.travis.yml

language: python
sudo: true
cache: pip
dist: xenial
python:
  - '3.7'
install:
  - pip install tox codecov
script:
  - travis_wait tox
after_success:
  - tox -e coverage-report

# TODO move all tests into tests/ and then they will get run together.
#install:
#  - pip install -r requirements.txt
#  - pip install pytest==5.2.0
#  - python -m spacy download en_core_web_sm
# TODO write code that downloads resources on its own!
#  - wget -O src/relation_extraction_model/transformer_dir/tf_model.h5 https://storage.googleapis.com/coronaviruspublicdata/re_final_best/new/tf_model.h5
#  - wget -O src/relation_extraction_model/transformer_dir/weight.pickle https://storage.googleapis.com/coronaviruspublicdata/re_final_best/new/sigmoid.pickle

# commands to run tests
#script:
#  - python -m pytest utils
#  - python src/relation_extraction_model/model_tests.py
#  - python -m pytest covid_mechanism_kg
#  - python -m pytest drug_treatment_extraction
#  - python -m pytest main_pipeline
#  - python -m pytest model_organism_extraction
#  - python -m pytest paper_evidence_annot