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test
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#!/usr/bin/env bash
DIR="$( cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd )"
$DIR/src/kinfin.py -g $DIR/example/OrthologousGroups.txt -c $DIR/example/config.txt -s $DIR/example/SequenceIDs.txt -t $DIR/example/tree.nwk -o $DIR/example/test -p $DIR/example/SpeciesIDs.txt -a $DIR/example/fasta/ -f $DIR/example/functional_annotation.txt --min_proteomes 2
#$DIR/src/kinfin.py -g $DIR/example/OrthologousGroups.txt -c $DIR/example/config.txt -s $DIR/example/SequenceIDs.txt -t $DIR/example/tree.nwk -o $DIR/example/test -p $DIR/example/SpeciesIDs.txt -a $DIR/example/fasta/ -f $DIR/example/functional_annotation.txt --min_proteomes 2 --test kruskal
#$DIR/src/kinfin.py -g $DIR/example/OrthologousGroups.txt -c $DIR/example/config.txt -s $DIR/example/SequenceIDs.txt -t $DIR/example/tree.nwk -o $DIR/example/test -p $DIR/example/SpeciesIDs.txt -a $DIR/example/fasta/ -f $DIR/example/functional_annotation.txt --min_proteomes 2 --test ks