LAMMPS: Add 2Aug2023_update4 to zen4 hook #652
Workflow file for this run
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| # documentation: https://help.github.com/en/articles/workflow-syntax-for-github-actions | |
| name: Tests for eessi_module_functionality in software.eessi.io | |
| on: | |
| push: | |
| branches: [ "*-software.eessi.io" ] | |
| pull_request: | |
| permissions: | |
| contents: read # to fetch code (actions/checkout) | |
| jobs: | |
| basic_checks: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| EESSI_VERSION: | |
| - 2023.06 | |
| steps: | |
| - name: Check out software-layer repository | |
| uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # v4.1.1 | |
| - name: Mount EESSI CernVM-FS pilot repository | |
| uses: cvmfs-contrib/github-action-cvmfs@55899ca74cf78ab874bdf47f5a804e47c198743c # v4.0 | |
| with: | |
| cvmfs_config_package: https://github.com/EESSI/filesystem-layer/releases/download/latest/cvmfs-config-eessi_latest_all.deb | |
| cvmfs_http_proxy: DIRECT | |
| cvmfs_repositories: software.eessi.io | |
| - name: Test for making sure spider cache is being used and not being rebuilt | |
| run: | | |
| . /cvmfs/software.eessi.io/versions/${{matrix.EESSI_VERSION}}/compat/linux/$(uname -m)/usr/share/Lmod/init/bash # Initialise Lmod | |
| export MODULEPATH=init/modules | |
| configfile="configfile.txt" | |
| module -T load EESSI/${{matrix.EESSI_VERSION}} | |
| module --config > "${configfile}" 2>&1 | |
| grep cache "${configfile}" | grep software | grep -v compat | |
| if timeout 10s bash -c "LMOD_PAGER=none module --terse avail" && grep cache "${configfile}" | grep software | grep -v compat; then | |
| echo "EESSI spider cache is being used" | |
| else | |
| echo "EESSI spider cache is being rebuilt" >&2 | |
| exit 1 | |
| fi | |
| env | grep LMOD | |
| module purge | |
| unset MODULEPATH | |
| - name: Test for archdetect_cpu functionality with invalid path | |
| run: | | |
| # Initialise Lmod | |
| . /cvmfs/software.eessi.io/versions/${{matrix.EESSI_VERSION}}/compat/linux/$(uname -m)/usr/share/Lmod/init/bash | |
| export MODULEPATH=init/modules | |
| set +e # Do not exit immediately if a command exits with a non-zero status | |
| export EESSI_ARCHDETECT_OPTIONS_OVERRIDE="dummy/cpu" | |
| outfile="outfile.txt" | |
| module load EESSI/${{matrix.EESSI_VERSION}} > "${outfile}" 2>&1 | |
| cat "${outfile}" | |
| if grep -q "Software directory check" "${outfile}"; then | |
| echo "Test for picking up invalid path on \${archdetect_cpu} PASSED" | |
| else | |
| echo "Test for picking up invalid path on \${archdetect_cpu} FAILED" >&2 | |
| exit 1 | |
| fi | |
| unset EESSI_ARCHDETECT_OPTIONS_OVERRIDE | |
| set -e # Re-enable exit on non-zero status | |
| lmod_and_init_script_comparison: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| EESSI_VERSION: | |
| - 2023.06 | |
| EESSI_SOFTWARE_SUBDIR_OVERRIDE: | |
| - x86_64/amd/zen3 | |
| - x86_64/amd/zen4 | |
| EESSI_ACCELERATOR_TARGET_OVERRIDE: | |
| - accel/nvidia/cc80 | |
| steps: | |
| - name: Check out software-layer repository | |
| uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # v4.1.1 | |
| - name: Mount EESSI CernVM-FS pilot repository | |
| uses: cvmfs-contrib/github-action-cvmfs@55899ca74cf78ab874bdf47f5a804e47c198743c # v4.0 | |
| with: | |
| cvmfs_config_package: https://github.com/EESSI/filesystem-layer/releases/download/latest/cvmfs-config-eessi_latest_all.deb | |
| cvmfs_http_proxy: DIRECT | |
| cvmfs_repositories: software.eessi.io | |
| - name: Test for expected variables match between Lmod init script and original bash script | |
| run: | | |
| # Initialise Lmod | |
| . /cvmfs/software.eessi.io/versions/${{matrix.EESSI_VERSION}}/compat/linux/$(uname -m)/usr/share/Lmod/init/bash | |
| # Set our path overrides according to our matrix | |
| export EESSI_SOFTWARE_SUBDIR_OVERRIDE=${{matrix.EESSI_SOFTWARE_SUBDIR_OVERRIDE}} | |
| export EESSI_ACCELERATOR_TARGET_OVERRIDE=${{matrix.EESSI_ACCELERATOR_TARGET_OVERRIDE}} | |
| moduleoutfile="moduleout.txt" | |
| sourceoutfile="sourceout.txt" | |
| # First do (and undo) the Lmod initialisation | |
| export MODULEPATH=init/modules | |
| # Turn on debug output in case we want to take a look | |
| export EESSI_DEBUG_INIT=true | |
| CPU_ARCH=$(./init/eessi_archdetect.sh -a cpupath) | |
| export EESSI_ARCHDETECT_OPTIONS_OVERRIDE="dummy/cpu:${CPU_ARCH}:dummy1/cpu1" | |
| module load EESSI/${{matrix.EESSI_VERSION}} | |
| # EESSI_ARCHDETECT_OPTIONS_OVERRIDE/EESSI_DEBUG_INIT only relevant for Lmod init | |
| unset EESSI_ARCHDETECT_OPTIONS_OVERRIDE | |
| unset EESSI_DEBUG_INIT | |
| # Store all relevant environment variables | |
| env | grep -E '(^EESSI_|^LMOD_RC|^LMOD_PACKAGE_PATH)' | sort > "${moduleoutfile}" | |
| module unload EESSI/${{matrix.EESSI_VERSION}} | |
| # Now do the init script initialisation | |
| source ./init/bash | |
| # source script version sets environment variables to force archdetect, ignore these | |
| unset EESSI_USE_ARCHSPEC | |
| unset EESSI_USE_ARCHDETECT | |
| env | grep -E '(^EESSI_|^LMOD_RC|^LMOD_PACKAGE_PATH)' | sort > "${sourceoutfile}" | |
| # Now compare the two results | |
| echo "" | |
| echo "Lmod initialisation:" | |
| cat "${moduleoutfile}" | |
| echo "" | |
| echo "Source script initialisation:" | |
| cat "${sourceoutfile}" | |
| echo "" | |
| echo "" | |
| if (diff "${moduleoutfile}" "${sourceoutfile}" > /dev/null); then | |
| echo "Test for checking env variables PASSED" | |
| else | |
| echo "Test for checking env variables FAILED" >&2 | |
| diff --unified=0 "${moduleoutfile}" "${sourceoutfile}" | |
| exit 1 | |
| fi | |
| make_sure_load_and_unload_work: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| EESSI_VERSION: | |
| - 2023.06 | |
| EESSI_SOFTWARE_SUBDIR_OVERRIDE: | |
| - none | |
| - x86_64/amd/zen2 | |
| - x86_64/amd/zen4 | |
| EESSI_ACCELERATOR_TARGET_OVERRIDE: | |
| - none | |
| - accel/nvidia/cc80 | |
| steps: | |
| - name: Check out software-layer repository | |
| uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # v4.1.1 | |
| - name: Mount EESSI CernVM-FS pilot repository | |
| uses: cvmfs-contrib/github-action-cvmfs@55899ca74cf78ab874bdf47f5a804e47c198743c # v4.0 | |
| with: | |
| cvmfs_config_package: https://github.com/EESSI/filesystem-layer/releases/download/latest/cvmfs-config-eessi_latest_all.deb | |
| cvmfs_http_proxy: DIRECT | |
| cvmfs_repositories: software.eessi.io | |
| - name: Test for identical environment after loading and unloading the EESSI module | |
| run: | | |
| # Initialise Lmod | |
| . /cvmfs/software.eessi.io/versions/${{matrix.EESSI_VERSION}}/compat/linux/$(uname -m)/usr/share/Lmod/init/bash | |
| # Set our cpu path overrides according to our matrix | |
| if [[ "${{matrix.EESSI_SOFTWARE_SUBDIR_OVERRIDE}}" != "none" ]]; then | |
| export EESSI_SOFTWARE_SUBDIR_OVERRIDE=${{matrix.EESSI_SOFTWARE_SUBDIR_OVERRIDE}} | |
| fi | |
| # Set our accelerator path overrides according to our matrix | |
| if [[ "${{matrix.EESSI_ACCELERATOR_TARGET_OVERRIDE}}" != "none" ]]; then | |
| export EESSI_ACCELERATOR_TARGET_OVERRIDE=${{matrix.EESSI_ACCELERATOR_TARGET_OVERRIDE}} | |
| fi | |
| # Turn on debug output in case we want to take a look | |
| export EESSI_DEBUG_INIT=true | |
| initial_env_file="initial_env.txt" | |
| module_cycled_file="load_unload_cycle.txt" | |
| # prepare Lmod, resetting it in a roundabout given we don't want defaults set | |
| export MODULEPATH=init/modules:.github/workflows/modules | |
| module load fake_module | |
| module purge | |
| module unuse .github/workflows/modules | |
| module avail | |
| # Store the initial environment (ignoring Lmod tables) | |
| env | grep -v _ModuleTable | sort > "${initial_env_file}" | |
| # Do (and undo) loading the EESSI module | |
| CPU_ARCH=$(./init/eessi_archdetect.sh -a cpupath) | |
| module load EESSI/${{matrix.EESSI_VERSION}} | |
| module unload EESSI/${{matrix.EESSI_VERSION}} | |
| env | grep -v _ModuleTable | sort > "${module_cycled_file}" | |
| # Now compare the two results (do not expose the files, as they contain the full environment!) | |
| if (diff "${initial_env_file}" "${module_cycled_file}" > /dev/null); then | |
| echo "Test for checking env variables PASSED" | |
| else | |
| echo "Test for checking env variables FAILED" >&2 | |
| diff --unified=0 "${initial_env_file}" "${module_cycled_file}" | |
| exit 1 | |
| fi |