DESCRIPTION

Package: DO.utils
Type: Package
Title: Public Resource Utilities Designed by/for the Disease Ontology
Version: 0.3.2
Author: J. Allen Baron
Maintainer: J. Allen Baron <allenbaron@som.umaryland.edu>
Description: Generally useful tools to assess use of public resources in
    scientific literature ("cited by", search, etc.) and to simplify common R
    tasks, along with tools specifically designed for analysis and
    improvement of the Human Disease Ontology (DO; https://disease-ontology.org).
License: CC0
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.3.1
Roxygen: list(markdown = TRUE)
Imports:
    assertthat,
    dplyr (>= 1.1.0),
    ggplot2,
    glue,
    googlesheets4,
    httr,
    igraph,
    jsonlite,
    lubridate,
    magrittr,
    methods,
    purrr,
    rcrossref,
    readr,
    rentrez,
    reticulate (>= 1.28),
    rlang,
    rscopus,
    stats,
    stringdist,
    stringr (>= 1.5.0),
    tibble,
    tidyr,
    tidyselect,
    utils
Suggests:
    rmarkdown,
    knitr,
    testthat (>= 3.2.0),
    covr,
    devtools,
    tidygraph,
    waldo,
    keyring,
    withr,
    yaml
Config/testthat/edition: 3
Config/reticulate:
    list(
        packages = list(
            list(package = "pandas", pip = TRUE),
            list(package = "pyDOID", pip = TRUE),
            list(package = "rdflib", pip = TRUE),
            list(package = "GitPython", pip = TRUE),
            list(package = "pyobo", pip = TRUE),
            list(package = "indra", pip = TRUE),
            list(package = "gilda", pip = TRUE)
        )
    )
Depends:
    R (>= 3.5.0)
Remotes: allenbaron/rentrez
VignetteBuilder: knitr
URL: https://diseaseontology.github.io/DO.utils/