2024-05-10 18:00:04,003 UTC [2928843] INFO esmvalcore._main:492 ______________________________________________________________________ _____ ____ __ ____ __ _ _____ _ | ____/ ___|| \/ \ \ / /_ _| |_ _|__ ___ | | | _| \___ \| |\/| |\ \ / / _` | | | |/ _ \ / _ \| | | |___ ___) | | | | \ V / (_| | | | | (_) | (_) | | |_____|____/|_| |_| \_/ \__,_|_| |_|\___/ \___/|_| ______________________________________________________________________ ESMValTool - Earth System Model Evaluation Tool. http://www.esmvaltool.org CORE DEVELOPMENT TEAM AND CONTACTS: Birgit Hassler (Co-PI; DLR, Germany - birgit.hassler@dlr.de) Alistair Sellar (Co-PI; Met Office, UK - alistair.sellar@metoffice.gov.uk) Bouwe Andela (Netherlands eScience Center, The Netherlands - b.andela@esciencecenter.nl) Lee de Mora (PML, UK - ledm@pml.ac.uk) Niels Drost (Netherlands eScience Center, The Netherlands - n.drost@esciencecenter.nl) Veronika Eyring (DLR, Germany - veronika.eyring@dlr.de) Bettina Gier (UBremen, Germany - gier@uni-bremen.de) Remi Kazeroni (DLR, Germany - remi.kazeroni@dlr.de) Nikolay Koldunov (AWI, Germany - nikolay.koldunov@awi.de) Axel Lauer (DLR, Germany - axel.lauer@dlr.de) Saskia Loosveldt-Tomas (BSC, Spain - saskia.loosveldt@bsc.es) Ruth Lorenz (ETH Zurich, Switzerland - ruth.lorenz@env.ethz.ch) Benjamin Mueller (LMU, Germany - b.mueller@iggf.geo.uni-muenchen.de) Valeriu Predoi (URead, UK - valeriu.predoi@ncas.ac.uk) Mattia Righi (DLR, Germany - mattia.righi@dlr.de) Manuel Schlund (DLR, Germany - manuel.schlund@dlr.de) Breixo Solino Fernandez (DLR, Germany - breixo.solinofernandez@dlr.de) Javier Vegas-Regidor (BSC, Spain - javier.vegas@bsc.es) Klaus Zimmermann (SMHI, Sweden - klaus.zimmermann@smhi.se) For further help, please read the documentation at http://docs.esmvaltool.org. Have fun! 2024-05-10 18:00:04,003 UTC [2928843] INFO esmvalcore._main:493 Package versions 2024-05-10 18:00:04,003 UTC [2928843] INFO esmvalcore._main:494 ---------------- 2024-05-10 18:00:04,003 UTC [2928843] INFO esmvalcore._main:495 ESMValCore: 2.10.0 2024-05-10 18:00:04,003 UTC [2928843] INFO esmvalcore._main:498 ---------------- 2024-05-10 18:00:04,003 UTC [2928843] INFO esmvalcore._main:499 Using config file /fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/config-user.yml 2024-05-10 18:00:04,004 UTC [2928843] INFO esmvalcore._main:500 Writing program log files to: /fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/output/piControl__Zonal_test--time_ocean_zonal_mean_20240510_180003/run/main_log.txt /fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/output/piControl__Zonal_test--time_ocean_zonal_mean_20240510_180003/run/main_log_debug.txt 2024-05-10 18:00:17,276 UTC [2928843] INFO esmvalcore._main:91 Starting the Earth System Model Evaluation Tool at time: 2024-05-10 18:00:17 UTC 2024-05-10 18:00:17,277 UTC [2928843] INFO esmvalcore._main:95 ---------------------------------------------------------------------- 2024-05-10 18:00:17,277 UTC [2928843] INFO esmvalcore._main:96 RECIPE = /fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/recipes/piControl__Zonal_test--time_ocean_zonal_mean.yml 2024-05-10 18:00:17,277 UTC [2928843] INFO esmvalcore._main:97 RUNDIR = /fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/output/piControl__Zonal_test--time_ocean_zonal_mean_20240510_180003/run 2024-05-10 18:00:17,277 UTC [2928843] INFO esmvalcore._main:98 WORKDIR = /fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/output/piControl__Zonal_test--time_ocean_zonal_mean_20240510_180003/work 2024-05-10 18:00:17,277 UTC [2928843] INFO esmvalcore._main:99 PREPROCDIR = /fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/output/piControl__Zonal_test--time_ocean_zonal_mean_20240510_180003/preproc 2024-05-10 18:00:17,279 UTC [2928843] INFO esmvalcore._main:100 PLOTDIR = /fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/output/piControl__Zonal_test--time_ocean_zonal_mean_20240510_180003/plots 2024-05-10 18:00:17,279 UTC [2928843] INFO esmvalcore._main:101 ---------------------------------------------------------------------- 2024-05-10 18:00:17,279 UTC [2928843] INFO esmvalcore._main:104 Running tasks using at most 160 processes 2024-05-10 18:00:17,279 UTC [2928843] INFO esmvalcore._main:106 If your system hangs during execution, it may not have enough memory for keeping this number of tasks in memory. 2024-05-10 18:00:17,279 UTC [2928843] INFO esmvalcore._main:109 If you experience memory problems, try reducing 'max_parallel_tasks' in your user configuration file. 2024-05-10 18:00:17,281 UTC [2928843] WARNING esmvalcore.config._dask:18 Using the Dask basic scheduler. This may lead to slow computations and out-of-memory errors. Note that the basic scheduler may still be the best choice for preprocessor functions that are not lazy. In that case, you can safely ignore this warning. See https://docs.esmvaltool.org/projects/ESMValCore/en/latest/quickstart/configure.html#dask-distributed-configuration for more information. 2024-05-10 18:00:17,282 UTC [2928843] DEBUG esmvalcore._recipe.check:54 Checking recipe against schema /space/hall5/sitestore/eccc/crd/ccrn/users/rkw001/miniconda3/envs/a4d_env_EVTmain/lib/python3.11/site-packages/esmvalcore/_recipe/recipe_schema.yml 2024-05-10 18:00:17,298 UTC [2928843] DEBUG esmvalcore._recipe.to_datasets:343 Populating list of datasets for variable thetao in diagnostic time_ocean_zonal_mean 2024-05-10 18:00:17,299 UTC [2928843] DEBUG esmvalcore._recipe.to_datasets:367 Found Dataset: thetao, Omon, CMIP6, CanESM5-1, piControl, r1i1p2f1, gn 2024-05-10 18:00:17,299 UTC [2928843] DEBUG esmvalcore._recipe.recipe:781 Retrieving diagnostics from recipe 2024-05-10 18:00:17,299 UTC [2928843] INFO esmvalcore._recipe.recipe:999 Creating tasks from recipe 2024-05-10 18:00:17,299 UTC [2928843] INFO esmvalcore._recipe.recipe:1008 Creating tasks for diagnostic time_ocean_zonal_mean 2024-05-10 18:00:17,299 UTC [2928843] INFO esmvalcore._recipe.recipe:983 Creating preprocessor task time_ocean_zonal_mean/thetao 2024-05-10 18:00:17,299 UTC [2928843] INFO esmvalcore._recipe.recipe:653 Creating preprocessor 'time_ocean_zonal_mean' task for variable 'thetao' 2024-05-10 18:00:17,306 UTC [2928843] DEBUG esmvalcore.local:444 Looking for files matching: /space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/*/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn*.nc 2024-05-10 18:00:17,312 UTC [2928843] DEBUG esmvalcore._recipe.recipe:263 Using input files for variable thetao of dataset CanESM5-1: /space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_619101-620012.nc /space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_620101-621012.nc /space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_621101-622012.nc 2024-05-10 18:00:17,312 UTC [2928843] INFO esmvalcore._recipe.recipe:520 Found input files for Dataset: thetao, Omon, CMIP6, CanESM5-1, CMIP, piControl, r1i1p2f1, gn, v20190429 2024-05-10 18:00:17,313 UTC [2928843] INFO esmvalcore._recipe.recipe:677 PreprocessingTask time_ocean_zonal_mean/thetao created. 2024-05-10 18:00:17,313 UTC [2928843] DEBUG esmvalcore._recipe.recipe:678 PreprocessingTask time_ocean_zonal_mean/thetao will create the files: /fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/output/piControl__Zonal_test--time_ocean_zonal_mean_20240510_180003/preproc/time_ocean_zonal_mean/thetao/CMIP6_CanESM5-1_Omon_piControl_r1i1p2f1_thetao_6191-6220.nc 2024-05-10 18:00:17,313 UTC [2928843] INFO esmvalcore._recipe.recipe:1048 These tasks will be executed: time_ocean_zonal_mean/thetao 2024-05-10 18:00:17,313 UTC [2928843] DEBUG esmvalcore._main:128 Recipe summary: PreprocessingTask: time_ocean_zonal_mean/thetao order: ['climate_statistics', 'extract_levels', 'regrid', 'zonal_statistics', 'remove_supplementary_variables', 'save'] PreprocessorFile: /fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/output/piControl__Zonal_test--time_ocean_zonal_mean_20240510_180003/preproc/time_ocean_zonal_mean/thetao/CMIP6_CanESM5-1_Omon_piControl_r1i1p2f1_thetao_6191-6220.nc input files: [LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_619101-620012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_620101-621012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_621101-622012.nc')] settings: {'climate_statistics': {'operator': 'mean', 'period': 'full'}, 'extract_levels': {'coordinate': 'depth', 'levels': [0, 10, 20, 50, 100, 200, 300, 500, 750, 1000, 1250, 1500, 1750, 2000, 2250, 2500, 2750, 3000, 3250, 3500, 3750, 4000, 4250, 4500, 4750, 5000, 5250, 5500, 5750], 'scheme': 'linear_extrapolate'}, 'regrid': {'scheme': 'nearest', 'target_grid': '1x1'}, 'remove_supplementary_variables': {}, 'save': {'compress': False, 'filename': PosixPath('/fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/output/piControl__Zonal_test--time_ocean_zonal_mean_20240510_180003/preproc/time_ocean_zonal_mean/thetao/CMIP6_CanESM5-1_Omon_piControl_r1i1p2f1_thetao_6191-6220.nc')}, 'zonal_statistics': {'operator': 'mean'}} ancestors: None 2024-05-10 18:00:17,317 UTC [2928843] INFO esmvalcore._recipe.recipe:1111 Wrote recipe with version numbers and wildcards to: file:///fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/output/piControl__Zonal_test--time_ocean_zonal_mean_20240510_180003/run/piControl__Zonal_test--time_ocean_zonal_mean_filled.yml 2024-05-10 18:00:17,317 UTC [2928843] INFO esmvalcore.config._dask:70 Using the Dask basic scheduler. 2024-05-10 18:00:17,317 UTC [2928843] INFO esmvalcore._task:760 Running 1 tasks using 1 processes 2024-05-10 18:00:17,355 UTC [2991082] INFO esmvalcore._task:261 Starting task time_ocean_zonal_mean/thetao in process [2991082] 2024-05-10 18:00:17,432 UTC [2991082] DEBUG esmvalcore.preprocessor:651 Running block ['climate_statistics', 'extract_levels', 'regrid', 'zonal_statistics'] 2024-05-10 18:00:17,432 UTC [2991082] DEBUG esmvalcore.preprocessor:658 Applying single-model steps to PreprocessorFile: /fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/output/piControl__Zonal_test--time_ocean_zonal_mean_20240510_180003/preproc/time_ocean_zonal_mean/thetao/CMIP6_CanESM5-1_Omon_piControl_r1i1p2f1_thetao_6191-6220.nc 2024-05-10 18:00:17,433 UTC [2991082] DEBUG esmvalcore.esgf._download:535 All required data is available locally, not downloading anything. 2024-05-10 18:00:17,434 UTC [2991082] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_file 2024-05-10 18:00:17,435 UTC [2991082] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_file' on the data LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_619101-620012.nc') loaded from original input file(s) [LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_619101-620012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_620101-621012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_621101-622012.nc')] with function argument(s) output_dir = PosixPath('/fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/output/piControl__Zonal_test--time_ocean_zonal_mean_20240510_180003/preproc/fixed_files/thetao_Omon_CMIP6_CanESM5-1_CMIP_piControl_r1i1p2f1_gn_v20190429_'), add_unique_suffix = True, session = Session({'auxiliary_data_dir': PosixPath('/fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/../../config/config-developer.yml'), 'config_file': PosixPath('/fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/home/rkw001/climate_data'), 'drs': {'AMAP': 'default', 'AMAPcmam': 'default', 'CMIP5': 'CCCma', 'CMIP6': 'CCCma', 'CanESM5.1': 'default', 'CanESM5_dev': 'default', 'OBS': 'default', 'RAWOBS': 'default', 'ana4mips': 'default', 'default': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'debug', 'max_datasets': None, 'max_parallel_tasks': None, 'max_years': None, 'output_dir': PosixPath('/fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/output'), 'output_file_type': 'svg', 'profile_diagnostic': False, 'remove_preproc_dir': False, 'resume_from': [], 'rootpath': {'AMAP': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/legacy_tmp/AMAP')], 'AMAPcmam': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/users/mcr001/AMAPCMAM')], 'CMIP5': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/model_output/CMIP5/output')], 'CMIP6': [PosixPath('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6')], 'CanESM2': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/model_output/CMIP5/output/CCCma/CanESM2')], 'CanESM5.1': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/model_output/canesm-5.1'), PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/users/mcr001/tmp/CanESM5.1_subset')], 'CanESM5_dev': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/users'), PosixPath('/space/hall6/sitestore/eccc/crd/ccrn/users')], 'CanESM5_local': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/model_output/CMIP6/final/CMIP6')], 'DKRZ_OBS': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/obs/ESMValTool_obs')], 'NEMO4': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/users'), PosixPath('/space/hall6/sitestore/eccc/crd/ccrn/users')], 'OBS': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/obs/ESMValTool_obs')], 'OBS6': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/obs/ESMValTool_obs')], 'RAWOBS': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/obs/ESMValTool_obs/RAW')], 'ana4mips': [PosixPath('/space/hall6/sitestore/eccc/crd/ccrn/users/scrd113/CMOROBS')], 'ana4mips_v1': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/obs/ESMValTool_obs')], 'default': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/users/cmr203/ncconv/netcdfconv/final/CMIP6')], 'native6': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/obs/ESMValTool_obs')], 'obs4MIPs': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/obs/ESMValTool_obs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'never', 'skip_nonexistent': False, 'write_ncl_interface': False}), short_name = 'thetao', mip = 'Omon', preprocessor = 'time_ocean_zonal_mean', project = 'CMIP6', dataset = 'CanESM5-1', ensemble = 'r1i1p2f1', exp = 'piControl', grid = 'gn', institute = 'CCCma', timerange = '6191/6220', variable_group = 'thetao', diagnostic = 'time_ocean_zonal_mean', recipe_dataset_index = 0, alias = 'CanESM5-1', activity = 'CMIP', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'degC', modeling_realm = ['ocean'], frequency = 'mon', version = 'v20190429' 2024-05-10 18:00:17,437 UTC [2991082] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_file' on the data LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_620101-621012.nc') loaded from original input file(s) [LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_619101-620012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_620101-621012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_621101-622012.nc')] with function argument(s) output_dir = PosixPath('/fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/output/piControl__Zonal_test--time_ocean_zonal_mean_20240510_180003/preproc/fixed_files/thetao_Omon_CMIP6_CanESM5-1_CMIP_piControl_r1i1p2f1_gn_v20190429_'), add_unique_suffix = True, session = Session({'auxiliary_data_dir': PosixPath('/fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/../../config/config-developer.yml'), 'config_file': PosixPath('/fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/home/rkw001/climate_data'), 'drs': {'AMAP': 'default', 'AMAPcmam': 'default', 'CMIP5': 'CCCma', 'CMIP6': 'CCCma', 'CanESM5.1': 'default', 'CanESM5_dev': 'default', 'OBS': 'default', 'RAWOBS': 'default', 'ana4mips': 'default', 'default': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'debug', 'max_datasets': None, 'max_parallel_tasks': None, 'max_years': None, 'output_dir': PosixPath('/fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/output'), 'output_file_type': 'svg', 'profile_diagnostic': False, 'remove_preproc_dir': False, 'resume_from': [], 'rootpath': {'AMAP': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/legacy_tmp/AMAP')], 'AMAPcmam': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/users/mcr001/AMAPCMAM')], 'CMIP5': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/model_output/CMIP5/output')], 'CMIP6': [PosixPath('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6')], 'CanESM2': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/model_output/CMIP5/output/CCCma/CanESM2')], 'CanESM5.1': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/model_output/canesm-5.1'), PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/users/mcr001/tmp/CanESM5.1_subset')], 'CanESM5_dev': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/users'), PosixPath('/space/hall6/sitestore/eccc/crd/ccrn/users')], 'CanESM5_local': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/model_output/CMIP6/final/CMIP6')], 'DKRZ_OBS': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/obs/ESMValTool_obs')], 'NEMO4': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/users'), PosixPath('/space/hall6/sitestore/eccc/crd/ccrn/users')], 'OBS': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/obs/ESMValTool_obs')], 'OBS6': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/obs/ESMValTool_obs')], 'RAWOBS': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/obs/ESMValTool_obs/RAW')], 'ana4mips': [PosixPath('/space/hall6/sitestore/eccc/crd/ccrn/users/scrd113/CMOROBS')], 'ana4mips_v1': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/obs/ESMValTool_obs')], 'default': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/users/cmr203/ncconv/netcdfconv/final/CMIP6')], 'native6': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/obs/ESMValTool_obs')], 'obs4MIPs': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/obs/ESMValTool_obs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'never', 'skip_nonexistent': False, 'write_ncl_interface': False}), short_name = 'thetao', mip = 'Omon', preprocessor = 'time_ocean_zonal_mean', project = 'CMIP6', dataset = 'CanESM5-1', ensemble = 'r1i1p2f1', exp = 'piControl', grid = 'gn', institute = 'CCCma', timerange = '6191/6220', variable_group = 'thetao', diagnostic = 'time_ocean_zonal_mean', recipe_dataset_index = 0, alias = 'CanESM5-1', activity = 'CMIP', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'degC', modeling_realm = ['ocean'], frequency = 'mon', version = 'v20190429' 2024-05-10 18:00:17,438 UTC [2991082] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_file' on the data LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_621101-622012.nc') loaded from original input file(s) [LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_619101-620012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_620101-621012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_621101-622012.nc')] with function argument(s) output_dir = PosixPath('/fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/output/piControl__Zonal_test--time_ocean_zonal_mean_20240510_180003/preproc/fixed_files/thetao_Omon_CMIP6_CanESM5-1_CMIP_piControl_r1i1p2f1_gn_v20190429_'), add_unique_suffix = True, session = Session({'auxiliary_data_dir': PosixPath('/fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/../../config/config-developer.yml'), 'config_file': PosixPath('/fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/home/rkw001/climate_data'), 'drs': {'AMAP': 'default', 'AMAPcmam': 'default', 'CMIP5': 'CCCma', 'CMIP6': 'CCCma', 'CanESM5.1': 'default', 'CanESM5_dev': 'default', 'OBS': 'default', 'RAWOBS': 'default', 'ana4mips': 'default', 'default': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'debug', 'max_datasets': None, 'max_parallel_tasks': None, 'max_years': None, 'output_dir': PosixPath('/fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/output'), 'output_file_type': 'svg', 'profile_diagnostic': False, 'remove_preproc_dir': False, 'resume_from': [], 'rootpath': {'AMAP': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/legacy_tmp/AMAP')], 'AMAPcmam': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/users/mcr001/AMAPCMAM')], 'CMIP5': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/model_output/CMIP5/output')], 'CMIP6': [PosixPath('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6')], 'CanESM2': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/model_output/CMIP5/output/CCCma/CanESM2')], 'CanESM5.1': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/model_output/canesm-5.1'), PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/users/mcr001/tmp/CanESM5.1_subset')], 'CanESM5_dev': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/users'), PosixPath('/space/hall6/sitestore/eccc/crd/ccrn/users')], 'CanESM5_local': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/model_output/CMIP6/final/CMIP6')], 'DKRZ_OBS': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/obs/ESMValTool_obs')], 'NEMO4': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/users'), PosixPath('/space/hall6/sitestore/eccc/crd/ccrn/users')], 'OBS': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/obs/ESMValTool_obs')], 'OBS6': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/obs/ESMValTool_obs')], 'RAWOBS': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/obs/ESMValTool_obs/RAW')], 'ana4mips': [PosixPath('/space/hall6/sitestore/eccc/crd/ccrn/users/scrd113/CMOROBS')], 'ana4mips_v1': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/obs/ESMValTool_obs')], 'default': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/users/cmr203/ncconv/netcdfconv/final/CMIP6')], 'native6': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/obs/ESMValTool_obs')], 'obs4MIPs': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/obs/ESMValTool_obs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'never', 'skip_nonexistent': False, 'write_ncl_interface': False}), short_name = 'thetao', mip = 'Omon', preprocessor = 'time_ocean_zonal_mean', project = 'CMIP6', dataset = 'CanESM5-1', ensemble = 'r1i1p2f1', exp = 'piControl', grid = 'gn', institute = 'CCCma', timerange = '6191/6220', variable_group = 'thetao', diagnostic = 'time_ocean_zonal_mean', recipe_dataset_index = 0, alias = 'CanESM5-1', activity = 'CMIP', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'degC', modeling_realm = ['ocean'], frequency = 'mon', version = 'v20190429' 2024-05-10 18:00:17,438 UTC [2991082] DEBUG esmvalcore.preprocessor:364 Running preprocessor step load 2024-05-10 18:00:17,438 UTC [2991082] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'load' on the data LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_619101-620012.nc') loaded from original input file(s) [LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_619101-620012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_620101-621012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_621101-622012.nc')] with function argument(s) ignore_warnings = None 2024-05-10 18:00:17,438 UTC [2991082] DEBUG esmvalcore.preprocessor._io:145 Loading: /space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_619101-620012.nc 2024-05-10 18:00:17,450 UTC [2928843] INFO esmvalcore._task:793 Progress: 1 tasks running, 0 tasks waiting for ancestors, 0/1 done 2024-05-10 18:00:18,027 UTC [2991082] DEBUG esmvalcore.preprocessor._io:176 Done with loading /space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_619101-620012.nc 2024-05-10 18:00:18,027 UTC [2991082] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'load' on the data LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_620101-621012.nc') loaded from original input file(s) [LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_619101-620012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_620101-621012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_621101-622012.nc')] with function argument(s) ignore_warnings = None 2024-05-10 18:00:18,028 UTC [2991082] DEBUG esmvalcore.preprocessor._io:145 Loading: /space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_620101-621012.nc 2024-05-10 18:00:18,061 UTC [2991082] DEBUG esmvalcore.preprocessor._io:176 Done with loading /space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_620101-621012.nc 2024-05-10 18:00:18,061 UTC [2991082] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'load' on the data LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_621101-622012.nc') loaded from original input file(s) [LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_619101-620012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_620101-621012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_621101-622012.nc')] with function argument(s) ignore_warnings = None 2024-05-10 18:00:18,061 UTC [2991082] DEBUG esmvalcore.preprocessor._io:145 Loading: /space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_621101-622012.nc 2024-05-10 18:00:18,097 UTC [2991082] DEBUG esmvalcore.preprocessor._io:176 Done with loading /space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_621101-622012.nc 2024-05-10 18:00:18,097 UTC [2991082] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_metadata 2024-05-10 18:00:18,122 UTC [2991082] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) [LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_619101-620012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_620101-621012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_621101-622012.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/../../config/config-developer.yml'), 'config_file': PosixPath('/fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/home/rkw001/climate_data'), 'drs': {'AMAP': 'default', 'AMAPcmam': 'default', 'CMIP5': 'CCCma', 'CMIP6': 'CCCma', 'CanESM5.1': 'default', 'CanESM5_dev': 'default', 'OBS': 'default', 'RAWOBS': 'default', 'ana4mips': 'default', 'default': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'debug', 'max_datasets': None, 'max_parallel_tasks': None, 'max_years': None, 'output_dir': PosixPath('/fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/output'), 'output_file_type': 'svg', 'profile_diagnostic': False, 'remove_preproc_dir': False, 'resume_from': [], 'rootpath': {'AMAP': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/legacy_tmp/AMAP')], 'AMAPcmam': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/users/mcr001/AMAPCMAM')], 'CMIP5': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/model_output/CMIP5/output')], 'CMIP6': [PosixPath('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6')], 'CanESM2': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/model_output/CMIP5/output/CCCma/CanESM2')], 'CanESM5.1': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/model_output/canesm-5.1'), PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/users/mcr001/tmp/CanESM5.1_subset')], 'CanESM5_dev': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/users'), PosixPath('/space/hall6/sitestore/eccc/crd/ccrn/users')], 'CanESM5_local': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/model_output/CMIP6/final/CMIP6')], 'DKRZ_OBS': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/obs/ESMValTool_obs')], 'NEMO4': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/users'), PosixPath('/space/hall6/sitestore/eccc/crd/ccrn/users')], 'OBS': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/obs/ESMValTool_obs')], 'OBS6': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/obs/ESMValTool_obs')], 'RAWOBS': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/obs/ESMValTool_obs/RAW')], 'ana4mips': [PosixPath('/space/hall6/sitestore/eccc/crd/ccrn/users/scrd113/CMOROBS')], 'ana4mips_v1': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/obs/ESMValTool_obs')], 'default': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/users/cmr203/ncconv/netcdfconv/final/CMIP6')], 'native6': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/obs/ESMValTool_obs')], 'obs4MIPs': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/obs/ESMValTool_obs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'never', 'skip_nonexistent': False, 'write_ncl_interface': False}), short_name = 'thetao', mip = 'Omon', preprocessor = 'time_ocean_zonal_mean', project = 'CMIP6', dataset = 'CanESM5-1', ensemble = 'r1i1p2f1', exp = 'piControl', grid = 'gn', institute = 'CCCma', timerange = '6191/6220', variable_group = 'thetao', diagnostic = 'time_ocean_zonal_mean', recipe_dataset_index = 0, alias = 'CanESM5-1', activity = 'CMIP', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'degC', modeling_realm = ['ocean'], frequency = 'mon', version = 'v20190429' 2024-05-10 18:00:18,122 UTC [2991082] DEBUG esmvalcore.cmor._fixes.fix:399 Multidimensional longitude coordinate is not set in CMOR standard, ESMValTool will change the original value of 'longitude' to 'lon' to match the one-dimensional case (for file /space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_619101-620012.nc) 2024-05-10 18:00:18,123 UTC [2991082] DEBUG esmvalcore.cmor._fixes.fix:399 Multidimensional latitude coordinate is not set in CMOR standard, ESMValTool will change the original value of 'latitude' to 'lat' to match the one-dimensional case (for file /space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_619101-620012.nc) 2024-05-10 18:00:18,123 UTC [2991082] DEBUG esmvalcore.cmor._fixes.fix:399 Generic level coordinate olevel will be checked against depth_coord coordinate information (for file /space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_619101-620012.nc) 2024-05-10 18:00:18,203 UTC [2991082] DEBUG esmvalcore.cmor.check:270 There were metadata changes in variable thetao: Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file /space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_619101-620012.nc 2024-05-10 18:00:18,203 UTC [2991082] DEBUG esmvalcore.cmor._fixes.fix:399 Multidimensional longitude coordinate is not set in CMOR standard, ESMValTool will change the original value of 'longitude' to 'lon' to match the one-dimensional case (for file /space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_620101-621012.nc) 2024-05-10 18:00:18,203 UTC [2991082] DEBUG esmvalcore.cmor._fixes.fix:399 Multidimensional latitude coordinate is not set in CMOR standard, ESMValTool will change the original value of 'latitude' to 'lat' to match the one-dimensional case (for file /space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_620101-621012.nc) 2024-05-10 18:00:18,203 UTC [2991082] DEBUG esmvalcore.cmor._fixes.fix:399 Generic level coordinate olevel will be checked against depth_coord coordinate information (for file /space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_620101-621012.nc) 2024-05-10 18:00:18,270 UTC [2991082] DEBUG esmvalcore.cmor.check:270 There were metadata changes in variable thetao: Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file /space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_620101-621012.nc 2024-05-10 18:00:18,270 UTC [2991082] DEBUG esmvalcore.cmor._fixes.fix:399 Multidimensional longitude coordinate is not set in CMOR standard, ESMValTool will change the original value of 'longitude' to 'lon' to match the one-dimensional case (for file /space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_621101-622012.nc) 2024-05-10 18:00:18,270 UTC [2991082] DEBUG esmvalcore.cmor._fixes.fix:399 Multidimensional latitude coordinate is not set in CMOR standard, ESMValTool will change the original value of 'latitude' to 'lat' to match the one-dimensional case (for file /space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_621101-622012.nc) 2024-05-10 18:00:18,270 UTC [2991082] DEBUG esmvalcore.cmor._fixes.fix:399 Generic level coordinate olevel will be checked against depth_coord coordinate information (for file /space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_621101-622012.nc) 2024-05-10 18:00:18,341 UTC [2991082] DEBUG esmvalcore.cmor.check:270 There were metadata changes in variable thetao: Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file /space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_621101-622012.nc 2024-05-10 18:00:18,341 UTC [2991082] DEBUG esmvalcore.preprocessor:364 Running preprocessor step concatenate 2024-05-10 18:00:18,345 UTC [2991082] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) [LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_619101-620012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_620101-621012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_621101-622012.nc')] with function argument(s) check_level = 2024-05-10 18:00:18,348 UTC [2991082] DEBUG esmvalcore.preprocessor._io:260 Using sea_water_potential_temperature / (degC) (time: 120; depth: 45; second spatial index for variables stored on an unstructured grid: 291; first spatial index for variables stored on an unstructured grid: 360) Dimension coordinates: time x - - - depth - x - - second spatial index for variables stored on an unstructured grid - - x - first spatial index for variables stored on an unstructured grid - - - x Auxiliary coordinates: latitude - - x x longitude - - x x Cell methods: 0 area: mean where sea 1 time: mean Attributes: CCCma_model_hash 'c8708a7ff559a1daeee0b713f94508a26a04c6b7' CCCma_parent_runid 'v510-pict' CCCma_pycmor_hash '0db7dba6172f1fb31dd9a4af1ae40a53189337ea' CCCma_runid 'v510b-p2-pict' Conventions 'CF-1.7 CMIP-6.2' YMDH_branch_time_in_child '6000:01:01:00' YMDH_branch_time_in_parent '6000:01:01:00' activity_id 'CMIP' branch_method 'Spin-up documentation' branch_time_in_child 1514750.0 branch_time_in_parent 1514750.0 cmor_version '3.5.0' contact 'f.cccma.info-info.ccmac.f@ec.gc.ca' data_specs_version '01.00.33' experiment 'pre-industrial control' experiment_id 'piControl' external_variables 'areacello volcello' forcing_index 1 frequency 'mon' further_info_url 'https://furtherinfo.es-doc.org/CMIP6.CCCma.CanESM5-1.piControl.none.r1 ...' grid 'ORCA1 tripolar grid, 1 deg with refinement to 1/3 deg within 20 degrees ...' grid_label 'gn' initialization_index 1 institution 'Canadian Centre for Climate Modelling and Analysis, Environment and Climate ...' institution_id 'CCCma' license 'CMIP6 model data produced by The Government of Canada (Canadian Centre ...' mip_era 'CMIP6' nominal_resolution '100 km' original_name 'votemper' parent_activity_id 'CMIP' parent_experiment_id 'piControl-spinup' parent_mip_era 'CMIP6' parent_source_id 'CanESM5-1' parent_time_units 'days since 1850-1-1 00:00:00' parent_variant_label 'r1i1p1f1' physics_index 2 product 'model-output' realization_index 1 realm 'ocean' references 'Geoscientific Model Development Special issue on CanESM5 (https://www. ...' source 'CanESM5.1 (2022): \naerosol: interactive\natmos: CanAM5.1 (T63L49 native ...' source_id 'CanESM5-1' source_type 'AOGCM' sub_experiment 'none' sub_experiment_id 'none' table_id 'Omon' table_info 'Creation Date:(18 November 2020) MD5:85e53552ecb33e74760ede2e723d3d22' title 'CanESM5-1 output prepared for CMIP6' variable_id 'thetao' variant_label 'r1i1p2f1' version 'v20190429' 2024-05-10 18:00:18,351 UTC [2991082] DEBUG esmvalcore.preprocessor._io:260 Using sea_water_potential_temperature / (degC) (time: 120; depth: 45; second spatial index for variables stored on an unstructured grid: 291; first spatial index for variables stored on an unstructured grid: 360) Dimension coordinates: time x - - - depth - x - - second spatial index for variables stored on an unstructured grid - - x - first spatial index for variables stored on an unstructured grid - - - x Auxiliary coordinates: latitude - - x x longitude - - x x Cell methods: 0 area: mean where sea 1 time: mean Attributes: CCCma_model_hash 'c8708a7ff559a1daeee0b713f94508a26a04c6b7' CCCma_parent_runid 'v510-pict' CCCma_pycmor_hash '0db7dba6172f1fb31dd9a4af1ae40a53189337ea' CCCma_runid 'v510b-p2-pict' Conventions 'CF-1.7 CMIP-6.2' YMDH_branch_time_in_child '6000:01:01:00' YMDH_branch_time_in_parent '6000:01:01:00' activity_id 'CMIP' branch_method 'Spin-up documentation' branch_time_in_child 1514750.0 branch_time_in_parent 1514750.0 cmor_version '3.5.0' contact 'f.cccma.info-info.ccmac.f@ec.gc.ca' data_specs_version '01.00.33' experiment 'pre-industrial control' experiment_id 'piControl' external_variables 'areacello volcello' forcing_index 1 frequency 'mon' further_info_url 'https://furtherinfo.es-doc.org/CMIP6.CCCma.CanESM5-1.piControl.none.r1 ...' grid 'ORCA1 tripolar grid, 1 deg with refinement to 1/3 deg within 20 degrees ...' grid_label 'gn' initialization_index 1 institution 'Canadian Centre for Climate Modelling and Analysis, Environment and Climate ...' institution_id 'CCCma' license 'CMIP6 model data produced by The Government of Canada (Canadian Centre ...' mip_era 'CMIP6' nominal_resolution '100 km' original_name 'votemper' parent_activity_id 'CMIP' parent_experiment_id 'piControl-spinup' parent_mip_era 'CMIP6' parent_source_id 'CanESM5-1' parent_time_units 'days since 1850-1-1 00:00:00' parent_variant_label 'r1i1p1f1' physics_index 2 product 'model-output' realization_index 1 realm 'ocean' references 'Geoscientific Model Development Special issue on CanESM5 (https://www. ...' source 'CanESM5.1 (2022): \naerosol: interactive\natmos: CanAM5.1 (T63L49 native ...' source_id 'CanESM5-1' source_type 'AOGCM' sub_experiment 'none' sub_experiment_id 'none' table_id 'Omon' table_info 'Creation Date:(18 November 2020) MD5:85e53552ecb33e74760ede2e723d3d22' title 'CanESM5-1 output prepared for CMIP6' variable_id 'thetao' variant_label 'r1i1p2f1' version 'v20190429' 2024-05-10 18:00:18,353 UTC [2991082] DEBUG esmvalcore.preprocessor._io:294 Using sea_water_potential_temperature / (degC) (time: 120; depth: 45; second spatial index for variables stored on an unstructured grid: 291; first spatial index for variables stored on an unstructured grid: 360) Dimension coordinates: time x - - - depth - x - - second spatial index for variables stored on an unstructured grid - - x - first spatial index for variables stored on an unstructured grid - - - x Auxiliary coordinates: latitude - - x x longitude - - x x Cell methods: 0 area: mean where sea 1 time: mean Attributes: CCCma_model_hash 'c8708a7ff559a1daeee0b713f94508a26a04c6b7' CCCma_parent_runid 'v510-pict' CCCma_pycmor_hash '0db7dba6172f1fb31dd9a4af1ae40a53189337ea' CCCma_runid 'v510b-p2-pict' Conventions 'CF-1.7 CMIP-6.2' YMDH_branch_time_in_child '6000:01:01:00' YMDH_branch_time_in_parent '6000:01:01:00' activity_id 'CMIP' branch_method 'Spin-up documentation' branch_time_in_child 1514750.0 branch_time_in_parent 1514750.0 cmor_version '3.5.0' contact 'f.cccma.info-info.ccmac.f@ec.gc.ca' data_specs_version '01.00.33' experiment 'pre-industrial control' experiment_id 'piControl' external_variables 'areacello volcello' forcing_index 1 frequency 'mon' further_info_url 'https://furtherinfo.es-doc.org/CMIP6.CCCma.CanESM5-1.piControl.none.r1 ...' grid 'ORCA1 tripolar grid, 1 deg with refinement to 1/3 deg within 20 degrees ...' grid_label 'gn' initialization_index 1 institution 'Canadian Centre for Climate Modelling and Analysis, Environment and Climate ...' institution_id 'CCCma' license 'CMIP6 model data produced by The Government of Canada (Canadian Centre ...' mip_era 'CMIP6' nominal_resolution '100 km' original_name 'votemper' parent_activity_id 'CMIP' parent_experiment_id 'piControl-spinup' parent_mip_era 'CMIP6' parent_source_id 'CanESM5-1' parent_time_units 'days since 1850-1-1 00:00:00' parent_variant_label 'r1i1p1f1' physics_index 2 product 'model-output' realization_index 1 realm 'ocean' references 'Geoscientific Model Development Special issue on CanESM5 (https://www. ...' source 'CanESM5.1 (2022): \naerosol: interactive\natmos: CanAM5.1 (T63L49 native ...' source_id 'CanESM5-1' source_type 'AOGCM' sub_experiment 'none' sub_experiment_id 'none' table_id 'Omon' table_info 'Creation Date:(18 November 2020) MD5:85e53552ecb33e74760ede2e723d3d22' title 'CanESM5-1 output prepared for CMIP6' variable_id 'thetao' variant_label 'r1i1p2f1' version 'v20190429' 2024-05-10 18:00:18,628 UTC [2991082] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_metadata 2024-05-10 18:00:18,630 UTC [2991082] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) [LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_619101-620012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_620101-621012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_621101-622012.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'Omon', frequency = 'mon', short_name = 'thetao' 2024-05-10 18:00:18,674 UTC [2991082] DEBUG esmvalcore.cmor.check:270 There were metadata changes in variable thetao: Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file 2024-05-10 18:00:18,675 UTC [2991082] DEBUG esmvalcore.preprocessor:364 Running preprocessor step clip_timerange 2024-05-10 18:00:18,676 UTC [2991082] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) [LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_619101-620012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_620101-621012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_621101-622012.nc')] with function argument(s) timerange = '6191/6220' 2024-05-10 18:00:18,682 UTC [2991082] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_data 2024-05-10 18:00:18,683 UTC [2991082] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_data' on the data loaded from original input file(s) [LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_619101-620012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_620101-621012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_621101-622012.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/../../config/config-developer.yml'), 'config_file': PosixPath('/fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/home/rkw001/climate_data'), 'drs': {'AMAP': 'default', 'AMAPcmam': 'default', 'CMIP5': 'CCCma', 'CMIP6': 'CCCma', 'CanESM5.1': 'default', 'CanESM5_dev': 'default', 'OBS': 'default', 'RAWOBS': 'default', 'ana4mips': 'default', 'default': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'debug', 'max_datasets': None, 'max_parallel_tasks': None, 'max_years': None, 'output_dir': PosixPath('/fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/output'), 'output_file_type': 'svg', 'profile_diagnostic': False, 'remove_preproc_dir': False, 'resume_from': [], 'rootpath': {'AMAP': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/legacy_tmp/AMAP')], 'AMAPcmam': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/users/mcr001/AMAPCMAM')], 'CMIP5': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/model_output/CMIP5/output')], 'CMIP6': [PosixPath('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6')], 'CanESM2': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/model_output/CMIP5/output/CCCma/CanESM2')], 'CanESM5.1': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/model_output/canesm-5.1'), PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/users/mcr001/tmp/CanESM5.1_subset')], 'CanESM5_dev': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/users'), PosixPath('/space/hall6/sitestore/eccc/crd/ccrn/users')], 'CanESM5_local': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/model_output/CMIP6/final/CMIP6')], 'DKRZ_OBS': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/obs/ESMValTool_obs')], 'NEMO4': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/users'), PosixPath('/space/hall6/sitestore/eccc/crd/ccrn/users')], 'OBS': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/obs/ESMValTool_obs')], 'OBS6': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/obs/ESMValTool_obs')], 'RAWOBS': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/obs/ESMValTool_obs/RAW')], 'ana4mips': [PosixPath('/space/hall6/sitestore/eccc/crd/ccrn/users/scrd113/CMOROBS')], 'ana4mips_v1': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/obs/ESMValTool_obs')], 'default': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/users/cmr203/ncconv/netcdfconv/final/CMIP6')], 'native6': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/obs/ESMValTool_obs')], 'obs4MIPs': [PosixPath('/space/hall5/sitestore/eccc/crd/ccrn/obs/ESMValTool_obs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'never', 'skip_nonexistent': False, 'write_ncl_interface': False}), short_name = 'thetao', mip = 'Omon', preprocessor = 'time_ocean_zonal_mean', project = 'CMIP6', dataset = 'CanESM5-1', ensemble = 'r1i1p2f1', exp = 'piControl', grid = 'gn', institute = 'CCCma', timerange = '6191/6220', variable_group = 'thetao', diagnostic = 'time_ocean_zonal_mean', recipe_dataset_index = 0, alias = 'CanESM5-1', activity = 'CMIP', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'degC', modeling_realm = ['ocean'], frequency = 'mon', version = 'v20190429' 2024-05-10 18:00:18,684 UTC [2991082] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_data 2024-05-10 18:00:18,684 UTC [2991082] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) [LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_619101-620012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_620101-621012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_621101-622012.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'Omon', frequency = 'mon', short_name = 'thetao' 2024-05-10 18:00:18,685 UTC [2991082] DEBUG esmvalcore.preprocessor:364 Running preprocessor step add_supplementary_variables 2024-05-10 18:00:18,686 UTC [2991082] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'add_supplementary_variables' on the data loaded from original input file(s) [LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_619101-620012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_620101-621012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_621101-622012.nc')] with function argument(s) supplementary_cubes = [] 2024-05-10 18:00:18,686 UTC [2991082] DEBUG esmvalcore.preprocessor:364 Running preprocessor step climate_statistics 2024-05-10 18:00:18,687 UTC [2991082] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) [LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_619101-620012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_620101-621012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_621101-622012.nc')] with function argument(s) operator = 'mean', period = 'full' 2024-05-10 18:00:39,386 UTC [2991082] DEBUG esmvalcore.preprocessor._time:842 climate_statistics changed dtype from float32 to float64, changing back 2024-05-10 18:00:39,387 UTC [2991082] DEBUG esmvalcore.preprocessor:364 Running preprocessor step extract_levels 2024-05-10 18:00:39,392 UTC [2991082] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) [LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_619101-620012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_620101-621012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_621101-622012.nc')] with function argument(s) levels = [0, 10, 20, 50, 100, 200, 300, 500, 750, 1000, 1250, 1500, 1750, 2000, 2250, 2500, 2750, 3000, 3250, 3500, 3750, 4000, 4250, 4500, 4750, 5000, 5250, 5500, 5750], scheme = 'linear_extrapolate', coordinate = 'depth' 2024-05-10 18:00:39,470 UTC [2991082] DEBUG esmvalcore.preprocessor:364 Running preprocessor step regrid 2024-05-10 18:00:39,472 UTC [2991082] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'regrid' on the data loaded from original input file(s) [LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_619101-620012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_620101-621012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_621101-622012.nc')] with function argument(s) target_grid = '1x1', scheme = 'nearest' 2024-05-10 19:07:31,644 UTC [2991082] DEBUG esmvalcore.preprocessor:364 Running preprocessor step zonal_statistics 2024-05-10 19:07:31,679 UTC [2991082] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'zonal_statistics' on the data loaded from original input file(s) [LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_619101-620012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_620101-621012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_621101-622012.nc')] with function argument(s) operator = 'mean' 2024-05-10 19:07:31,749 UTC [2991082] DEBUG esmvalcore.preprocessor:364 Running preprocessor step save 2024-05-10 19:07:31,752 UTC [2991082] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'save' on the data [] loaded from original input file(s) [LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_619101-620012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_620101-621012.nc'), LocalFile('/space/hall5/sitestore/eccc/crd/crd_shared/ESGF_downloads/CMIP6/CMIP/CCCma/CanESM5-1/piControl/r1i1p2f1/Omon/thetao/gn/v20190429/thetao_Omon_CanESM5-1_piControl_r1i1p2f1_gn_621101-622012.nc')] with function argument(s) compress = False, filename = PosixPath('/fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/output/piControl__Zonal_test--time_ocean_zonal_mean_20240510_180003/preproc/time_ocean_zonal_mean/thetao/CMIP6_CanESM5-1_Omon_piControl_r1i1p2f1_thetao_6191-6220.nc') 2024-05-10 19:07:31,786 UTC [2991082] DEBUG esmvalcore.preprocessor._io:452 Saving cube: sea_water_potential_temperature / (degC) (depth: 29; latitude: 180) Dimension coordinates: depth x - latitude - x Scalar coordinates: longitude 180.0 degrees_east, bound=(0.0, 360.0) degrees_east time 6206-01-01 00:00:00, bound=(6191-01-01 00:00:00, 6221-01-01 00:00:00) Cell methods: 0 area: mean where sea 1 time: mean 2 time: mean 3 longitude: mean Attributes: CCCma_model_hash 'c8708a7ff559a1daeee0b713f94508a26a04c6b7' CCCma_parent_runid 'v510-pict' CCCma_pycmor_hash '0db7dba6172f1fb31dd9a4af1ae40a53189337ea' CCCma_runid 'v510b-p2-pict' Conventions 'CF-1.7 CMIP-6.2' YMDH_branch_time_in_child '6000:01:01:00' YMDH_branch_time_in_parent '6000:01:01:00' activity_id 'CMIP' branch_method 'Spin-up documentation' branch_time_in_child 1514750.0 branch_time_in_parent 1514750.0 cmor_version '3.5.0' contact 'f.cccma.info-info.ccmac.f@ec.gc.ca' data_specs_version '01.00.33' experiment 'pre-industrial control' experiment_id 'piControl' external_variables 'areacello volcello' forcing_index 1 frequency 'mon' further_info_url 'https://furtherinfo.es-doc.org/CMIP6.CCCma.CanESM5-1.piControl.none.r1 ...' grid 'ORCA1 tripolar grid, 1 deg with refinement to 1/3 deg within 20 degrees ...' grid_label 'gn' initialization_index 1 institution 'Canadian Centre for Climate Modelling and Analysis, Environment and Climate ...' institution_id 'CCCma' license 'CMIP6 model data produced by The Government of Canada (Canadian Centre ...' mip_era 'CMIP6' nominal_resolution '100 km' original_name 'votemper' parent_activity_id 'CMIP' parent_experiment_id 'piControl-spinup' parent_mip_era 'CMIP6' parent_source_id 'CanESM5-1' parent_time_units 'days since 1850-1-1 00:00:00' parent_variant_label 'r1i1p1f1' physics_index 2 product 'model-output' realization_index 1 realm 'ocean' references 'Geoscientific Model Development Special issue on CanESM5 (https://www. ...' source 'CanESM5.1 (2022): \naerosol: interactive\natmos: CanAM5.1 (T63L49 native ...' source_id 'CanESM5-1' source_type 'AOGCM' sub_experiment 'none' sub_experiment_id 'none' table_id 'Omon' table_info 'Creation Date:(18 November 2020) MD5:85e53552ecb33e74760ede2e723d3d22' title 'CanESM5-1 output prepared for CMIP6' variable_id 'thetao' variant_label 'r1i1p2f1' version 'v20190429' with realized data to /fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/output/piControl__Zonal_test--time_ocean_zonal_mean_20240510_180003/preproc/time_ocean_zonal_mean/thetao/CMIP6_CanESM5-1_Omon_piControl_r1i1p2f1_thetao_6191-6220.nc 2024-05-10 19:07:31,843 UTC [2991082] WARNING py.warnings:110 /space/hall5/sitestore/eccc/crd/ccrn/users/rkw001/miniconda3/envs/a4d_env_EVTmain/lib/python3.11/site-packages/iris/fileformats/netcdf/saver.py:2670: IrisDeprecation: Saving to netcdf with legacy-style attribute handling for backwards compatibility. This mode is deprecated since Iris 3.8, and will eventually be removed. Please consider enabling the new split-attributes handling mode, by setting 'iris.FUTURE.save_split_attrs = True'. warn_deprecated(message) 2024-05-10 19:07:33,758 UTC [2991082] INFO esmvalcore._task:266 Successfully completed task time_ocean_zonal_mean/thetao (priority 0) in 1:07:16.402508 2024-05-10 19:07:33,803 UTC [2928843] INFO esmvalcore._task:793 Progress: 0 tasks running, 0 tasks waiting for ancestors, 1/1 done 2024-05-10 19:07:33,803 UTC [2928843] INFO esmvalcore._task:798 Successfully completed all tasks. 2024-05-10 19:07:33,830 UTC [2928843] INFO esmvalcore._recipe.recipe:1076 Wrote recipe with version numbers and wildcards to: file:///fs/homeu2/eccc/crd/ccrn_shr/rkw001/A4D_standard_diagnostics__v1.3/work/test_envs/output/piControl__Zonal_test--time_ocean_zonal_mean_20240510_180003/run/piControl__Zonal_test--time_ocean_zonal_mean_filled.yml 2024-05-10 19:07:34,503 UTC [2928843] INFO esmvalcore._task:128 Maximum memory used (estimate): 23.0 GB 2024-05-10 19:07:34,504 UTC [2928843] INFO esmvalcore._task:130 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2024-05-10 19:07:34,504 UTC [2928843] ERROR esmvalcore._main:530 Program terminated abnormally, see stack trace below for more information: Traceback (most recent call last): File "/space/hall5/sitestore/eccc/crd/ccrn/users/rkw001/miniconda3/envs/a4d_env_EVTmain/lib/python3.11/site-packages/esmvalcore/_main.py", line 518, in run fire.Fire(ESMValTool()) File "/space/hall5/sitestore/eccc/crd/ccrn/users/rkw001/miniconda3/envs/a4d_env_EVTmain/lib/python3.11/site-packages/fire/core.py", line 143, in Fire component_trace = _Fire(component, args, parsed_flag_args, context, name) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/space/hall5/sitestore/eccc/crd/ccrn/users/rkw001/miniconda3/envs/a4d_env_EVTmain/lib/python3.11/site-packages/fire/core.py", line 477, in _Fire component, remaining_args = _CallAndUpdateTrace( ^^^^^^^^^^^^^^^^^^^^ File "/space/hall5/sitestore/eccc/crd/ccrn/users/rkw001/miniconda3/envs/a4d_env_EVTmain/lib/python3.11/site-packages/fire/core.py", line 693, in _CallAndUpdateTrace component = fn(*varargs, **kwargs) ^^^^^^^^^^^^^^^^^^^^^^ File "/space/hall5/sitestore/eccc/crd/ccrn/users/rkw001/miniconda3/envs/a4d_env_EVTmain/lib/python3.11/site-packages/esmvalcore/_main.py", line 405, in run self._run(recipe, session) File "/space/hall5/sitestore/eccc/crd/ccrn/users/rkw001/miniconda3/envs/a4d_env_EVTmain/lib/python3.11/site-packages/esmvalcore/_main.py", line 447, in _run process_recipe(recipe_file=recipe, session=session) File "/space/hall5/sitestore/eccc/crd/ccrn/users/rkw001/miniconda3/envs/a4d_env_EVTmain/lib/python3.11/site-packages/esmvalcore/_main.py", line 130, in process_recipe recipe.run() File "/space/hall5/sitestore/eccc/crd/ccrn/users/rkw001/miniconda3/envs/a4d_env_EVTmain/lib/python3.11/site-packages/esmvalcore/_recipe/recipe.py", line 1079, in run self.write_html_summary() File "/space/hall5/sitestore/eccc/crd/ccrn/users/rkw001/miniconda3/envs/a4d_env_EVTmain/lib/python3.11/site-packages/esmvalcore/_recipe/recipe.py", line 1126, in write_html_summary output = RecipeOutput.from_core_recipe_output(output) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/space/hall5/sitestore/eccc/crd/ccrn/users/rkw001/miniconda3/envs/a4d_env_EVTmain/lib/python3.11/site-packages/esmvalcore/experimental/recipe_output.py", line 227, in from_core_recipe_output info.resolve() File "/space/hall5/sitestore/eccc/crd/ccrn/users/rkw001/miniconda3/envs/a4d_env_EVTmain/lib/python3.11/site-packages/esmvalcore/experimental/recipe_info.py", line 154, in resolve _ = self.authors ^^^^^^^^^^^^ File "/space/hall5/sitestore/eccc/crd/ccrn/users/rkw001/miniconda3/envs/a4d_env_EVTmain/lib/python3.11/site-packages/esmvalcore/experimental/recipe_info.py", line 103, in authors self._authors = tuple(Contributor.from_tag(tag) for tag in tags) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/space/hall5/sitestore/eccc/crd/ccrn/users/rkw001/miniconda3/envs/a4d_env_EVTmain/lib/python3.11/site-packages/esmvalcore/experimental/recipe_info.py", line 103, in self._authors = tuple(Contributor.from_tag(tag) for tag in tags) ^^^^^^^^^^^^^^^^^^^^^^^^^ File "/space/hall5/sitestore/eccc/crd/ccrn/users/rkw001/miniconda3/envs/a4d_env_EVTmain/lib/python3.11/site-packages/esmvalcore/experimental/recipe_metadata.py", line 60, in from_tag mapping = TAGS.get_tag_value(section='authors', tag=tag) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/space/hall5/sitestore/eccc/crd/ccrn/users/rkw001/miniconda3/envs/a4d_env_EVTmain/lib/python3.11/site-packages/esmvalcore/config/_diagnostics.py", line 136, in get_tag_value raise ValueError(f"Section '{section}' does not exist{postfix}") ValueError: Section 'authors' does not exist 2024-05-10 19:07:34,598 UTC [2928843] INFO esmvalcore._main:534 If you have a question or need help, please start a new discussion on https://github.com/ESMValGroup/ESMValTool/discussions If you suspect this is a bug, please open an issue on https://github.com/ESMValGroup/ESMValTool/issues To make it easier to find out what the problem is, please consider attaching the files run/recipe_*.yml and run/main_log_debug.txt from the output directory.