NAMESPACE

# Generated by roxygen2: do not edit by hand

export(add_entry_to_CTR_dataframe)
export(add_entry_to_Regulon_dataframe)
export(add_node_type)
export(calculate_r_effectsize)
export(combine_LR_and_TF)
export(combine_LR_and_TF_unfiltered)
export(condition_comparison_significant)
export(convert_seurat_to_anndata)
export(create_empty_CTR_dataframe)
export(create_empty_Regulon_dataframe)
export(decoupleR_viper_analysis)
export(dorothea_base_execution)
export(dorothea_tf_prediction)
export(generate_CrossTalkeR_input)
export(generate_CrossTalkeR_input_mouse)
export(generate_intracellular_network)
export(get_significant_tfs)
export(get_significant_tfs_single)
export(load_dorothea_regulon)
export(plot_condition_Heatmaps)
export(plot_condition_tf_activities)
export(plot_condition_tf_activities_compressed)
export(plot_highly_variable_tfs)
export(plot_highly_variable_tfs_condition)
export(plot_tf_activity)
export(plot_tf_activity_compressed)
export(run_py_decoupler_mlm)
export(run_py_decoupler_ulm)
export(run_py_decoupler_viper)
export(run_py_decoupler_wmean)
export(run_py_liana)
export(save_unfiltered_tf_scores)
export(save_variable_tf_scores)
export(tf_activity_analysis)
export(translate_to_human)
export(translate_to_human_ligands)
export(translate_to_human_old)
export(translate_to_mouse)
export(translate_to_mouse_ligands)
export(unfiltered_tf_activity_table)
export(unique_condition_specific_tfs)
export(validate_input_arguments)
import(ComplexHeatmap)
import(OmnipathR)
import(dorothea)
import(dplyr)
import(ggplot2)
import(glue)
import(grid)
import(maditr)
import(pheatmap)
import(qpdf)
import(sceasy)
import(stringr)
import(tibble)
import(tidyr)