21.3.0 +argon2-cffi==23.1.0 argon2-cffi-bindings==21.2.0 arrow==1.2.3 asttokens==2.2.1 @@ -24,17 +24,17 @@ bleach==6.0.0 cachetools==5.3.1 certifi==2023.7.22 cffi==1.15.1 -cfgv==3.3.1 +cfgv==3.4.0 chardet==5.2.0 charset-normalizer==3.2.0 -click==8.1.6 +click==8.1.7 cloudpickle==2.2.1 colorama==0.4.6 comm==0.1.4 contourpy==1.1.0 -coverage==7.2.7 +coverage==7.3.0 cycler==0.11.0 -debugpy==1.6.7 +debugpy==1.6.7.post1 decorator==5.1.1 defusedxml==0.7.1 deprecated==1.2.14 @@ -46,7 +46,7 @@ executing==1.2.0 fastjsonschema==2.18.0 filelock==3.12.2 flatbuffers==23.5.26 -fonttools==4.42.0 +fonttools==4.42.1 fqdn==1.5.1 gast==0.4.0 google-auth==2.22.0 @@ -54,13 +54,13 @@ google-auth-oauthlib==1.0.0 google-pasta==0.2.0 graphviz==0.20.1 greenlet==2.0.2 -grpcio==1.56.2 +grpcio==1.57.0 h5py==3.9.0 hepunits==2.3.2 -identify==2.5.26 +identify==2.5.27 idna==3.4 imagesize==1.4.1 -iminuit==2.23.0 +iminuit==2.24.0 importlib-metadata==6.8.0 iniconfig==2.0.0 ipykernel==6.25.1 @@ -84,16 +84,16 @@ jupyter-console==6.6.3 jupyter-core==5.3.1 jupyter-events==0.7.0 jupyter-lsp==2.2.0 -jupyter-server==2.7.0 +jupyter-server==2.7.2 jupyter-server-terminals==0.4.4 -jupyterlab==4.0.4 +jupyterlab==4.0.5 jupyterlab-code-formatter==2.2.1 jupyterlab-myst==2.0.1 jupyterlab-pygments==0.2.2 jupyterlab-server==2.24.0 jupyterlab-widgets==3.0.8 keras==2.13.1 -kiwisolver==1.4.4 +kiwisolver==1.4.5 libclang==16.0.6 livereload==2.6.3 llvmlite==0.40.1 @@ -107,14 +107,14 @@ mdurl==0.1.2 mistune==3.0.1 ml-dtypes==0.2.0 mpmath==1.3.0 -mypy==1.4.1 +mypy==1.5.1 mypy-extensions==1.0.0 myst-nb==0.17.2 myst-parser==0.18.1 nbclient==0.6.8 -nbconvert==7.7.3 +nbconvert==7.7.4 nbformat==5.9.2 -nbmake==1.4.1 +nbmake==1.4.3 nest-asyncio==1.5.7 nodeenv==1.8.0 notebook==7.0.2 @@ -139,7 +139,7 @@ pluggy==1.2.0 pre-commit==3.3.3 prometheus-client==0.17.1 prompt-toolkit==3.0.39 -protobuf==4.23.4 +protobuf==4.24.1 psutil==5.9.5 ptyprocess==0.7.0 pure-eval==0.2.2 @@ -147,11 +147,10 @@ py-cpuinfo==9.0.0 pyasn1==0.5.0 pyasn1-modules==0.3.0 pycparser==2.21 -pydantic==1.10.12 pydata-sphinx-theme==0.13.3 pygments==2.16.1 pyparsing==3.0.9 -pyproject-api==1.5.3 +pyproject-api==1.5.4 pytest==7.4.0 pytest-benchmark==4.0.0 pytest-cov==4.1.0 @@ -162,7 +161,7 @@ python-dateutil==2.8.2 python-json-logger==2.0.7 pytz==2023.3 pyyaml==6.0.1 -pyzmq==25.1.0 +pyzmq==25.1.1 qrules==0.9.8 qtconsole==5.4.3 qtpy==2.3.1 @@ -173,8 +172,8 @@ rfc3339-validator==0.1.4 rfc3986-validator==0.1.1 rpds-py==0.9.2 rsa==4.9 -ruff==0.0.282 -scipy==1.11.1 +ruff==0.0.285 +scipy==1.11.2 send2trash==1.8.2 six==1.16.0 sniffio==1.3.0 @@ -189,14 +188,14 @@ sphinx-copybutton==0.5.2 sphinx-design==0.5.0 sphinx-thebe==0.2.1 sphinx-togglebutton==0.3.2 -sphinxcontrib-applehelp==1.0.4 -sphinxcontrib-devhelp==1.0.2 -sphinxcontrib-htmlhelp==2.0.1 +sphinxcontrib-applehelp==1.0.7 +sphinxcontrib-devhelp==1.0.5 +sphinxcontrib-htmlhelp==2.0.4 sphinxcontrib-jsmath==1.0.1 -sphinxcontrib-qthelp==1.0.3 -sphinxcontrib-serializinghtml==1.1.5 +sphinxcontrib-qthelp==1.0.6 +sphinxcontrib-serializinghtml==1.1.9 sphobjinv==2.3.1 -sqlalchemy==2.0.19 +sqlalchemy==2.0.20 stack-data==0.6.2 sympy==1.12 tabulate==0.9.0 @@ -209,27 +208,27 @@ tensorflow-probability==0.21.0 termcolor==2.3.0 terminado==0.17.1 tinycss2==1.2.1 -tornado==6.3.2 -tox==4.6.4 -tqdm==4.65.0 +tornado==6.3.3 +tox==4.10.0 +tqdm==4.66.1 traitlets==5.9.0 -types-docutils==0.20.0.1 +types-docutils==0.20.0.3 types-pkg-resources==0.1.3 types-pyyaml==6.0.12.11 types-requests==2.31.0.2 -types-setuptools==68.0.0.3 +types-setuptools==68.1.0.0 types-urllib3==1.26.25.14 typing-extensions==4.5.0 tzdata==2023.3 uri-template==1.3.0 urllib3==1.26.16 -virtualenv==20.24.2 +virtualenv==20.24.3 wcwidth==0.2.6 webcolors==1.13 webencodings==0.5.1 -websocket-client==1.6.1 -werkzeug==2.3.6 -wheel==0.41.1 +websocket-client==1.6.2 +werkzeug==2.3.7 +wheel==0.41.2 widgetsnbextension==4.0.8 wrapt==1.15.0 zipp==3.16.2 diff --git a/.constraints/py3.7.txt b/.constraints/py3.7.txt index 6104c580..e53bfa32 100644 --- a/.constraints/py3.7.txt +++ b/.constraints/py3.7.txt @@ -11,7 +11,7 @@ aiosqlite==0.19.0 alabaster==0.7.13 ampform==0.14.6 anyio==3.7.1 -argon2-cffi==21.3.0 +argon2-cffi==23.1.0 argon2-cffi-bindings==21.2.0 arrow==1.2.3 astunparse==1.6.3 @@ -28,13 +28,13 @@ cffi==1.15.1 cfgv==3.3.1 chardet==5.2.0 charset-normalizer==3.2.0 -click==8.1.6 +click==8.1.7 cloudpickle==2.2.1 colorama==0.4.6 comm==0.1.4 coverage==7.2.7 cycler==0.11.0 -debugpy==1.6.7 +debugpy==1.6.7.post1 decorator==5.1.1 defusedxml==0.7.1 deprecated==1.2.14 @@ -42,7 +42,7 @@ distlib==0.3.7 dm-tree==0.1.8 docutils==0.19 entrypoints==0.4 -exceptiongroup==1.1.2 +exceptiongroup==1.1.3 execnet==2.0.2 fastjsonschema==2.18.0 filelock==3.12.2 @@ -55,7 +55,7 @@ google-auth-oauthlib==0.4.6 google-pasta==0.2.0 graphviz==0.20.1 greenlet==2.0.2 -grpcio==1.56.2 +grpcio==1.57.0 h5py==3.8.0 hepunits==2.3.2 identify==2.5.24 @@ -95,7 +95,7 @@ jupyterlab-pygments==0.2.2 jupyterlab-server==2.24.0 jupyterlab-widgets==3.0.8 keras==2.11.0 -kiwisolver==1.4.4 +kiwisolver==1.4.5 libclang==16.0.6 livereload==2.6.3 llvmlite==0.39.1 @@ -173,7 +173,7 @@ requests-oauthlib==1.3.1 rfc3339-validator==0.1.4 rfc3986-validator==0.1.1 rsa==4.9 -ruff==0.0.282 +ruff==0.0.285 scipy==1.7.3 send2trash==1.8.2 singledispatchmethod==1.0 @@ -212,26 +212,26 @@ terminado==0.17.1 tinycss2==1.2.1 tomli==2.0.1 tornado==6.2 -tox==4.6.4 -tqdm==4.65.0 +tox==4.8.0 +tqdm==4.66.1 traitlets==5.9.0 typed-ast==1.5.5 -types-docutils==0.20.0.1 +types-docutils==0.20.0.3 types-pkg-resources==0.1.3 types-pyyaml==6.0.12.11 types-requests==2.31.0.2 -types-setuptools==68.0.0.3 +types-setuptools==68.1.0.0 types-urllib3==1.26.25.14 typing-extensions==4.7.1 uri-template==1.3.0 urllib3==1.26.16 -virtualenv==20.24.2 +virtualenv==20.24.3 wcwidth==0.2.6 webcolors==1.13 webencodings==0.5.1 websocket-client==1.6.1 werkzeug==2.2.3 -wheel==0.41.1 +wheel==0.41.2 widgetsnbextension==4.0.8 wrapt==1.15.0 y-py==0.5.9 diff --git a/.constraints/py3.8.txt b/.constraints/py3.8.txt index dbf4f675..97c3e69d 100644 --- a/.constraints/py3.8.txt +++ b/.constraints/py3.8.txt @@ -9,7 +9,7 @@ accessible-pygments==0.0.4 alabaster==0.7.13 ampform==0.14.6 anyio==3.7.1 -argon2-cffi==21.3.0 +argon2-cffi==23.1.0 argon2-cffi-bindings==21.2.0 arrow==1.2.3 asttokens==2.2.1 @@ -24,30 +24,30 @@ bleach==6.0.0 cachetools==5.3.1 certifi==2023.7.22 cffi==1.15.1 -cfgv==3.3.1 +cfgv==3.4.0 chardet==5.2.0 charset-normalizer==3.2.0 -click==8.1.6 +click==8.1.7 cloudpickle==2.2.1 colorama==0.4.6 comm==0.1.4 contourpy==1.1.0 -coverage==7.2.7 +coverage==7.3.0 cycler==0.11.0 -debugpy==1.6.7 +debugpy==1.6.7.post1 decorator==5.1.1 defusedxml==0.7.1 deprecated==1.2.14 distlib==0.3.7 dm-tree==0.1.8 docutils==0.19 -exceptiongroup==1.1.2 +exceptiongroup==1.1.3 execnet==2.0.2 executing==1.2.0 fastjsonschema==2.18.0 filelock==3.12.2 flatbuffers==23.5.26 -fonttools==4.42.0 +fonttools==4.42.1 fqdn==1.5.1 gast==0.4.0 google-auth==2.22.0 @@ -55,13 +55,13 @@ google-auth-oauthlib==1.0.0 google-pasta==0.2.0 graphviz==0.20.1 greenlet==2.0.2 -grpcio==1.56.2 +grpcio==1.57.0 h5py==3.9.0 hepunits==2.3.2 -identify==2.5.26 +identify==2.5.27 idna==3.4 imagesize==1.4.1 -iminuit==2.23.0 +iminuit==2.24.0 importlib-metadata==6.8.0 importlib-resources==6.0.1 iniconfig==2.0.0 @@ -86,16 +86,16 @@ jupyter-console==6.6.3 jupyter-core==5.3.1 jupyter-events==0.7.0 jupyter-lsp==2.2.0 -jupyter-server==2.7.0 +jupyter-server==2.7.2 jupyter-server-terminals==0.4.4 -jupyterlab==4.0.4 +jupyterlab==4.0.5 jupyterlab-code-formatter==2.2.1 jupyterlab-myst==2.0.1 jupyterlab-pygments==0.2.2 jupyterlab-server==2.24.0 jupyterlab-widgets==3.0.8 keras==2.13.1 -kiwisolver==1.4.4 +kiwisolver==1.4.5 libclang==16.0.6 livereload==2.6.3 llvmlite==0.40.1 @@ -109,14 +109,14 @@ mdurl==0.1.2 mistune==3.0.1 ml-dtypes==0.2.0 mpmath==1.3.0 -mypy==1.4.1 +mypy==1.5.1 mypy-extensions==1.0.0 myst-nb==0.17.2 myst-parser==0.18.1 nbclient==0.6.8 -nbconvert==7.7.3 +nbconvert==7.7.4 nbformat==5.9.2 -nbmake==1.4.1 +nbmake==1.4.3 nest-asyncio==1.5.7 nodeenv==1.8.0 notebook==7.0.2 @@ -142,7 +142,7 @@ pluggy==1.2.0 pre-commit==3.3.3 prometheus-client==0.17.1 prompt-toolkit==3.0.39 -protobuf==4.23.4 +protobuf==4.24.1 psutil==5.9.5 ptyprocess==0.7.0 pure-eval==0.2.2 @@ -150,11 +150,10 @@ py-cpuinfo==9.0.0 pyasn1==0.5.0 pyasn1-modules==0.3.0 pycparser==2.21 -pydantic==1.10.12 pydata-sphinx-theme==0.13.3 pygments==2.16.1 pyparsing==3.0.9 -pyproject-api==1.5.3 +pyproject-api==1.5.4 pytest==7.4.0 pytest-benchmark==4.0.0 pytest-cov==4.1.0 @@ -165,7 +164,7 @@ python-dateutil==2.8.2 python-json-logger==2.0.7 pytz==2023.3 pyyaml==6.0.1 -pyzmq==25.1.0 +pyzmq==25.1.1 qrules==0.9.8 qtconsole==5.4.3 qtpy==2.3.1 @@ -176,7 +175,7 @@ rfc3339-validator==0.1.4 rfc3986-validator==0.1.1 rpds-py==0.9.2 rsa==4.9 -ruff==0.0.282 +ruff==0.0.285 scipy==1.10.1 send2trash==1.8.2 six==1.16.0 @@ -199,7 +198,7 @@ sphinxcontrib-jsmath==1.0.1 sphinxcontrib-qthelp==1.0.3 sphinxcontrib-serializinghtml==1.1.5 sphobjinv==2.3.1 -sqlalchemy==2.0.19 +sqlalchemy==2.0.20 stack-data==0.6.2 sympy==1.12 tabulate==0.9.0 @@ -213,27 +212,27 @@ termcolor==2.3.0 terminado==0.17.1 tinycss2==1.2.1 tomli==2.0.1 -tornado==6.3.2 -tox==4.6.4 -tqdm==4.65.0 +tornado==6.3.3 +tox==4.10.0 +tqdm==4.66.1 traitlets==5.9.0 -types-docutils==0.20.0.1 +types-docutils==0.20.0.3 types-pkg-resources==0.1.3 types-pyyaml==6.0.12.11 types-requests==2.31.0.2 -types-setuptools==68.0.0.3 +types-setuptools==68.1.0.0 types-urllib3==1.26.25.14 typing-extensions==4.5.0 tzdata==2023.3 uri-template==1.3.0 urllib3==1.26.16 -virtualenv==20.24.2 +virtualenv==20.24.3 wcwidth==0.2.6 webcolors==1.13 webencodings==0.5.1 -websocket-client==1.6.1 -werkzeug==2.3.6 -wheel==0.41.1 +websocket-client==1.6.2 +werkzeug==2.3.7 +wheel==0.41.2 widgetsnbextension==4.0.8 wrapt==1.15.0 zipp==3.16.2 diff --git a/.constraints/py3.9.txt b/.constraints/py3.9.txt index 974fa776..9cbc4464 100644 --- a/.constraints/py3.9.txt +++ b/.constraints/py3.9.txt @@ -9,7 +9,7 @@ accessible-pygments==0.0.4 alabaster==0.7.13 ampform==0.14.6 anyio==3.7.1 -argon2-cffi==21.3.0 +argon2-cffi==23.1.0 argon2-cffi-bindings==21.2.0 arrow==1.2.3 asttokens==2.2.1 @@ -24,30 +24,30 @@ bleach==6.0.0 cachetools==5.3.1 certifi==2023.7.22 cffi==1.15.1 -cfgv==3.3.1 +cfgv==3.4.0 chardet==5.2.0 charset-normalizer==3.2.0 -click==8.1.6 +click==8.1.7 cloudpickle==2.2.1 colorama==0.4.6 comm==0.1.4 contourpy==1.1.0 -coverage==7.2.7 +coverage==7.3.0 cycler==0.11.0 -debugpy==1.6.7 +debugpy==1.6.7.post1 decorator==5.1.1 defusedxml==0.7.1 deprecated==1.2.14 distlib==0.3.7 dm-tree==0.1.8 docutils==0.19 -exceptiongroup==1.1.2 +exceptiongroup==1.1.3 execnet==2.0.2 executing==1.2.0 fastjsonschema==2.18.0 filelock==3.12.2 flatbuffers==23.5.26 -fonttools==4.42.0 +fonttools==4.42.1 fqdn==1.5.1 gast==0.4.0 google-auth==2.22.0 @@ -55,13 +55,13 @@ google-auth-oauthlib==1.0.0 google-pasta==0.2.0 graphviz==0.20.1 greenlet==2.0.2 -grpcio==1.56.2 +grpcio==1.57.0 h5py==3.9.0 hepunits==2.3.2 -identify==2.5.26 +identify==2.5.27 idna==3.4 imagesize==1.4.1 -iminuit==2.23.0 +iminuit==2.24.0 importlib-metadata==6.8.0 importlib-resources==6.0.1 iniconfig==2.0.0 @@ -86,16 +86,16 @@ jupyter-console==6.6.3 jupyter-core==5.3.1 jupyter-events==0.7.0 jupyter-lsp==2.2.0 -jupyter-server==2.7.0 +jupyter-server==2.7.2 jupyter-server-terminals==0.4.4 -jupyterlab==4.0.4 +jupyterlab==4.0.5 jupyterlab-code-formatter==2.2.1 jupyterlab-myst==2.0.1 jupyterlab-pygments==0.2.2 jupyterlab-server==2.24.0 jupyterlab-widgets==3.0.8 keras==2.13.1 -kiwisolver==1.4.4 +kiwisolver==1.4.5 libclang==16.0.6 livereload==2.6.3 llvmlite==0.40.1 @@ -109,14 +109,14 @@ mdurl==0.1.2 mistune==3.0.1 ml-dtypes==0.2.0 mpmath==1.3.0 -mypy==1.4.1 +mypy==1.5.1 mypy-extensions==1.0.0 myst-nb==0.17.2 myst-parser==0.18.1 nbclient==0.6.8 -nbconvert==7.7.3 +nbconvert==7.7.4 nbformat==5.9.2 -nbmake==1.4.1 +nbmake==1.4.3 nest-asyncio==1.5.7 nodeenv==1.8.0 notebook==7.0.2 @@ -141,7 +141,7 @@ pluggy==1.2.0 pre-commit==3.3.3 prometheus-client==0.17.1 prompt-toolkit==3.0.39 -protobuf==4.23.4 +protobuf==4.24.1 psutil==5.9.5 ptyprocess==0.7.0 pure-eval==0.2.2 @@ -149,11 +149,10 @@ py-cpuinfo==9.0.0 pyasn1==0.5.0 pyasn1-modules==0.3.0 pycparser==2.21 -pydantic==1.10.12 pydata-sphinx-theme==0.13.3 pygments==2.16.1 pyparsing==3.0.9 -pyproject-api==1.5.3 +pyproject-api==1.5.4 pytest==7.4.0 pytest-benchmark==4.0.0 pytest-cov==4.1.0 @@ -164,7 +163,7 @@ python-dateutil==2.8.2 python-json-logger==2.0.7 pytz==2023.3 pyyaml==6.0.1 -pyzmq==25.1.0 +pyzmq==25.1.1 qrules==0.9.8 qtconsole==5.4.3 qtpy==2.3.1 @@ -175,8 +174,8 @@ rfc3339-validator==0.1.4 rfc3986-validator==0.1.1 rpds-py==0.9.2 rsa==4.9 -ruff==0.0.282 -scipy==1.11.1 +ruff==0.0.285 +scipy==1.11.2 send2trash==1.8.2 six==1.16.0 sniffio==1.3.0 @@ -191,14 +190,14 @@ sphinx-copybutton==0.5.2 sphinx-design==0.5.0 sphinx-thebe==0.2.1 sphinx-togglebutton==0.3.2 -sphinxcontrib-applehelp==1.0.4 -sphinxcontrib-devhelp==1.0.2 -sphinxcontrib-htmlhelp==2.0.1 +sphinxcontrib-applehelp==1.0.7 +sphinxcontrib-devhelp==1.0.5 +sphinxcontrib-htmlhelp==2.0.4 sphinxcontrib-jsmath==1.0.1 -sphinxcontrib-qthelp==1.0.3 -sphinxcontrib-serializinghtml==1.1.5 +sphinxcontrib-qthelp==1.0.6 +sphinxcontrib-serializinghtml==1.1.9 sphobjinv==2.3.1 -sqlalchemy==2.0.19 +sqlalchemy==2.0.20 stack-data==0.6.2 sympy==1.12 tabulate==0.9.0 @@ -212,27 +211,27 @@ termcolor==2.3.0 terminado==0.17.1 tinycss2==1.2.1 tomli==2.0.1 -tornado==6.3.2 -tox==4.6.4 -tqdm==4.65.0 +tornado==6.3.3 +tox==4.10.0 +tqdm==4.66.1 traitlets==5.9.0 -types-docutils==0.20.0.1 +types-docutils==0.20.0.3 types-pkg-resources==0.1.3 types-pyyaml==6.0.12.11 types-requests==2.31.0.2 -types-setuptools==68.0.0.3 +types-setuptools==68.1.0.0 types-urllib3==1.26.25.14 typing-extensions==4.5.0 tzdata==2023.3 uri-template==1.3.0 urllib3==1.26.16 -virtualenv==20.24.2 +virtualenv==20.24.3 wcwidth==0.2.6 webcolors==1.13 webencodings==0.5.1 -websocket-client==1.6.1 -werkzeug==2.3.6 -wheel==0.41.1 +websocket-client==1.6.2 +werkzeug==2.3.7 +wheel==0.41.2 widgetsnbextension==4.0.8 wrapt==1.15.0 zipp==3.16.2 diff --git a/.cspell.json b/.cspell.json index 7ee889ff..30c2e951 100644 --- a/.cspell.json +++ b/.cspell.json @@ -32,7 +32,7 @@ ".readthedocs.yml", ".vscode/*", ".vscode/.gitignore", - ".zenodo.json", + "CITATION.cff", "codecov.yml", "Dockerfile", "docs/_templates/*", diff --git a/.gitpod.yml b/.gitpod.yml index 153517d2..360aad03 100644 --- a/.gitpod.yml +++ b/.gitpod.yml @@ -23,6 +23,7 @@ vscode: - garaioag.garaio-vscode-unwanted-recommendations - github.vscode-github-actions - github.vscode-pull-request-github + - ms-python.black-formatter - ms-python.mypy-type-checker - ms-python.python - ms-python.vscode-pylance diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index fb81181d..c1ac88fa 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -2,6 +2,7 @@ ci: autoupdate_commit_msg: "MAINT: update pip constraints and pre-commit" autoupdate_schedule: quarterly # already done by requirements-cron.yml skip: + - check-jsonschema - mypy - pyright - taplo @@ -40,7 +41,7 @@ repos: - id: trailing-whitespace - repo: https://github.com/ComPWA/repo-maintenance - rev: 0.0.193 + rev: 0.0.197 hooks: - id: check-dev-files args: @@ -76,12 +77,25 @@ repos: - id: black - repo: https://github.com/asottile/blacken-docs - rev: 1.15.0 + rev: 1.16.0 hooks: - id: blacken-docs + - repo: https://github.com/python-jsonschema/check-jsonschema + rev: 0.24.1 + hooks: + - id: check-jsonschema + name: Check CITATION.cff + args: + - --default-filetype + - yaml + - --schemafile + - https://citation-file-format.github.io/1.2.0/schema.json + - CITATION.cff + pass_filenames: false + - repo: https://github.com/streetsidesoftware/cspell-cli - rev: v6.31.1 + rev: v7.0.1 hooks: - id: cspell @@ -136,12 +150,12 @@ repos: metadata.vscode - repo: https://github.com/pre-commit/mirrors-prettier - rev: v3.0.1 + rev: v3.0.2 hooks: - id: prettier - repo: https://github.com/ComPWA/mirrors-pyright - rev: v1.1.320 + rev: v1.1.324 hooks: - id: pyright @@ -153,7 +167,7 @@ repos: - --py37-plus - repo: https://github.com/astral-sh/ruff-pre-commit - rev: v0.0.282 + rev: v0.0.285 hooks: - id: ruff args: diff --git a/.vscode/extensions.json b/.vscode/extensions.json index 85a15a7b..0380e17e 100644 --- a/.vscode/extensions.json +++ b/.vscode/extensions.json @@ -10,6 +10,7 @@ "garaioag.garaio-vscode-unwanted-recommendations", "github.vscode-github-actions", "github.vscode-pull-request-github", + "ms-python.black-formatter", "ms-python.mypy-type-checker", "ms-python.python", "ms-python.vscode-pylance", diff --git a/.vscode/settings.json b/.vscode/settings.json index f5c4f196..2f11cfcb 100644 --- a/.vscode/settings.json +++ b/.vscode/settings.json @@ -18,11 +18,13 @@ "[python]": { "editor.codeActionsOnSave": { "source.organizeImports": true - } + }, + "editor.defaultFormatter": "ms-python.black-formatter" }, "[yaml]": { "editor.defaultFormatter": "esbenp.prettier-vscode" }, + "black-formatter.importStrategy": "fromEnvironment", "coverage-gutters.coverageFileNames": ["coverage.xml"], "coverage-gutters.coverageReportFileName": "**/htmlcov/index.html", "coverage-gutters.showGutterCoverage": false, @@ -67,6 +69,7 @@ "tests/**/__init__.py": true }, "yaml.schemas": { + "https://citation-file-format.github.io/1.2.0/schema.json": "CITATION.cff", "https://json.schemastore.org/github-workflow.json": "./.github/workflows/requirements.yml" } } diff --git a/.zenodo.json b/.zenodo.json deleted file mode 100644 index b8ed9f83..00000000 --- a/.zenodo.json +++ /dev/null @@ -1,62 +0,0 @@ -{ - "access_right": "open", - "creators": [ - { - "affiliation": "Ruhr University Bochum", - "name": "Fritsch, Miriam" - }, - { - "affiliation": "Ruhr University Bochum", - "name": "Pfl\u00fcger, Stefan" - }, - { - "affiliation": "Ruhr University Bochum", - "name": "de Boer, Remco" - }, - { - "affiliation": "Johannes Gutenberg University Mainz", - "name": "Gradl, Wolfgang" - }, - { - "affiliation": "GSI Helmholtzzentrum f\u00fcr Schwerionenforschung", - "name": "Peters, Klaus" - } - ], - "description": "

TensorWaves is a fitter package that optimizes mathematical models to data samples. The models can be any symbolic mathematical expression that is then converted to any computational backend. In addition, TensorWaves provides functionality to generate toy Monte Carlo data samples. The package is developed in parallel with AmpForm, which implements physics models, but its 'lambdifying' mechanisms can in principle be used independently.

", - "keywords": [ - "partial wave analysis", - "amplitude analysis", - "computer algebra system", - "optimizer", - "minimizer", - "tensorflow", - "jax", - "numpy" - ], - "language": "eng", - "license": "GPL-3.0-or-later", - "references": [ - "Navarro et al. (2019). \"phasespace: n-body phase space generation in Python\". https://doi.org/10.21105/joss.01570.", - "Pfl\u00fcger, de Boer et al. (2021). \"ComPWA/qrules: Rule-based particle reaction problem solver on a quantum number level\". https://doi.org/10.5281/zenodo.5526360.", - "Pfl\u00fcger, de Boer et al. (2021). \"ComPWA/ampform: Automatically generate symbolic amplitude models for Partial Wave Analysis\". https://doi.org/10.5281/zenodo.5526648." - ], - "related_identifiers": [ - { - "scheme": "doi", - "identifier": "10.5281/zenodo.5526650", - "relation": "continues" - }, - { - "scheme": "doi", - "identifier": "10.5281/zenodo.5526360", - "relation": "references" - }, - { - "scheme": "doi", - "identifier": "10.5281/zenodo.5526648", - "relation": "references" - } - ], - "title": "ComPWA/tensorwaves: Python fitter package for multiple computational back-ends", - "upload_type": "software" -} diff --git a/CITATION.cff b/CITATION.cff new file mode 100644 index 00000000..b9744a3c --- /dev/null +++ b/CITATION.cff @@ -0,0 +1,37 @@ +cff-version: 1.2.0 +message: If you use this software, please cite it as below. +title: >- + ComPWA/tensorwaves: Python fitter package for multiple computational back-ends +abstract: |- + TensorWaves is a fitter package that optimizes mathematical models to data samples. The models can be any _symbolic_ mathematical expression that is then converted to any computational backend. In addition, TensorWaves provides functionality to generate toy Monte Carlo data samples. The package is developed in parallel with [AmpForm](https://github.com/ComPWA/ampform), which implements physics models, but its 'lambdifying' mechanisms can in principle be used independently. + +authors: + - family-names: Fritsch + given-names: Miriam + affiliation: Ruhr University Bochum + - family-names: Pflüger + given-names: Stefan + affiliation: Ruhr University Bochum + - family-names: de Boer + given-names: Remco E. + affiliation: Ruhr University Bochum + - family-names: Gradl + given-names: Wolfgang + affiliation: Johannes Gutenberg University Mainz + - family-names: Peters + given-names: Klaus + affiliation: GSI Helmholtzzentrum für Schwerionenforschung +doi: 10.5281/zenodo.5526650 +keywords: + - partial wave analysis + - amplitude analysis + - computer algebra system + - optimizer + - minimizer + - tensorflow + - jax + - numpy +license: GPL-3.0-or-later +repository-code: https://github.com/ComPWA/tensorwaves +type: software +url: https://tensorwaves.readthedocs.io