2022-01-18 11:27:01,925 UTC [24125] INFO esmvalcore._main:450 ______________________________________________________________________ _____ ____ __ ____ __ _ _____ _ | ____/ ___|| \/ \ \ / /_ _| |_ _|__ ___ | | | _| \___ \| |\/| |\ \ / / _` | | | |/ _ \ / _ \| | | |___ ___) | | | | \ V / (_| | | | | (_) | (_) | | |_____|____/|_| |_| \_/ \__,_|_| |_|\___/ \___/|_| ______________________________________________________________________ ESMValTool - Earth System Model Evaluation Tool. http://www.esmvaltool.org CORE DEVELOPMENT TEAM AND CONTACTS: Birgit Hassler (Co-PI; DLR, Germany - birgit.hassler@dlr.de) Alistair Sellar (Co-PI; Met Office, UK - alistair.sellar@metoffice.gov.uk) Bouwe Andela (Netherlands eScience Center, The Netherlands - b.andela@esciencecenter.nl) Lee de Mora (PML, UK - ledm@pml.ac.uk) Niels Drost (Netherlands eScience Center, The Netherlands - n.drost@esciencecenter.nl) Veronika Eyring (DLR, Germany - veronika.eyring@dlr.de) Bettina Gier (UBremen, Germany - gier@uni-bremen.de) Remi Kazeroni (DLR, Germany - remi.kazeroni@dlr.de) Nikolay Koldunov (AWI, Germany - nikolay.koldunov@awi.de) Axel Lauer (DLR, Germany - axel.lauer@dlr.de) Saskia Loosveldt-Tomas (BSC, Spain - saskia.loosveldt@bsc.es) Ruth Lorenz (ETH Zurich, Switzerland - ruth.lorenz@env.ethz.ch) Benjamin Mueller (LMU, Germany - b.mueller@iggf.geo.uni-muenchen.de) Valeriu Predoi (URead, UK - valeriu.predoi@ncas.ac.uk) Mattia Righi (DLR, Germany - mattia.righi@dlr.de) Manuel Schlund (DLR, Germany - manuel.schlund@dlr.de) Breixo Solino Fernandez (DLR, Germany - breixo.solinofernandez@dlr.de) Javier Vegas-Regidor (BSC, Spain - javier.vegas@bsc.es) Klaus Zimmermann (SMHI, Sweden - klaus.zimmermann@smhi.se) For further help, please read the documentation at http://docs.esmvaltool.org. Have fun! 2022-01-18 11:27:01,927 UTC [24125] INFO esmvalcore._main:451 Package versions 2022-01-18 11:27:01,927 UTC [24125] INFO esmvalcore._main:452 ---------------- 2022-01-18 11:27:01,927 UTC [24125] INFO esmvalcore._main:453 ESMValCore: 2.4.0 2022-01-18 11:27:01,927 UTC [24125] INFO esmvalcore._main:455 ESMValTool: 2.4.0 2022-01-18 11:27:01,928 UTC [24125] INFO esmvalcore._main:456 ---------------- 2022-01-18 11:27:01,928 UTC [24125] INFO esmvalcore._main:457 Using config file /home/b/b309141/config/DKRZ_default.yml 2022-01-18 11:27:01,928 UTC [24125] INFO esmvalcore._main:458 Writing program log files to: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/run/main_log.txt /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/run/main_log_debug.txt 2022-01-18 11:27:01,928 UTC [24125] INFO esmvalcore._config._esgf_pyclient:118 Using default ESGF configuration, configuration file /home/b/b309141/.esmvaltool/esgf-pyclient.yml not present. 2022-01-18 11:27:01,928 UTC [24125] WARNING esmvalcore._config._esgf_pyclient:165 ESGF credentials missing, only data that is accessible without logging in will be available. See https://esgf.github.io/esgf-user-support/user_guide.html for instructions on how to create an account if you do not have one yet. Next, configure your system so esmvaltool can use your credentials. This can be done using the keyring package, or you can just enter them in /home/b/b309141/.esmvaltool/esgf-pyclient.yml. keyring ======= First install the keyring package (requires a supported backend, see https://pypi.org/project/keyring/): $ pip install keyring Next, set your username and password by running the commands: $ keyring set ESGF hostname $ keyring set ESGF username $ keyring set ESGF password To check that you entered your credentials correctly, run: $ keyring get ESGF hostname $ keyring get ESGF username $ keyring get ESGF password configuration file ================== You can store the hostname, username, and password or your OpenID account in a plain text in the file /home/b/b309141/.esmvaltool/esgf-pyclient.yml like this: logon: hostname: "your-hostname" username: "your-username" password: "your-password" or your can configure an interactive log in: logon: interactive: true Note that storing your password in plain text in the configuration file is less secure. On shared systems, make sure the permissions of the file are set so only you can read it, i.e. $ ls -l /home/b/b309141/.esmvaltool/esgf-pyclient.yml shows permissions -rw-------. 2022-01-18 11:27:01,932 UTC [24125] INFO esmvalcore._main:86 Starting the Earth System Model Evaluation Tool at time: 2022-01-18 11:27:01 UTC 2022-01-18 11:27:01,932 UTC [24125] INFO esmvalcore._main:90 ---------------------------------------------------------------------- 2022-01-18 11:27:01,932 UTC [24125] INFO esmvalcore._main:91 RECIPE = /home/b/b309141/ESMValTool/esmvaltool/recipes/recipe_ocean_bgc.yml 2022-01-18 11:27:01,932 UTC [24125] INFO esmvalcore._main:92 RUNDIR = /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/run 2022-01-18 11:27:01,932 UTC [24125] INFO esmvalcore._main:93 WORKDIR = /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/work 2022-01-18 11:27:01,932 UTC [24125] INFO esmvalcore._main:94 PREPROCDIR = /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc 2022-01-18 11:27:01,932 UTC [24125] INFO esmvalcore._main:95 PLOTDIR = /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/plots 2022-01-18 11:27:01,933 UTC [24125] INFO esmvalcore._main:96 ---------------------------------------------------------------------- 2022-01-18 11:27:01,933 UTC [24125] INFO esmvalcore._main:100 Running tasks using at most 8 processes 2022-01-18 11:27:01,933 UTC [24125] INFO esmvalcore._main:102 If your system hangs during execution, it may not have enough memory for keeping this number of tasks in memory. 2022-01-18 11:27:01,933 UTC [24125] INFO esmvalcore._main:105 If you experience memory problems, try reducing 'max_parallel_tasks' in your user configuration file. 2022-01-18 11:27:02,035 UTC [24125] DEBUG esmvalcore._recipe_checks:47 Checking recipe against schema /mnt/lustre02/work/bd0854/b309141/repos/ESMValCore/esmvalcore/recipe_schema.yml 2022-01-18 11:27:02,120 UTC [24125] DEBUG esmvalcore._recipe:1183 Retrieving diagnostics from recipe 2022-01-18 11:27:02,120 UTC [24125] DEBUG esmvalcore._recipe:1320 Populating list of variables for diagnostic diag_timeseries_volume_average_vs_WOA 2022-01-18 11:27:02,121 UTC [24125] DEBUG esmvalcore._config._config:48 Loading extra facets from /mnt/lustre02/work/bd0854/b309141/repos/ESMValCore/esmvalcore/_config/extra_facets/cmip5-institutes.yml 2022-01-18 11:27:02,150 UTC [24125] DEBUG esmvalcore._config._config:48 Loading extra facets from /mnt/lustre02/work/bd0854/b309141/repos/ESMValCore/esmvalcore/_config/extra_facets/cmip5-product.yml 2022-01-18 11:27:02,158 UTC [24125] DEBUG esmvalcore._recipe:1450 Setting script for diagnostic diag_timeseries_volume_average_vs_WOA 2022-01-18 11:27:02,158 UTC [24125] DEBUG esmvalcore._recipe:1320 Populating list of variables for diagnostic diag_timeseries_volume_average_no_obs 2022-01-18 11:27:02,159 UTC [24125] DEBUG esmvalcore._recipe:1450 Setting script for diagnostic diag_timeseries_volume_average_no_obs 2022-01-18 11:27:02,159 UTC [24125] DEBUG esmvalcore._recipe:1320 Populating list of variables for diagnostic diag_timeseries_surface_average_no_obs 2022-01-18 11:27:02,159 UTC [24125] DEBUG esmvalcore._recipe:1450 Setting script for diagnostic diag_timeseries_surface_average_no_obs 2022-01-18 11:27:02,159 UTC [24125] DEBUG esmvalcore._recipe:1320 Populating list of variables for diagnostic diag_timeseries_surface_average_vs_WOA 2022-01-18 11:27:02,160 UTC [24125] DEBUG esmvalcore._recipe:1450 Setting script for diagnostic diag_timeseries_surface_average_vs_WOA 2022-01-18 11:27:02,161 UTC [24125] DEBUG esmvalcore._recipe:1320 Populating list of variables for diagnostic diag_timeseries_scalars 2022-01-18 11:27:02,161 UTC [24125] DEBUG esmvalcore._recipe:1450 Setting script for diagnostic diag_timeseries_scalars 2022-01-18 11:27:02,161 UTC [24125] DEBUG esmvalcore._recipe:1320 Populating list of variables for diagnostic diag_profile_vs_WOA 2022-01-18 11:27:02,162 UTC [24125] DEBUG esmvalcore._recipe:1450 Setting script for diagnostic diag_profile_vs_WOA 2022-01-18 11:27:02,162 UTC [24125] DEBUG esmvalcore._recipe:1320 Populating list of variables for diagnostic diag_profile_no_obs 2022-01-18 11:27:02,162 UTC [24125] DEBUG esmvalcore._recipe:1450 Setting script for diagnostic diag_profile_no_obs 2022-01-18 11:27:02,162 UTC [24125] DEBUG esmvalcore._recipe:1320 Populating list of variables for diagnostic diag_surface_maps_vs_WOA 2022-01-18 11:27:02,163 UTC [24125] DEBUG esmvalcore._recipe:1450 Setting script for diagnostic diag_surface_maps_vs_WOA 2022-01-18 11:27:02,163 UTC [24125] DEBUG esmvalcore._recipe:1320 Populating list of variables for diagnostic diag_surface_maps_no_data 2022-01-18 11:27:02,164 UTC [24125] DEBUG esmvalcore._recipe:1450 Setting script for diagnostic diag_surface_maps_no_data 2022-01-18 11:27:02,164 UTC [24125] DEBUG esmvalcore._recipe:1320 Populating list of variables for diagnostic diag_transect_vs_WOA 2022-01-18 11:27:02,165 UTC [24125] DEBUG esmvalcore._recipe:1450 Setting script for diagnostic diag_transect_vs_WOA 2022-01-18 11:27:02,165 UTC [24125] DEBUG esmvalcore._recipe:1320 Populating list of variables for diagnostic diag_transect_no_data 2022-01-18 11:27:02,166 UTC [24125] DEBUG esmvalcore._recipe:1450 Setting script for diagnostic diag_transect_no_data 2022-01-18 11:27:02,166 UTC [24125] INFO esmvalcore._recipe:1602 Creating tasks from recipe 2022-01-18 11:27:02,166 UTC [24125] INFO esmvalcore._recipe:1608 Creating tasks for diagnostic diag_timeseries_volume_average_vs_WOA 2022-01-18 11:27:02,166 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_timeseries_volume_average_vs_WOA/thetao 2022-01-18 11:27:02,166 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_timeseries_global_volume_average' task for variable 'thetao' 2022-01-18 11:27:02,169 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'volcello', found table 'fx' 2022-01-18 11:27:02,170 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['volcello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello'] 2022-01-18 11:27:02,171 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'volcello': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,171 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable thetao during step volume_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,172 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['thetao_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao'] 2022-01-18 11:27:02,175 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable thetao of dataset CMIP5: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2022-01-18 11:27:02,175 UTC [24125] INFO esmvalcore._recipe:630 Found input files for CMIP5 2022-01-18 11:27:02,183 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'volcello', found table 'fx' 2022-01-18 11:27:02,184 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_fx_volcello[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,185 UTC [24125] WARNING esmvalcore._recipe:442 Missing data for fx variable 'volcello' of dataset OBS 2022-01-18 11:27:02,185 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_thetao[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,186 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable thetao of dataset OBS: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2022-01-18 11:27:02,186 UTC [24125] INFO esmvalcore._recipe:630 Found input files for OBS 2022-01-18 11:27:02,196 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_timeseries_volume_average_vs_WOA/thetao created. 2022-01-18 11:27:02,196 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_timeseries_volume_average_vs_WOA/thetao will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2022-01-18 11:27:02,197 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_timeseries_volume_average_vs_WOA/so 2022-01-18 11:27:02,197 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_timeseries_global_volume_average' task for variable 'so' 2022-01-18 11:27:02,197 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'volcello', found table 'fx' 2022-01-18 11:27:02,198 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['volcello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello'] 2022-01-18 11:27:02,199 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'volcello': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,199 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable so during step volume_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,200 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['so_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so'] 2022-01-18 11:27:02,201 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable so of dataset CMIP5: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2022-01-18 11:27:02,201 UTC [24125] INFO esmvalcore._recipe:630 Found input files for CMIP5 2022-01-18 11:27:02,205 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'volcello', found table 'fx' 2022-01-18 11:27:02,205 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_fx_volcello[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,206 UTC [24125] WARNING esmvalcore._recipe:442 Missing data for fx variable 'volcello' of dataset OBS 2022-01-18 11:27:02,206 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_so[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,208 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable so of dataset OBS: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2022-01-18 11:27:02,208 UTC [24125] INFO esmvalcore._recipe:630 Found input files for OBS 2022-01-18 11:27:02,216 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_timeseries_volume_average_vs_WOA/so created. 2022-01-18 11:27:02,216 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_timeseries_volume_average_vs_WOA/so will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2022-01-18 11:27:02,217 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_timeseries_volume_average_vs_WOA/no3 2022-01-18 11:27:02,217 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_timeseries_global_volume_average' task for variable 'no3' 2022-01-18 11:27:02,218 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'volcello', found table 'fx' 2022-01-18 11:27:02,219 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['volcello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello'] 2022-01-18 11:27:02,219 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'volcello': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,219 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable no3 during step volume_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,220 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['no3_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3'] 2022-01-18 11:27:02,221 UTC [24125] DEBUG esmvalcore.esgf._search:79 Searching for datasets on ESGF using facets={'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'no3'} 2022-01-18 11:27:02,238 UTC [24125] DEBUG esmvalcore.esgf._search:99 Found the following files matching facets {'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'no3'}: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1860-1959.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,238 UTC [24125] DEBUG esmvalcore.esgf._search:249 Selected files: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,238 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable no3 of dataset CMIP5: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:02,238 UTC [24125] INFO esmvalcore._recipe:630 Found input files for CMIP5 2022-01-18 11:27:02,243 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'volcello', found table 'fx' 2022-01-18 11:27:02,243 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_fx_volcello[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,244 UTC [24125] WARNING esmvalcore._recipe:442 Missing data for fx variable 'volcello' of dataset OBS 2022-01-18 11:27:02,244 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_no3[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,245 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable no3 of dataset OBS: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2022-01-18 11:27:02,245 UTC [24125] INFO esmvalcore._recipe:630 Found input files for OBS 2022-01-18 11:27:02,254 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_timeseries_volume_average_vs_WOA/no3 created. 2022-01-18 11:27:02,254 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_timeseries_volume_average_vs_WOA/no3 will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2022-01-18 11:27:02,255 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_timeseries_volume_average_vs_WOA/o2 2022-01-18 11:27:02,255 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_timeseries_global_volume_average' task for variable 'o2' 2022-01-18 11:27:02,255 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'volcello', found table 'fx' 2022-01-18 11:27:02,256 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['volcello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello'] 2022-01-18 11:27:02,257 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'volcello': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,257 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable o2 during step volume_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,258 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['o2_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2'] 2022-01-18 11:27:02,259 UTC [24125] DEBUG esmvalcore.esgf._search:79 Searching for datasets on ESGF using facets={'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'o2'} 2022-01-18 11:27:02,274 UTC [24125] DEBUG esmvalcore.esgf._search:99 Found the following files matching facets {'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'o2'}: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1860-1959.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,274 UTC [24125] DEBUG esmvalcore.esgf._search:249 Selected files: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,274 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable o2 of dataset CMIP5: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:02,274 UTC [24125] INFO esmvalcore._recipe:630 Found input files for CMIP5 2022-01-18 11:27:02,278 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'volcello', found table 'fx' 2022-01-18 11:27:02,279 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_fx_volcello[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,279 UTC [24125] WARNING esmvalcore._recipe:442 Missing data for fx variable 'volcello' of dataset OBS 2022-01-18 11:27:02,280 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_o2[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,281 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable o2 of dataset OBS: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2022-01-18 11:27:02,281 UTC [24125] INFO esmvalcore._recipe:630 Found input files for OBS 2022-01-18 11:27:02,290 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_timeseries_volume_average_vs_WOA/o2 created. 2022-01-18 11:27:02,290 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_timeseries_volume_average_vs_WOA/o2 will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2022-01-18 11:27:02,290 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_timeseries_volume_average_vs_WOA/si 2022-01-18 11:27:02,291 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_timeseries_global_volume_average' task for variable 'si' 2022-01-18 11:27:02,291 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'volcello', found table 'fx' 2022-01-18 11:27:02,292 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['volcello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello'] 2022-01-18 11:27:02,293 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'volcello': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,293 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable si during step volume_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,294 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['si_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si'] 2022-01-18 11:27:02,295 UTC [24125] DEBUG esmvalcore.esgf._search:79 Searching for datasets on ESGF using facets={'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'si'} 2022-01-18 11:27:02,309 UTC [24125] DEBUG esmvalcore.esgf._search:99 Found the following files matching facets {'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'si'}: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si_Oyr_HadGEM2-ES_historical_r1i1p1_1860-1959.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,309 UTC [24125] DEBUG esmvalcore.esgf._search:249 Selected files: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,310 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable si of dataset CMIP5: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:02,310 UTC [24125] INFO esmvalcore._recipe:630 Found input files for CMIP5 2022-01-18 11:27:02,314 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'volcello', found table 'fx' 2022-01-18 11:27:02,314 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_fx_volcello[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,315 UTC [24125] WARNING esmvalcore._recipe:442 Missing data for fx variable 'volcello' of dataset OBS 2022-01-18 11:27:02,315 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_si[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,316 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable si of dataset OBS: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2022-01-18 11:27:02,316 UTC [24125] INFO esmvalcore._recipe:630 Found input files for OBS 2022-01-18 11:27:02,325 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_timeseries_volume_average_vs_WOA/si created. 2022-01-18 11:27:02,325 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_timeseries_volume_average_vs_WOA/si will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2022-01-18 11:27:02,326 UTC [24125] INFO esmvalcore._recipe:1624 Creating diagnostic task diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries 2022-01-18 11:27:02,326 UTC [24125] INFO esmvalcore._recipe:1608 Creating tasks for diagnostic diag_timeseries_volume_average_no_obs 2022-01-18 11:27:02,326 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_timeseries_volume_average_no_obs/chl 2022-01-18 11:27:02,326 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_timeseries_global_volume_average' task for variable 'chl' 2022-01-18 11:27:02,327 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'volcello', found table 'fx' 2022-01-18 11:27:02,328 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['volcello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello'] 2022-01-18 11:27:02,328 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'volcello': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,329 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable chl during step volume_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,329 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['chl_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl'] 2022-01-18 11:27:02,330 UTC [24125] DEBUG esmvalcore.esgf._search:79 Searching for datasets on ESGF using facets={'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'chl'} 2022-01-18 11:27:02,345 UTC [24125] DEBUG esmvalcore.esgf._search:99 Found the following files matching facets {'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'chl'}: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1860-1959.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,345 UTC [24125] DEBUG esmvalcore.esgf._search:249 Selected files: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,346 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable chl of dataset HadGEM2-ES: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:02,346 UTC [24125] INFO esmvalcore._recipe:630 Found input files for HadGEM2-ES 2022-01-18 11:27:02,350 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_timeseries_volume_average_no_obs/chl created. 2022-01-18 11:27:02,351 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_timeseries_volume_average_no_obs/chl will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2022-01-18 11:27:02,351 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_timeseries_volume_average_no_obs/dfe 2022-01-18 11:27:02,351 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_timeseries_global_volume_average' task for variable 'dfe' 2022-01-18 11:27:02,352 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'volcello', found table 'fx' 2022-01-18 11:27:02,352 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['volcello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello'] 2022-01-18 11:27:02,353 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'volcello': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,353 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable dfe during step volume_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,354 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['dfe_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe'] 2022-01-18 11:27:02,355 UTC [24125] DEBUG esmvalcore.esgf._search:79 Searching for datasets on ESGF using facets={'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'dfe'} 2022-01-18 11:27:02,371 UTC [24125] DEBUG esmvalcore.esgf._search:99 Found the following files matching facets {'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'dfe'}: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1860-1959.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,371 UTC [24125] DEBUG esmvalcore.esgf._search:249 Selected files: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,371 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable dfe of dataset HadGEM2-ES: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:02,371 UTC [24125] INFO esmvalcore._recipe:630 Found input files for HadGEM2-ES 2022-01-18 11:27:02,376 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_timeseries_volume_average_no_obs/dfe created. 2022-01-18 11:27:02,376 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_timeseries_volume_average_no_obs/dfe will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2022-01-18 11:27:02,376 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_timeseries_volume_average_no_obs/talk 2022-01-18 11:27:02,377 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_timeseries_global_volume_average' task for variable 'talk' 2022-01-18 11:27:02,377 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'volcello', found table 'fx' 2022-01-18 11:27:02,378 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['volcello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello'] 2022-01-18 11:27:02,379 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'volcello': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,379 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable talk during step volume_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,380 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['talk_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk'] 2022-01-18 11:27:02,380 UTC [24125] DEBUG esmvalcore.esgf._search:79 Searching for datasets on ESGF using facets={'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'talk'} 2022-01-18 11:27:02,396 UTC [24125] DEBUG esmvalcore.esgf._search:99 Found the following files matching facets {'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'talk'}: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1860-1959.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,396 UTC [24125] DEBUG esmvalcore.esgf._search:249 Selected files: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,396 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable talk of dataset HadGEM2-ES: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:02,396 UTC [24125] INFO esmvalcore._recipe:630 Found input files for HadGEM2-ES 2022-01-18 11:27:02,401 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_timeseries_volume_average_no_obs/talk created. 2022-01-18 11:27:02,401 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_timeseries_volume_average_no_obs/talk will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc 2022-01-18 11:27:02,401 UTC [24125] INFO esmvalcore._recipe:1624 Creating diagnostic task diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries 2022-01-18 11:27:02,402 UTC [24125] INFO esmvalcore._recipe:1608 Creating tasks for diagnostic diag_timeseries_surface_average_no_obs 2022-01-18 11:27:02,402 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_timeseries_surface_average_no_obs/talk 2022-01-18 11:27:02,402 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_global_Surface_average_timeseries_3D' task for variable 'talk' 2022-01-18 11:27:02,403 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacella', found table 'fx' 2022-01-18 11:27:02,403 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2022-01-18 11:27:02,404 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'areacella': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,405 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable talk during step area_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,405 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacello', found table 'fx' 2022-01-18 11:27:02,406 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2022-01-18 11:27:02,406 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'areacello': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,407 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable talk during step area_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,407 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['talk_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk'] 2022-01-18 11:27:02,408 UTC [24125] DEBUG esmvalcore.esgf._search:79 Searching for datasets on ESGF using facets={'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'talk'} 2022-01-18 11:27:02,424 UTC [24125] DEBUG esmvalcore.esgf._search:99 Found the following files matching facets {'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'talk'}: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1860-1959.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,424 UTC [24125] DEBUG esmvalcore.esgf._search:249 Selected files: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,424 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable talk of dataset HadGEM2-ES: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:02,424 UTC [24125] INFO esmvalcore._recipe:630 Found input files for HadGEM2-ES 2022-01-18 11:27:02,429 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_timeseries_surface_average_no_obs/talk created. 2022-01-18 11:27:02,429 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_timeseries_surface_average_no_obs/talk will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc 2022-01-18 11:27:02,429 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_timeseries_surface_average_no_obs/intpp 2022-01-18 11:27:02,429 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_global_Surface_average_timeseries_2D' task for variable 'intpp' 2022-01-18 11:27:02,430 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacella', found table 'fx' 2022-01-18 11:27:02,431 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2022-01-18 11:27:02,431 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'areacella': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,431 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable intpp during step area_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,432 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacello', found table 'fx' 2022-01-18 11:27:02,432 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2022-01-18 11:27:02,433 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'areacello': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,433 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable intpp during step area_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,434 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['intpp_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp'] 2022-01-18 11:27:02,435 UTC [24125] DEBUG esmvalcore.esgf._search:79 Searching for datasets on ESGF using facets={'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Omon', 'product': 'output1', 'variable': 'intpp'} 2022-01-18 11:27:02,450 UTC [24125] DEBUG esmvalcore.esgf._search:99 Found the following files matching facets {'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Omon', 'product': 'output1', 'variable': 'intpp'}: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp_Omon_HadGEM2-ES_historical_r1i1p1_185912-195911.nc on hosts ['aims3.llnl.gov', 'esgf-data1.ceda.ac.uk', 'esgf.nci.org.au', 'esgf2.dkrz.de'] ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc on hosts ['aims3.llnl.gov', 'esgf-data1.ceda.ac.uk', 'esgf.nci.org.au', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,450 UTC [24125] DEBUG esmvalcore.esgf._search:249 Selected files: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc on hosts ['aims3.llnl.gov', 'esgf-data1.ceda.ac.uk', 'esgf.nci.org.au', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,450 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable intpp of dataset HadGEM2-ES: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc 2022-01-18 11:27:02,451 UTC [24125] INFO esmvalcore._recipe:630 Found input files for HadGEM2-ES 2022-01-18 11:27:02,455 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_timeseries_surface_average_no_obs/intpp created. 2022-01-18 11:27:02,455 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_timeseries_surface_average_no_obs/intpp will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc 2022-01-18 11:27:02,456 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_timeseries_surface_average_no_obs/chl 2022-01-18 11:27:02,456 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_global_Surface_average_timeseries_3D' task for variable 'chl' 2022-01-18 11:27:02,456 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacella', found table 'fx' 2022-01-18 11:27:02,457 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2022-01-18 11:27:02,458 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'areacella': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,458 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable chl during step area_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,458 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacello', found table 'fx' 2022-01-18 11:27:02,459 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2022-01-18 11:27:02,460 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'areacello': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,460 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable chl during step area_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,461 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['chl_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl'] 2022-01-18 11:27:02,462 UTC [24125] DEBUG esmvalcore.esgf._search:79 Searching for datasets on ESGF using facets={'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'chl'} 2022-01-18 11:27:02,477 UTC [24125] DEBUG esmvalcore.esgf._search:99 Found the following files matching facets {'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'chl'}: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1860-1959.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,477 UTC [24125] DEBUG esmvalcore.esgf._search:249 Selected files: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,477 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable chl of dataset HadGEM2-ES: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:02,477 UTC [24125] INFO esmvalcore._recipe:630 Found input files for HadGEM2-ES 2022-01-18 11:27:02,482 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_timeseries_surface_average_no_obs/chl created. 2022-01-18 11:27:02,482 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_timeseries_surface_average_no_obs/chl will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2022-01-18 11:27:02,483 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_timeseries_surface_average_no_obs/areacello 2022-01-18 11:27:02,483 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'default' task for variable 'areacello' 2022-01-18 11:27:02,484 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2022-01-18 11:27:02,485 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable areacello of dataset HadGEM2-ES: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2022-01-18 11:27:02,485 UTC [24125] INFO esmvalcore._recipe:630 Found input files for HadGEM2-ES 2022-01-18 11:27:02,488 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_timeseries_surface_average_no_obs/areacello created. 2022-01-18 11:27:02,488 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_timeseries_surface_average_no_obs/areacello will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2022-01-18 11:27:02,488 UTC [24125] INFO esmvalcore._recipe:1624 Creating diagnostic task diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries 2022-01-18 11:27:02,489 UTC [24125] INFO esmvalcore._recipe:1608 Creating tasks for diagnostic diag_timeseries_surface_average_vs_WOA 2022-01-18 11:27:02,489 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_timeseries_surface_average_vs_WOA/thetao 2022-01-18 11:27:02,489 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_global_Surface_average_timeseries_3D' task for variable 'thetao' 2022-01-18 11:27:02,489 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacella', found table 'fx' 2022-01-18 11:27:02,490 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2022-01-18 11:27:02,491 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'areacella': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,491 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable thetao during step area_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,491 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacello', found table 'fx' 2022-01-18 11:27:02,492 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2022-01-18 11:27:02,493 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'areacello': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,493 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable thetao during step area_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,494 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['thetao_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao'] 2022-01-18 11:27:02,495 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable thetao of dataset CMIP5: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2022-01-18 11:27:02,495 UTC [24125] INFO esmvalcore._recipe:630 Found input files for CMIP5 2022-01-18 11:27:02,499 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacella', found table 'fx' 2022-01-18 11:27:02,499 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacella[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,500 UTC [24125] WARNING esmvalcore._recipe:442 Missing data for fx variable 'areacella' of dataset OBS 2022-01-18 11:27:02,500 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacello', found table 'fx' 2022-01-18 11:27:02,501 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacello[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,502 UTC [24125] WARNING esmvalcore._recipe:442 Missing data for fx variable 'areacello' of dataset OBS 2022-01-18 11:27:02,502 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_thetao[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,502 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable thetao of dataset OBS: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2022-01-18 11:27:02,503 UTC [24125] INFO esmvalcore._recipe:630 Found input files for OBS 2022-01-18 11:27:02,512 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_timeseries_surface_average_vs_WOA/thetao created. 2022-01-18 11:27:02,512 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_timeseries_surface_average_vs_WOA/thetao will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2022-01-18 11:27:02,512 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_timeseries_surface_average_vs_WOA/so 2022-01-18 11:27:02,513 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_global_Surface_average_timeseries_3D' task for variable 'so' 2022-01-18 11:27:02,513 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacella', found table 'fx' 2022-01-18 11:27:02,514 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2022-01-18 11:27:02,515 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'areacella': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,515 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable so during step area_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,515 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacello', found table 'fx' 2022-01-18 11:27:02,516 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2022-01-18 11:27:02,517 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'areacello': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,517 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable so during step area_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,518 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['so_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so'] 2022-01-18 11:27:02,519 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable so of dataset CMIP5: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2022-01-18 11:27:02,519 UTC [24125] INFO esmvalcore._recipe:630 Found input files for CMIP5 2022-01-18 11:27:02,523 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacella', found table 'fx' 2022-01-18 11:27:02,523 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacella[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,524 UTC [24125] WARNING esmvalcore._recipe:442 Missing data for fx variable 'areacella' of dataset OBS 2022-01-18 11:27:02,524 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacello', found table 'fx' 2022-01-18 11:27:02,524 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacello[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,525 UTC [24125] WARNING esmvalcore._recipe:442 Missing data for fx variable 'areacello' of dataset OBS 2022-01-18 11:27:02,525 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_so[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,526 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable so of dataset OBS: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2022-01-18 11:27:02,526 UTC [24125] INFO esmvalcore._recipe:630 Found input files for OBS 2022-01-18 11:27:02,535 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_timeseries_surface_average_vs_WOA/so created. 2022-01-18 11:27:02,535 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_timeseries_surface_average_vs_WOA/so will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2022-01-18 11:27:02,536 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_timeseries_surface_average_vs_WOA/no3 2022-01-18 11:27:02,536 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_global_Surface_average_timeseries_3D' task for variable 'no3' 2022-01-18 11:27:02,536 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacella', found table 'fx' 2022-01-18 11:27:02,537 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2022-01-18 11:27:02,538 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'areacella': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,538 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable no3 during step area_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,538 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacello', found table 'fx' 2022-01-18 11:27:02,539 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2022-01-18 11:27:02,540 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'areacello': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,540 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable no3 during step area_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,541 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['no3_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3'] 2022-01-18 11:27:02,541 UTC [24125] DEBUG esmvalcore.esgf._search:79 Searching for datasets on ESGF using facets={'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'no3'} 2022-01-18 11:27:02,557 UTC [24125] DEBUG esmvalcore.esgf._search:99 Found the following files matching facets {'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'no3'}: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1860-1959.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,557 UTC [24125] DEBUG esmvalcore.esgf._search:249 Selected files: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,557 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable no3 of dataset CMIP5: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:02,557 UTC [24125] INFO esmvalcore._recipe:630 Found input files for CMIP5 2022-01-18 11:27:02,561 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacella', found table 'fx' 2022-01-18 11:27:02,562 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacella[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,562 UTC [24125] WARNING esmvalcore._recipe:442 Missing data for fx variable 'areacella' of dataset OBS 2022-01-18 11:27:02,562 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacello', found table 'fx' 2022-01-18 11:27:02,562 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacello[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,563 UTC [24125] WARNING esmvalcore._recipe:442 Missing data for fx variable 'areacello' of dataset OBS 2022-01-18 11:27:02,563 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_no3[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,564 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable no3 of dataset OBS: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2022-01-18 11:27:02,564 UTC [24125] INFO esmvalcore._recipe:630 Found input files for OBS 2022-01-18 11:27:02,573 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_timeseries_surface_average_vs_WOA/no3 created. 2022-01-18 11:27:02,573 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_timeseries_surface_average_vs_WOA/no3 will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2022-01-18 11:27:02,574 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_timeseries_surface_average_vs_WOA/o2 2022-01-18 11:27:02,574 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_global_Surface_average_timeseries_3D' task for variable 'o2' 2022-01-18 11:27:02,574 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacella', found table 'fx' 2022-01-18 11:27:02,575 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2022-01-18 11:27:02,576 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'areacella': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,576 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable o2 during step area_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,577 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacello', found table 'fx' 2022-01-18 11:27:02,577 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2022-01-18 11:27:02,578 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'areacello': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,578 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable o2 during step area_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,579 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['o2_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2'] 2022-01-18 11:27:02,580 UTC [24125] DEBUG esmvalcore.esgf._search:79 Searching for datasets on ESGF using facets={'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'o2'} 2022-01-18 11:27:02,596 UTC [24125] DEBUG esmvalcore.esgf._search:99 Found the following files matching facets {'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'o2'}: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1860-1959.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,596 UTC [24125] DEBUG esmvalcore.esgf._search:249 Selected files: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,596 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable o2 of dataset CMIP5: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:02,597 UTC [24125] INFO esmvalcore._recipe:630 Found input files for CMIP5 2022-01-18 11:27:02,601 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacella', found table 'fx' 2022-01-18 11:27:02,601 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacella[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,601 UTC [24125] WARNING esmvalcore._recipe:442 Missing data for fx variable 'areacella' of dataset OBS 2022-01-18 11:27:02,601 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacello', found table 'fx' 2022-01-18 11:27:02,602 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacello[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,602 UTC [24125] WARNING esmvalcore._recipe:442 Missing data for fx variable 'areacello' of dataset OBS 2022-01-18 11:27:02,603 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_o2[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,603 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable o2 of dataset OBS: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2022-01-18 11:27:02,603 UTC [24125] INFO esmvalcore._recipe:630 Found input files for OBS 2022-01-18 11:27:02,612 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_timeseries_surface_average_vs_WOA/o2 created. 2022-01-18 11:27:02,613 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_timeseries_surface_average_vs_WOA/o2 will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2022-01-18 11:27:02,613 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_timeseries_surface_average_vs_WOA/si 2022-01-18 11:27:02,613 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_global_Surface_average_timeseries_3D' task for variable 'si' 2022-01-18 11:27:02,614 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacella', found table 'fx' 2022-01-18 11:27:02,615 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2022-01-18 11:27:02,615 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'areacella': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,615 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable si during step area_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,616 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacello', found table 'fx' 2022-01-18 11:27:02,616 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2022-01-18 11:27:02,617 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'areacello': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,617 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable si during step area_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,618 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['si_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si'] 2022-01-18 11:27:02,619 UTC [24125] DEBUG esmvalcore.esgf._search:79 Searching for datasets on ESGF using facets={'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'si'} 2022-01-18 11:27:02,634 UTC [24125] DEBUG esmvalcore.esgf._search:99 Found the following files matching facets {'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'si'}: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si_Oyr_HadGEM2-ES_historical_r1i1p1_1860-1959.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,634 UTC [24125] DEBUG esmvalcore.esgf._search:249 Selected files: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,634 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable si of dataset CMIP5: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:02,635 UTC [24125] INFO esmvalcore._recipe:630 Found input files for CMIP5 2022-01-18 11:27:02,639 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacella', found table 'fx' 2022-01-18 11:27:02,639 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacella[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,639 UTC [24125] WARNING esmvalcore._recipe:442 Missing data for fx variable 'areacella' of dataset OBS 2022-01-18 11:27:02,640 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacello', found table 'fx' 2022-01-18 11:27:02,640 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacello[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,640 UTC [24125] WARNING esmvalcore._recipe:442 Missing data for fx variable 'areacello' of dataset OBS 2022-01-18 11:27:02,641 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_si[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,641 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable si of dataset OBS: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2022-01-18 11:27:02,642 UTC [24125] INFO esmvalcore._recipe:630 Found input files for OBS 2022-01-18 11:27:02,650 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_timeseries_surface_average_vs_WOA/si created. 2022-01-18 11:27:02,650 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_timeseries_surface_average_vs_WOA/si will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2022-01-18 11:27:02,651 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_timeseries_surface_average_vs_WOA/areacello 2022-01-18 11:27:02,651 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'default' task for variable 'areacello' 2022-01-18 11:27:02,652 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2022-01-18 11:27:02,653 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable areacello of dataset CMIP5: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2022-01-18 11:27:02,653 UTC [24125] INFO esmvalcore._recipe:630 Found input files for CMIP5 2022-01-18 11:27:02,656 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_timeseries_surface_average_vs_WOA/areacello created. 2022-01-18 11:27:02,656 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_timeseries_surface_average_vs_WOA/areacello will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2022-01-18 11:27:02,657 UTC [24125] INFO esmvalcore._recipe:1624 Creating diagnostic task diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries 2022-01-18 11:27:02,657 UTC [24125] INFO esmvalcore._recipe:1608 Creating tasks for diagnostic diag_timeseries_scalars 2022-01-18 11:27:02,657 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_timeseries_scalars/mfo 2022-01-18 11:27:02,657 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_timeseries_scalar' task for variable 'mfo' 2022-01-18 11:27:02,659 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['mfo_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/mfo'] 2022-01-18 11:27:02,659 UTC [24125] DEBUG esmvalcore.esgf._search:79 Searching for datasets on ESGF using facets={'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Omon', 'product': 'output1', 'variable': 'mfo'} 2022-01-18 11:27:02,676 UTC [24125] DEBUG esmvalcore.esgf._search:99 Found the following files matching facets {'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Omon', 'product': 'output1', 'variable': 'mfo'}: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc on hosts ['aims3.llnl.gov', 'esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,676 UTC [24125] DEBUG esmvalcore.esgf._search:249 Selected files: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc on hosts ['aims3.llnl.gov', 'esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,676 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable mfo of dataset HadGEM2-ES: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc 2022-01-18 11:27:02,677 UTC [24125] INFO esmvalcore._recipe:630 Found input files for HadGEM2-ES 2022-01-18 11:27:02,679 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_timeseries_scalars/mfo created. 2022-01-18 11:27:02,679 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_timeseries_scalars/mfo will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc 2022-01-18 11:27:02,680 UTC [24125] INFO esmvalcore._recipe:1624 Creating diagnostic task diag_timeseries_scalars/Scalar_timeseries 2022-01-18 11:27:02,680 UTC [24125] INFO esmvalcore._recipe:1608 Creating tasks for diagnostic diag_profile_vs_WOA 2022-01-18 11:27:02,680 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_profile_vs_WOA/thetao 2022-01-18 11:27:02,680 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_global_profile' task for variable 'thetao' 2022-01-18 11:27:02,681 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacella', found table 'fx' 2022-01-18 11:27:02,682 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2022-01-18 11:27:02,682 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'areacella': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,683 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable thetao during step area_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,683 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacello', found table 'fx' 2022-01-18 11:27:02,684 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2022-01-18 11:27:02,685 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'areacello': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,685 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable thetao during step area_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,686 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['thetao_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao'] 2022-01-18 11:27:02,688 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable thetao of dataset CMIP5: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2022-01-18 11:27:02,688 UTC [24125] INFO esmvalcore._recipe:630 Found input files for CMIP5 2022-01-18 11:27:02,692 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacella', found table 'fx' 2022-01-18 11:27:02,692 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacella[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,693 UTC [24125] WARNING esmvalcore._recipe:442 Missing data for fx variable 'areacella' of dataset OBS 2022-01-18 11:27:02,693 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacello', found table 'fx' 2022-01-18 11:27:02,693 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacello[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,693 UTC [24125] WARNING esmvalcore._recipe:442 Missing data for fx variable 'areacello' of dataset OBS 2022-01-18 11:27:02,694 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_thetao[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,694 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable thetao of dataset OBS: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2022-01-18 11:27:02,695 UTC [24125] INFO esmvalcore._recipe:630 Found input files for OBS 2022-01-18 11:27:02,703 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_profile_vs_WOA/thetao created. 2022-01-18 11:27:02,703 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_profile_vs_WOA/thetao will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2022-01-18 11:27:02,704 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_profile_vs_WOA/so 2022-01-18 11:27:02,704 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_global_profile' task for variable 'so' 2022-01-18 11:27:02,704 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacella', found table 'fx' 2022-01-18 11:27:02,705 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2022-01-18 11:27:02,706 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'areacella': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,706 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable so during step area_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,706 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacello', found table 'fx' 2022-01-18 11:27:02,707 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2022-01-18 11:27:02,708 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'areacello': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,708 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable so during step area_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,709 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['so_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so'] 2022-01-18 11:27:02,710 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable so of dataset CMIP5: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2022-01-18 11:27:02,710 UTC [24125] INFO esmvalcore._recipe:630 Found input files for CMIP5 2022-01-18 11:27:02,714 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacella', found table 'fx' 2022-01-18 11:27:02,714 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacella[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,715 UTC [24125] WARNING esmvalcore._recipe:442 Missing data for fx variable 'areacella' of dataset OBS 2022-01-18 11:27:02,715 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacello', found table 'fx' 2022-01-18 11:27:02,715 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacello[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,716 UTC [24125] WARNING esmvalcore._recipe:442 Missing data for fx variable 'areacello' of dataset OBS 2022-01-18 11:27:02,716 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_so[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,717 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable so of dataset OBS: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2022-01-18 11:27:02,717 UTC [24125] INFO esmvalcore._recipe:630 Found input files for OBS 2022-01-18 11:27:02,725 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_profile_vs_WOA/so created. 2022-01-18 11:27:02,725 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_profile_vs_WOA/so will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2022-01-18 11:27:02,726 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_profile_vs_WOA/no3 2022-01-18 11:27:02,726 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_global_profile' task for variable 'no3' 2022-01-18 11:27:02,726 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacella', found table 'fx' 2022-01-18 11:27:02,757 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2022-01-18 11:27:02,758 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'areacella': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,758 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable no3 during step area_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,758 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacello', found table 'fx' 2022-01-18 11:27:02,759 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2022-01-18 11:27:02,760 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'areacello': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,760 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable no3 during step area_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,761 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['no3_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3'] 2022-01-18 11:27:02,761 UTC [24125] DEBUG esmvalcore.esgf._search:79 Searching for datasets on ESGF using facets={'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'no3'} 2022-01-18 11:27:02,777 UTC [24125] DEBUG esmvalcore.esgf._search:99 Found the following files matching facets {'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'no3'}: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1860-1959.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,777 UTC [24125] DEBUG esmvalcore.esgf._search:249 Selected files: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,777 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable no3 of dataset CMIP5: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:02,777 UTC [24125] INFO esmvalcore._recipe:630 Found input files for CMIP5 2022-01-18 11:27:02,781 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacella', found table 'fx' 2022-01-18 11:27:02,781 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacella[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,782 UTC [24125] WARNING esmvalcore._recipe:442 Missing data for fx variable 'areacella' of dataset OBS 2022-01-18 11:27:02,782 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacello', found table 'fx' 2022-01-18 11:27:02,782 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacello[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,783 UTC [24125] WARNING esmvalcore._recipe:442 Missing data for fx variable 'areacello' of dataset OBS 2022-01-18 11:27:02,783 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_no3[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,784 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable no3 of dataset OBS: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2022-01-18 11:27:02,784 UTC [24125] INFO esmvalcore._recipe:630 Found input files for OBS 2022-01-18 11:27:02,793 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_profile_vs_WOA/no3 created. 2022-01-18 11:27:02,793 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_profile_vs_WOA/no3 will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2022-01-18 11:27:02,793 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_profile_vs_WOA/o2 2022-01-18 11:27:02,793 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_global_profile' task for variable 'o2' 2022-01-18 11:27:02,794 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacella', found table 'fx' 2022-01-18 11:27:02,795 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2022-01-18 11:27:02,795 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'areacella': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,796 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable o2 during step area_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,796 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacello', found table 'fx' 2022-01-18 11:27:02,797 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2022-01-18 11:27:02,797 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'areacello': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,798 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable o2 during step area_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,799 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['o2_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2'] 2022-01-18 11:27:02,799 UTC [24125] DEBUG esmvalcore.esgf._search:79 Searching for datasets on ESGF using facets={'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'o2'} 2022-01-18 11:27:02,882 UTC [24125] DEBUG esmvalcore.esgf._search:99 Found the following files matching facets {'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'o2'}: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1860-1959.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,882 UTC [24125] DEBUG esmvalcore.esgf._search:249 Selected files: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,882 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable o2 of dataset CMIP5: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:02,882 UTC [24125] INFO esmvalcore._recipe:630 Found input files for CMIP5 2022-01-18 11:27:02,887 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacella', found table 'fx' 2022-01-18 11:27:02,887 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacella[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,888 UTC [24125] WARNING esmvalcore._recipe:442 Missing data for fx variable 'areacella' of dataset OBS 2022-01-18 11:27:02,888 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacello', found table 'fx' 2022-01-18 11:27:02,888 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacello[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,889 UTC [24125] WARNING esmvalcore._recipe:442 Missing data for fx variable 'areacello' of dataset OBS 2022-01-18 11:27:02,889 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_o2[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,890 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable o2 of dataset OBS: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2022-01-18 11:27:02,890 UTC [24125] INFO esmvalcore._recipe:630 Found input files for OBS 2022-01-18 11:27:02,899 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_profile_vs_WOA/o2 created. 2022-01-18 11:27:02,899 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_profile_vs_WOA/o2 will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2022-01-18 11:27:02,899 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_profile_vs_WOA/si 2022-01-18 11:27:02,899 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_global_profile' task for variable 'si' 2022-01-18 11:27:02,900 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacella', found table 'fx' 2022-01-18 11:27:02,901 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2022-01-18 11:27:02,902 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'areacella': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,902 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable si during step area_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,902 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacello', found table 'fx' 2022-01-18 11:27:02,903 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2022-01-18 11:27:02,904 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'areacello': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,904 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable si during step area_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,905 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['si_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si'] 2022-01-18 11:27:02,905 UTC [24125] DEBUG esmvalcore.esgf._search:79 Searching for datasets on ESGF using facets={'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'si'} 2022-01-18 11:27:02,921 UTC [24125] DEBUG esmvalcore.esgf._search:99 Found the following files matching facets {'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'si'}: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si_Oyr_HadGEM2-ES_historical_r1i1p1_1860-1959.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,921 UTC [24125] DEBUG esmvalcore.esgf._search:249 Selected files: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,921 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable si of dataset CMIP5: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:02,921 UTC [24125] INFO esmvalcore._recipe:630 Found input files for CMIP5 2022-01-18 11:27:02,925 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacella', found table 'fx' 2022-01-18 11:27:02,926 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacella[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,926 UTC [24125] WARNING esmvalcore._recipe:442 Missing data for fx variable 'areacella' of dataset OBS 2022-01-18 11:27:02,927 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacello', found table 'fx' 2022-01-18 11:27:02,927 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacello[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,927 UTC [24125] WARNING esmvalcore._recipe:442 Missing data for fx variable 'areacello' of dataset OBS 2022-01-18 11:27:02,928 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_si[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:02,928 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable si of dataset OBS: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2022-01-18 11:27:02,928 UTC [24125] INFO esmvalcore._recipe:630 Found input files for OBS 2022-01-18 11:27:02,937 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_profile_vs_WOA/si created. 2022-01-18 11:27:02,937 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_profile_vs_WOA/si will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2022-01-18 11:27:02,938 UTC [24125] INFO esmvalcore._recipe:1624 Creating diagnostic task diag_profile_vs_WOA/Global_profile_vs_WOA 2022-01-18 11:27:02,938 UTC [24125] INFO esmvalcore._recipe:1608 Creating tasks for diagnostic diag_profile_no_obs 2022-01-18 11:27:02,938 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_profile_no_obs/chl 2022-01-18 11:27:02,938 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_global_profile' task for variable 'chl' 2022-01-18 11:27:02,939 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacella', found table 'fx' 2022-01-18 11:27:02,940 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2022-01-18 11:27:02,940 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'areacella': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,940 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable chl during step area_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,941 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacello', found table 'fx' 2022-01-18 11:27:02,942 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2022-01-18 11:27:02,943 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'areacello': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,943 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable chl during step area_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,944 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['chl_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl'] 2022-01-18 11:27:02,945 UTC [24125] DEBUG esmvalcore.esgf._search:79 Searching for datasets on ESGF using facets={'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'chl'} 2022-01-18 11:27:02,960 UTC [24125] DEBUG esmvalcore.esgf._search:99 Found the following files matching facets {'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'chl'}: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1860-1959.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,961 UTC [24125] DEBUG esmvalcore.esgf._search:249 Selected files: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,961 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable chl of dataset HadGEM2-ES: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:02,961 UTC [24125] INFO esmvalcore._recipe:630 Found input files for HadGEM2-ES 2022-01-18 11:27:02,966 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_profile_no_obs/chl created. 2022-01-18 11:27:02,967 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_profile_no_obs/chl will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2022-01-18 11:27:02,967 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_profile_no_obs/dfe 2022-01-18 11:27:02,967 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_global_profile' task for variable 'dfe' 2022-01-18 11:27:02,968 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacella', found table 'fx' 2022-01-18 11:27:02,969 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2022-01-18 11:27:02,970 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'areacella': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,970 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable dfe during step area_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,970 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacello', found table 'fx' 2022-01-18 11:27:02,971 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2022-01-18 11:27:02,972 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'areacello': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,972 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable dfe during step area_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,973 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['dfe_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe'] 2022-01-18 11:27:02,974 UTC [24125] DEBUG esmvalcore.esgf._search:79 Searching for datasets on ESGF using facets={'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'dfe'} 2022-01-18 11:27:02,989 UTC [24125] DEBUG esmvalcore.esgf._search:99 Found the following files matching facets {'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'dfe'}: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1860-1959.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,989 UTC [24125] DEBUG esmvalcore.esgf._search:249 Selected files: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:02,989 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable dfe of dataset HadGEM2-ES: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:02,990 UTC [24125] INFO esmvalcore._recipe:630 Found input files for HadGEM2-ES 2022-01-18 11:27:02,995 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_profile_no_obs/dfe created. 2022-01-18 11:27:02,995 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_profile_no_obs/dfe will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2022-01-18 11:27:02,996 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_profile_no_obs/talk 2022-01-18 11:27:02,996 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_global_profile' task for variable 'talk' 2022-01-18 11:27:02,996 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacella', found table 'fx' 2022-01-18 11:27:02,997 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2022-01-18 11:27:02,998 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'areacella': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:02,998 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable talk during step area_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:02,998 UTC [24125] DEBUG esmvalcore._recipe:375 For fx variable 'areacello', found table 'fx' 2022-01-18 11:27:02,999 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2022-01-18 11:27:03,000 UTC [24125] DEBUG esmvalcore._recipe:379 Found fx variables 'areacello': ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2022-01-18 11:27:03,000 UTC [24125] DEBUG esmvalcore._recipe:489 Using fx files for variable talk during step area_statistics: '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2022-01-18 11:27:03,001 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['talk_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk'] 2022-01-18 11:27:03,002 UTC [24125] DEBUG esmvalcore.esgf._search:79 Searching for datasets on ESGF using facets={'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'talk'} 2022-01-18 11:27:03,017 UTC [24125] DEBUG esmvalcore.esgf._search:99 Found the following files matching facets {'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'talk'}: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1860-1959.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:03,017 UTC [24125] DEBUG esmvalcore.esgf._search:249 Selected files: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:03,017 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable talk of dataset HadGEM2-ES: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:03,017 UTC [24125] INFO esmvalcore._recipe:630 Found input files for HadGEM2-ES 2022-01-18 11:27:03,023 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_profile_no_obs/talk created. 2022-01-18 11:27:03,023 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_profile_no_obs/talk will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc 2022-01-18 11:27:03,024 UTC [24125] INFO esmvalcore._recipe:1624 Creating diagnostic task diag_profile_no_obs/Global_profile_no_obs 2022-01-18 11:27:03,024 UTC [24125] INFO esmvalcore._recipe:1608 Creating tasks for diagnostic diag_surface_maps_vs_WOA 2022-01-18 11:27:03,024 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_surface_maps_vs_WOA/thetao 2022-01-18 11:27:03,024 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_surface_map_regrid_3D' task for variable 'thetao' 2022-01-18 11:27:03,026 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['thetao_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao'] 2022-01-18 11:27:03,027 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable thetao of dataset CMIP5: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2022-01-18 11:27:03,027 UTC [24125] INFO esmvalcore._recipe:630 Found input files for CMIP5 2022-01-18 11:27:03,032 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_thetao[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:03,033 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable thetao of dataset OBS: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2022-01-18 11:27:03,033 UTC [24125] INFO esmvalcore._recipe:630 Found input files for OBS 2022-01-18 11:27:03,043 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_surface_maps_vs_WOA/thetao created. 2022-01-18 11:27:03,043 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_surface_maps_vs_WOA/thetao will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2022-01-18 11:27:03,044 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_surface_maps_vs_WOA/so 2022-01-18 11:27:03,044 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_surface_map_regrid_3D' task for variable 'so' 2022-01-18 11:27:03,045 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['so_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so'] 2022-01-18 11:27:03,046 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable so of dataset CMIP5: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2022-01-18 11:27:03,047 UTC [24125] INFO esmvalcore._recipe:630 Found input files for CMIP5 2022-01-18 11:27:03,051 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_so[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:03,052 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable so of dataset OBS: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2022-01-18 11:27:03,052 UTC [24125] INFO esmvalcore._recipe:630 Found input files for OBS 2022-01-18 11:27:03,062 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_surface_maps_vs_WOA/so created. 2022-01-18 11:27:03,062 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_surface_maps_vs_WOA/so will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2022-01-18 11:27:03,062 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_surface_maps_vs_WOA/no3 2022-01-18 11:27:03,062 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_surface_map_regrid_3D' task for variable 'no3' 2022-01-18 11:27:03,064 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['no3_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3'] 2022-01-18 11:27:03,064 UTC [24125] DEBUG esmvalcore.esgf._search:79 Searching for datasets on ESGF using facets={'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'no3'} 2022-01-18 11:27:03,081 UTC [24125] DEBUG esmvalcore.esgf._search:99 Found the following files matching facets {'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'no3'}: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1860-1959.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:03,081 UTC [24125] DEBUG esmvalcore.esgf._search:249 Selected files: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:03,082 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable no3 of dataset CMIP5: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:03,082 UTC [24125] INFO esmvalcore._recipe:630 Found input files for CMIP5 2022-01-18 11:27:03,087 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_no3[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:03,088 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable no3 of dataset OBS: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2022-01-18 11:27:03,088 UTC [24125] INFO esmvalcore._recipe:630 Found input files for OBS 2022-01-18 11:27:03,097 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_surface_maps_vs_WOA/no3 created. 2022-01-18 11:27:03,098 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_surface_maps_vs_WOA/no3 will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2022-01-18 11:27:03,098 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_surface_maps_vs_WOA/si 2022-01-18 11:27:03,098 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_surface_map_regrid_3D' task for variable 'si' 2022-01-18 11:27:03,100 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['si_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si'] 2022-01-18 11:27:03,100 UTC [24125] DEBUG esmvalcore.esgf._search:79 Searching for datasets on ESGF using facets={'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'si'} 2022-01-18 11:27:03,116 UTC [24125] DEBUG esmvalcore.esgf._search:99 Found the following files matching facets {'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'si'}: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si_Oyr_HadGEM2-ES_historical_r1i1p1_1860-1959.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:03,116 UTC [24125] DEBUG esmvalcore.esgf._search:249 Selected files: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:03,116 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable si of dataset CMIP5: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:03,116 UTC [24125] INFO esmvalcore._recipe:630 Found input files for CMIP5 2022-01-18 11:27:03,121 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_si[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:03,122 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable si of dataset OBS: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2022-01-18 11:27:03,122 UTC [24125] INFO esmvalcore._recipe:630 Found input files for OBS 2022-01-18 11:27:03,132 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_surface_maps_vs_WOA/si created. 2022-01-18 11:27:03,132 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_surface_maps_vs_WOA/si will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2022-01-18 11:27:03,133 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_surface_maps_vs_WOA/o2 2022-01-18 11:27:03,133 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_surface_map_regrid_3D' task for variable 'o2' 2022-01-18 11:27:03,134 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['o2_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2'] 2022-01-18 11:27:03,135 UTC [24125] DEBUG esmvalcore.esgf._search:79 Searching for datasets on ESGF using facets={'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'o2'} 2022-01-18 11:27:03,151 UTC [24125] DEBUG esmvalcore.esgf._search:99 Found the following files matching facets {'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'o2'}: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1860-1959.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:03,151 UTC [24125] DEBUG esmvalcore.esgf._search:249 Selected files: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:03,151 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable o2 of dataset CMIP5: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:03,151 UTC [24125] INFO esmvalcore._recipe:630 Found input files for CMIP5 2022-01-18 11:27:03,155 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_o2[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:03,156 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable o2 of dataset OBS: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2022-01-18 11:27:03,156 UTC [24125] INFO esmvalcore._recipe:630 Found input files for OBS 2022-01-18 11:27:03,165 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_surface_maps_vs_WOA/o2 created. 2022-01-18 11:27:03,165 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_surface_maps_vs_WOA/o2 will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2022-01-18 11:27:03,165 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_surface_maps_vs_WOA/areacello 2022-01-18 11:27:03,166 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'default' task for variable 'areacello' 2022-01-18 11:27:03,167 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2022-01-18 11:27:03,167 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable areacello of dataset CMIP5: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2022-01-18 11:27:03,167 UTC [24125] INFO esmvalcore._recipe:630 Found input files for CMIP5 2022-01-18 11:27:03,170 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_surface_maps_vs_WOA/areacello created. 2022-01-18 11:27:03,170 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_surface_maps_vs_WOA/areacello will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2022-01-18 11:27:03,170 UTC [24125] INFO esmvalcore._recipe:1624 Creating diagnostic task diag_surface_maps_vs_WOA/Global_Ocean_surface_map 2022-01-18 11:27:03,171 UTC [24125] INFO esmvalcore._recipe:1624 Creating diagnostic task diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs 2022-01-18 11:27:03,171 UTC [24125] INFO esmvalcore._recipe:1608 Creating tasks for diagnostic diag_surface_maps_no_data 2022-01-18 11:27:03,171 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_surface_maps_no_data/intpp 2022-01-18 11:27:03,171 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_surface_map_2D' task for variable 'intpp' 2022-01-18 11:27:03,172 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['intpp_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp'] 2022-01-18 11:27:03,173 UTC [24125] DEBUG esmvalcore.esgf._search:79 Searching for datasets on ESGF using facets={'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Omon', 'product': 'output1', 'variable': 'intpp'} 2022-01-18 11:27:03,188 UTC [24125] DEBUG esmvalcore.esgf._search:99 Found the following files matching facets {'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Omon', 'product': 'output1', 'variable': 'intpp'}: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp_Omon_HadGEM2-ES_historical_r1i1p1_185912-195911.nc on hosts ['aims3.llnl.gov', 'esgf-data1.ceda.ac.uk', 'esgf.nci.org.au', 'esgf2.dkrz.de'] ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc on hosts ['aims3.llnl.gov', 'esgf-data1.ceda.ac.uk', 'esgf.nci.org.au', 'esgf2.dkrz.de'] 2022-01-18 11:27:03,188 UTC [24125] DEBUG esmvalcore.esgf._search:249 Selected files: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc on hosts ['aims3.llnl.gov', 'esgf-data1.ceda.ac.uk', 'esgf.nci.org.au', 'esgf2.dkrz.de'] 2022-01-18 11:27:03,188 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable intpp of dataset HadGEM2-ES: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc 2022-01-18 11:27:03,188 UTC [24125] INFO esmvalcore._recipe:630 Found input files for HadGEM2-ES 2022-01-18 11:27:03,193 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_surface_maps_no_data/intpp created. 2022-01-18 11:27:03,193 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_surface_maps_no_data/intpp will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc 2022-01-18 11:27:03,193 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_surface_maps_no_data/fgco2 2022-01-18 11:27:03,194 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_surface_map_2D' task for variable 'fgco2' 2022-01-18 11:27:03,195 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['fgco2_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2'] 2022-01-18 11:27:03,196 UTC [24125] DEBUG esmvalcore.esgf._search:79 Searching for datasets on ESGF using facets={'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Omon', 'product': 'output1', 'variable': 'fgco2'} 2022-01-18 11:27:03,211 UTC [24125] DEBUG esmvalcore.esgf._search:99 Found the following files matching facets {'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Omon', 'product': 'output1', 'variable': 'fgco2'}: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_185912-195911.nc on hosts ['aims3.llnl.gov', 'esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc on hosts ['aims3.llnl.gov', 'esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:03,211 UTC [24125] DEBUG esmvalcore.esgf._search:249 Selected files: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc on hosts ['aims3.llnl.gov', 'esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:03,211 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable fgco2 of dataset HadGEM2-ES: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc 2022-01-18 11:27:03,211 UTC [24125] INFO esmvalcore._recipe:630 Found input files for HadGEM2-ES 2022-01-18 11:27:03,216 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_surface_maps_no_data/fgco2 created. 2022-01-18 11:27:03,216 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_surface_maps_no_data/fgco2 will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004.nc 2022-01-18 11:27:03,216 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_surface_maps_no_data/chl 2022-01-18 11:27:03,216 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_surface_map_3D' task for variable 'chl' 2022-01-18 11:27:03,218 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['chl_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl'] 2022-01-18 11:27:03,218 UTC [24125] DEBUG esmvalcore.esgf._search:79 Searching for datasets on ESGF using facets={'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'chl'} 2022-01-18 11:27:03,237 UTC [24125] DEBUG esmvalcore.esgf._search:99 Found the following files matching facets {'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'chl'}: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1860-1959.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:03,237 UTC [24125] DEBUG esmvalcore.esgf._search:249 Selected files: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:03,238 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable chl of dataset HadGEM2-ES: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:03,238 UTC [24125] INFO esmvalcore._recipe:630 Found input files for HadGEM2-ES 2022-01-18 11:27:03,242 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_surface_maps_no_data/chl created. 2022-01-18 11:27:03,243 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_surface_maps_no_data/chl will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2022-01-18 11:27:03,243 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_surface_maps_no_data/dfe 2022-01-18 11:27:03,243 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_surface_map_3D' task for variable 'dfe' 2022-01-18 11:27:03,244 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['dfe_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe'] 2022-01-18 11:27:03,245 UTC [24125] DEBUG esmvalcore.esgf._search:79 Searching for datasets on ESGF using facets={'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'dfe'} 2022-01-18 11:27:03,260 UTC [24125] DEBUG esmvalcore.esgf._search:99 Found the following files matching facets {'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'dfe'}: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1860-1959.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:03,261 UTC [24125] DEBUG esmvalcore.esgf._search:249 Selected files: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:03,261 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable dfe of dataset HadGEM2-ES: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:03,261 UTC [24125] INFO esmvalcore._recipe:630 Found input files for HadGEM2-ES 2022-01-18 11:27:03,266 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_surface_maps_no_data/dfe created. 2022-01-18 11:27:03,266 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_surface_maps_no_data/dfe will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2022-01-18 11:27:03,266 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_surface_maps_no_data/areacello 2022-01-18 11:27:03,266 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'default' task for variable 'areacello' 2022-01-18 11:27:03,267 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2022-01-18 11:27:03,268 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable areacello of dataset HadGEM2-ES: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2022-01-18 11:27:03,268 UTC [24125] INFO esmvalcore._recipe:630 Found input files for HadGEM2-ES 2022-01-18 11:27:03,271 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_surface_maps_no_data/areacello created. 2022-01-18 11:27:03,271 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_surface_maps_no_data/areacello will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2022-01-18 11:27:03,271 UTC [24125] INFO esmvalcore._recipe:1624 Creating diagnostic task diag_surface_maps_no_data/Global_Ocean_surface_map 2022-01-18 11:27:03,271 UTC [24125] INFO esmvalcore._recipe:1608 Creating tasks for diagnostic diag_transect_vs_WOA 2022-01-18 11:27:03,271 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_transect_vs_WOA/thetao 2022-01-18 11:27:03,272 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_transect_AMT' task for variable 'thetao' 2022-01-18 11:27:03,273 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['thetao_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao'] 2022-01-18 11:27:03,274 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable thetao of dataset CMIP5: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2022-01-18 11:27:03,274 UTC [24125] INFO esmvalcore._recipe:630 Found input files for CMIP5 2022-01-18 11:27:03,278 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_thetao[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:03,279 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable thetao of dataset OBS: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2022-01-18 11:27:03,279 UTC [24125] INFO esmvalcore._recipe:630 Found input files for OBS 2022-01-18 11:27:03,289 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_transect_vs_WOA/thetao created. 2022-01-18 11:27:03,289 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_transect_vs_WOA/thetao will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2022-01-18 11:27:03,289 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_transect_vs_WOA/so 2022-01-18 11:27:03,289 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_transect_AMT' task for variable 'so' 2022-01-18 11:27:03,291 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['so_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so'] 2022-01-18 11:27:03,292 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable so of dataset CMIP5: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2022-01-18 11:27:03,292 UTC [24125] INFO esmvalcore._recipe:630 Found input files for CMIP5 2022-01-18 11:27:03,296 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_so[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:03,297 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable so of dataset OBS: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2022-01-18 11:27:03,297 UTC [24125] INFO esmvalcore._recipe:630 Found input files for OBS 2022-01-18 11:27:03,306 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_transect_vs_WOA/so created. 2022-01-18 11:27:03,306 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_transect_vs_WOA/so will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2022-01-18 11:27:03,306 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_transect_vs_WOA/no3 2022-01-18 11:27:03,306 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_transect_AMT' task for variable 'no3' 2022-01-18 11:27:03,307 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['no3_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3'] 2022-01-18 11:27:03,308 UTC [24125] DEBUG esmvalcore.esgf._search:79 Searching for datasets on ESGF using facets={'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'no3'} 2022-01-18 11:27:03,324 UTC [24125] DEBUG esmvalcore.esgf._search:99 Found the following files matching facets {'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'no3'}: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1860-1959.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:03,324 UTC [24125] DEBUG esmvalcore.esgf._search:249 Selected files: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:03,324 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable no3 of dataset CMIP5: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:03,324 UTC [24125] INFO esmvalcore._recipe:630 Found input files for CMIP5 2022-01-18 11:27:03,328 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_no3[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:03,329 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable no3 of dataset OBS: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2022-01-18 11:27:03,329 UTC [24125] INFO esmvalcore._recipe:630 Found input files for OBS 2022-01-18 11:27:03,339 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_transect_vs_WOA/no3 created. 2022-01-18 11:27:03,339 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_transect_vs_WOA/no3 will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2022-01-18 11:27:03,339 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_transect_vs_WOA/si 2022-01-18 11:27:03,339 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_transect_AMT' task for variable 'si' 2022-01-18 11:27:03,340 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['si_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si'] 2022-01-18 11:27:03,341 UTC [24125] DEBUG esmvalcore.esgf._search:79 Searching for datasets on ESGF using facets={'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'si'} 2022-01-18 11:27:03,358 UTC [24125] DEBUG esmvalcore.esgf._search:99 Found the following files matching facets {'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'si'}: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si_Oyr_HadGEM2-ES_historical_r1i1p1_1860-1959.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:03,358 UTC [24125] DEBUG esmvalcore.esgf._search:249 Selected files: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:03,358 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable si of dataset CMIP5: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:03,358 UTC [24125] INFO esmvalcore._recipe:630 Found input files for CMIP5 2022-01-18 11:27:03,363 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_si[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:03,364 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable si of dataset OBS: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2022-01-18 11:27:03,364 UTC [24125] INFO esmvalcore._recipe:630 Found input files for OBS 2022-01-18 11:27:03,373 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_transect_vs_WOA/si created. 2022-01-18 11:27:03,373 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_transect_vs_WOA/si will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2022-01-18 11:27:03,373 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_transect_vs_WOA/o2 2022-01-18 11:27:03,373 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_transect_AMT' task for variable 'o2' 2022-01-18 11:27:03,375 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['o2_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2'] 2022-01-18 11:27:03,375 UTC [24125] DEBUG esmvalcore.esgf._search:79 Searching for datasets on ESGF using facets={'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'o2'} 2022-01-18 11:27:03,390 UTC [24125] DEBUG esmvalcore.esgf._search:99 Found the following files matching facets {'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'o2'}: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1860-1959.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:03,390 UTC [24125] DEBUG esmvalcore.esgf._search:249 Selected files: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:03,391 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable o2 of dataset CMIP5: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:03,391 UTC [24125] INFO esmvalcore._recipe:630 Found input files for CMIP5 2022-01-18 11:27:03,395 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_o2[_.]*nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA'] 2022-01-18 11:27:03,396 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable o2 of dataset OBS: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2022-01-18 11:27:03,396 UTC [24125] INFO esmvalcore._recipe:630 Found input files for OBS 2022-01-18 11:27:03,405 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_transect_vs_WOA/o2 created. 2022-01-18 11:27:03,405 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_transect_vs_WOA/o2 will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2022-01-18 11:27:03,406 UTC [24125] INFO esmvalcore._recipe:1624 Creating diagnostic task diag_transect_vs_WOA/Transects_vs_WOA 2022-01-18 11:27:03,406 UTC [24125] INFO esmvalcore._recipe:1608 Creating tasks for diagnostic diag_transect_no_data 2022-01-18 11:27:03,406 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_transect_no_data/chl 2022-01-18 11:27:03,406 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_transect_AMT' task for variable 'chl' 2022-01-18 11:27:03,407 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['chl_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl'] 2022-01-18 11:27:03,408 UTC [24125] DEBUG esmvalcore.esgf._search:79 Searching for datasets on ESGF using facets={'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'chl'} 2022-01-18 11:27:03,423 UTC [24125] DEBUG esmvalcore.esgf._search:99 Found the following files matching facets {'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'chl'}: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1860-1959.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:03,423 UTC [24125] DEBUG esmvalcore.esgf._search:249 Selected files: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:03,423 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable chl of dataset HadGEM2-ES: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:03,423 UTC [24125] INFO esmvalcore._recipe:630 Found input files for HadGEM2-ES 2022-01-18 11:27:03,428 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_transect_no_data/chl created. 2022-01-18 11:27:03,428 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_transect_no_data/chl will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2022-01-18 11:27:03,429 UTC [24125] INFO esmvalcore._recipe:1582 Creating preprocessor task diag_transect_no_data/dfe 2022-01-18 11:27:03,429 UTC [24125] INFO esmvalcore._recipe:1055 Creating preprocessor 'prep_transect_AMT' task for variable 'dfe' 2022-01-18 11:27:03,430 UTC [24125] DEBUG esmvalcore._data_finder:20 Looking for files matching ['dfe_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe'] 2022-01-18 11:27:03,431 UTC [24125] DEBUG esmvalcore.esgf._search:79 Searching for datasets on ESGF using facets={'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'dfe'} 2022-01-18 11:27:03,446 UTC [24125] DEBUG esmvalcore.esgf._search:99 Found the following files matching facets {'project': 'CMIP5', 'model': 'HadGEM2-ES', 'ensemble': 'r1i1p1', 'experiment': 'historical', 'cmor_table': 'Oyr', 'product': 'output1', 'variable': 'dfe'}: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1860-1959.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:03,446 UTC [24125] DEBUG esmvalcore.esgf._search:249 Selected files: ESGFFile:cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc on hosts ['esgf-data1.ceda.ac.uk', 'esgf2.dkrz.de'] 2022-01-18 11:27:03,446 UTC [24125] DEBUG esmvalcore._recipe:621 Using input files for variable dfe of dataset HadGEM2-ES: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:03,446 UTC [24125] INFO esmvalcore._recipe:630 Found input files for HadGEM2-ES 2022-01-18 11:27:03,451 UTC [24125] INFO esmvalcore._recipe:960 PreprocessingTask diag_transect_no_data/dfe created. 2022-01-18 11:27:03,451 UTC [24125] DEBUG esmvalcore._recipe:961 PreprocessingTask diag_transect_no_data/dfe will create the files: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2022-01-18 11:27:03,452 UTC [24125] INFO esmvalcore._recipe:1624 Creating diagnostic task diag_transect_no_data/Transects_no_data 2022-01-18 11:27:03,452 UTC [24125] DEBUG esmvalcore._recipe:1496 Linking tasks for diagnostic diag_timeseries_volume_average_vs_WOA script Global_Volume_Average_timeseries 2022-01-18 11:27:03,452 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_timeseries_volume_average_vs_WOA/thetao matches ['diag_timeseries_volume_average_vs_WOA/thetao'] 2022-01-18 11:27:03,453 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_timeseries_volume_average_vs_WOA/so matches ['diag_timeseries_volume_average_vs_WOA/so'] 2022-01-18 11:27:03,453 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_timeseries_volume_average_vs_WOA/no3 matches ['diag_timeseries_volume_average_vs_WOA/no3'] 2022-01-18 11:27:03,453 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_timeseries_volume_average_vs_WOA/o2 matches ['diag_timeseries_volume_average_vs_WOA/o2'] 2022-01-18 11:27:03,453 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_timeseries_volume_average_vs_WOA/si matches ['diag_timeseries_volume_average_vs_WOA/si'] 2022-01-18 11:27:03,453 UTC [24125] DEBUG esmvalcore._recipe:1496 Linking tasks for diagnostic diag_timeseries_volume_average_no_obs script Global_Volume_verage_timeseries 2022-01-18 11:27:03,454 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_timeseries_volume_average_no_obs/chl matches ['diag_timeseries_volume_average_no_obs/chl'] 2022-01-18 11:27:03,454 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_timeseries_volume_average_no_obs/dfe matches ['diag_timeseries_volume_average_no_obs/dfe'] 2022-01-18 11:27:03,454 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_timeseries_volume_average_no_obs/talk matches ['diag_timeseries_volume_average_no_obs/talk'] 2022-01-18 11:27:03,454 UTC [24125] DEBUG esmvalcore._recipe:1496 Linking tasks for diagnostic diag_timeseries_surface_average_no_obs script Global_Volume_Average_timeseries 2022-01-18 11:27:03,455 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_timeseries_surface_average_no_obs/talk matches ['diag_timeseries_surface_average_no_obs/talk'] 2022-01-18 11:27:03,455 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_timeseries_surface_average_no_obs/intpp matches ['diag_timeseries_surface_average_no_obs/intpp'] 2022-01-18 11:27:03,455 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_timeseries_surface_average_no_obs/chl matches ['diag_timeseries_surface_average_no_obs/chl'] 2022-01-18 11:27:03,455 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_timeseries_surface_average_no_obs/areacello matches ['diag_timeseries_surface_average_no_obs/areacello'] 2022-01-18 11:27:03,455 UTC [24125] DEBUG esmvalcore._recipe:1496 Linking tasks for diagnostic diag_timeseries_surface_average_vs_WOA script Global_Volume_Average_timeseries 2022-01-18 11:27:03,456 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_timeseries_surface_average_vs_WOA/thetao matches ['diag_timeseries_surface_average_vs_WOA/thetao'] 2022-01-18 11:27:03,456 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_timeseries_surface_average_vs_WOA/so matches ['diag_timeseries_surface_average_vs_WOA/so'] 2022-01-18 11:27:03,456 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_timeseries_surface_average_vs_WOA/no3 matches ['diag_timeseries_surface_average_vs_WOA/no3'] 2022-01-18 11:27:03,457 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_timeseries_surface_average_vs_WOA/o2 matches ['diag_timeseries_surface_average_vs_WOA/o2'] 2022-01-18 11:27:03,457 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_timeseries_surface_average_vs_WOA/si matches ['diag_timeseries_surface_average_vs_WOA/si'] 2022-01-18 11:27:03,457 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_timeseries_surface_average_vs_WOA/areacello matches ['diag_timeseries_surface_average_vs_WOA/areacello'] 2022-01-18 11:27:03,457 UTC [24125] DEBUG esmvalcore._recipe:1496 Linking tasks for diagnostic diag_timeseries_scalars script Scalar_timeseries 2022-01-18 11:27:03,457 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_timeseries_scalars/mfo matches ['diag_timeseries_scalars/mfo'] 2022-01-18 11:27:03,457 UTC [24125] DEBUG esmvalcore._recipe:1496 Linking tasks for diagnostic diag_profile_vs_WOA script Global_profile_vs_WOA 2022-01-18 11:27:03,458 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_profile_vs_WOA/thetao matches ['diag_profile_vs_WOA/thetao'] 2022-01-18 11:27:03,458 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_profile_vs_WOA/so matches ['diag_profile_vs_WOA/so'] 2022-01-18 11:27:03,458 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_profile_vs_WOA/no3 matches ['diag_profile_vs_WOA/no3'] 2022-01-18 11:27:03,458 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_profile_vs_WOA/o2 matches ['diag_profile_vs_WOA/o2'] 2022-01-18 11:27:03,459 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_profile_vs_WOA/si matches ['diag_profile_vs_WOA/si'] 2022-01-18 11:27:03,459 UTC [24125] DEBUG esmvalcore._recipe:1496 Linking tasks for diagnostic diag_profile_no_obs script Global_profile_no_obs 2022-01-18 11:27:03,459 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_profile_no_obs/chl matches ['diag_profile_no_obs/chl'] 2022-01-18 11:27:03,459 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_profile_no_obs/dfe matches ['diag_profile_no_obs/dfe'] 2022-01-18 11:27:03,459 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_profile_no_obs/talk matches ['diag_profile_no_obs/talk'] 2022-01-18 11:27:03,459 UTC [24125] DEBUG esmvalcore._recipe:1496 Linking tasks for diagnostic diag_surface_maps_vs_WOA script Global_Ocean_surface_map 2022-01-18 11:27:03,460 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_surface_maps_vs_WOA/thetao matches ['diag_surface_maps_vs_WOA/thetao'] 2022-01-18 11:27:03,460 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_surface_maps_vs_WOA/so matches ['diag_surface_maps_vs_WOA/so'] 2022-01-18 11:27:03,460 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_surface_maps_vs_WOA/no3 matches ['diag_surface_maps_vs_WOA/no3'] 2022-01-18 11:27:03,460 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_surface_maps_vs_WOA/si matches ['diag_surface_maps_vs_WOA/si'] 2022-01-18 11:27:03,460 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_surface_maps_vs_WOA/o2 matches ['diag_surface_maps_vs_WOA/o2'] 2022-01-18 11:27:03,461 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_surface_maps_vs_WOA/areacello matches ['diag_surface_maps_vs_WOA/areacello'] 2022-01-18 11:27:03,461 UTC [24125] DEBUG esmvalcore._recipe:1496 Linking tasks for diagnostic diag_surface_maps_vs_WOA script Global_Ocean_model_vs_obs 2022-01-18 11:27:03,461 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_surface_maps_vs_WOA/thetao matches ['diag_surface_maps_vs_WOA/thetao'] 2022-01-18 11:27:03,461 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_surface_maps_vs_WOA/so matches ['diag_surface_maps_vs_WOA/so'] 2022-01-18 11:27:03,461 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_surface_maps_vs_WOA/no3 matches ['diag_surface_maps_vs_WOA/no3'] 2022-01-18 11:27:03,461 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_surface_maps_vs_WOA/si matches ['diag_surface_maps_vs_WOA/si'] 2022-01-18 11:27:03,461 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_surface_maps_vs_WOA/o2 matches ['diag_surface_maps_vs_WOA/o2'] 2022-01-18 11:27:03,461 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_surface_maps_vs_WOA/areacello matches ['diag_surface_maps_vs_WOA/areacello'] 2022-01-18 11:27:03,461 UTC [24125] DEBUG esmvalcore._recipe:1496 Linking tasks for diagnostic diag_surface_maps_no_data script Global_Ocean_surface_map 2022-01-18 11:27:03,461 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_surface_maps_no_data/intpp matches ['diag_surface_maps_no_data/intpp'] 2022-01-18 11:27:03,462 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_surface_maps_no_data/fgco2 matches ['diag_surface_maps_no_data/fgco2'] 2022-01-18 11:27:03,462 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_surface_maps_no_data/chl matches ['diag_surface_maps_no_data/chl'] 2022-01-18 11:27:03,462 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_surface_maps_no_data/dfe matches ['diag_surface_maps_no_data/dfe'] 2022-01-18 11:27:03,462 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_surface_maps_no_data/areacello matches ['diag_surface_maps_no_data/areacello'] 2022-01-18 11:27:03,463 UTC [24125] DEBUG esmvalcore._recipe:1496 Linking tasks for diagnostic diag_transect_vs_WOA script Transects_vs_WOA 2022-01-18 11:27:03,463 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_transect_vs_WOA/thetao matches ['diag_transect_vs_WOA/thetao'] 2022-01-18 11:27:03,463 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_transect_vs_WOA/so matches ['diag_transect_vs_WOA/so'] 2022-01-18 11:27:03,463 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_transect_vs_WOA/no3 matches ['diag_transect_vs_WOA/no3'] 2022-01-18 11:27:03,463 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_transect_vs_WOA/si matches ['diag_transect_vs_WOA/si'] 2022-01-18 11:27:03,464 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_transect_vs_WOA/o2 matches ['diag_transect_vs_WOA/o2'] 2022-01-18 11:27:03,464 UTC [24125] DEBUG esmvalcore._recipe:1496 Linking tasks for diagnostic diag_transect_no_data script Transects_no_data 2022-01-18 11:27:03,464 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_transect_no_data/chl matches ['diag_transect_no_data/chl'] 2022-01-18 11:27:03,464 UTC [24125] DEBUG esmvalcore._recipe:1505 Pattern diag_transect_no_data/dfe matches ['diag_transect_no_data/dfe'] 2022-01-18 11:27:03,464 UTC [24125] INFO esmvalcore._recipe:1664 These tasks will be executed: diag_surface_maps_no_data/Global_Ocean_surface_map, diag_profile_vs_WOA/thetao, diag_surface_maps_no_data/areacello, diag_timeseries_scalars/mfo, diag_profile_vs_WOA/Global_profile_vs_WOA, diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs, diag_timeseries_surface_average_vs_WOA/si, diag_timeseries_surface_average_vs_WOA/o2, diag_transect_vs_WOA/Transects_vs_WOA, diag_timeseries_volume_average_no_obs/chl, diag_surface_maps_no_data/chl, diag_timeseries_surface_average_vs_WOA/no3, diag_profile_vs_WOA/no3, diag_timeseries_volume_average_no_obs/talk, diag_timeseries_surface_average_vs_WOA/so, diag_transect_vs_WOA/so, diag_surface_maps_vs_WOA/so, diag_profile_no_obs/Global_profile_no_obs, diag_timeseries_surface_average_no_obs/intpp, diag_surface_maps_vs_WOA/Global_Ocean_surface_map, diag_profile_vs_WOA/o2, diag_profile_vs_WOA/so, diag_timeseries_volume_average_vs_WOA/no3, diag_profile_no_obs/chl, diag_timeseries_volume_average_vs_WOA/o2, diag_timeseries_surface_average_vs_WOA/thetao, diag_transect_no_data/dfe, diag_surface_maps_vs_WOA/si, diag_transect_no_data/Transects_no_data, diag_surface_maps_no_data/intpp, diag_transect_vs_WOA/o2, diag_timeseries_volume_average_vs_WOA/thetao, diag_timeseries_volume_average_vs_WOA/si, diag_transect_vs_WOA/no3, diag_timeseries_surface_average_no_obs/chl, diag_timeseries_surface_average_no_obs/talk, diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries, diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries, diag_profile_no_obs/dfe, diag_surface_maps_vs_WOA/areacello, diag_timeseries_surface_average_no_obs/areacello, diag_surface_maps_vs_WOA/thetao, diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries, diag_surface_maps_vs_WOA/o2, diag_timeseries_surface_average_vs_WOA/areacello, diag_timeseries_scalars/Scalar_timeseries, diag_timeseries_volume_average_no_obs/dfe, diag_timeseries_volume_average_vs_WOA/so, diag_transect_vs_WOA/thetao, diag_surface_maps_no_data/fgco2, diag_surface_maps_no_data/dfe, diag_surface_maps_vs_WOA/no3, diag_profile_no_obs/talk, diag_transect_no_data/chl, diag_transect_vs_WOA/si, diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries, diag_profile_vs_WOA/si 2022-01-18 11:27:03,489 UTC [24125] DEBUG esmvalcore._main:122 Recipe summary: DiagnosticTask: diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries script: ocean/diagnostic_timeseries.py settings: {'auxiliary_data_dir': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/AUX', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/plots/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/run/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries', 'script': 'Global_Volume_Average_timeseries', 'version': '2.4.0', 'work_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/work/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries'} ancestors: PreprocessingTask: diag_timeseries_surface_average_no_obs/talk order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'area_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'talk'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'talk'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Alkalinity', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'talk', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'talk', 'standard_name': 'sea_water_alkalinity_expressed_as_mole_equivalent', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'talk'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Alkalinity', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'talk', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'talk', 'standard_name': 'sea_water_alkalinity_expressed_as_mole_equivalent', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'talk'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Alkalinity', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'talk', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'talk', 'standard_name': 'sea_water_alkalinity_expressed_as_mole_equivalent', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'talk'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_timeseries_surface_average_no_obs/intpp order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_2D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_2D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'intpp'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'intpp'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Primary Organic Carbon Production by All Types of ' 'Phytoplankton', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'intpp', 'preprocessor': 'prep_global_Surface_average_timeseries_2D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'intpp', 'standard_name': 'net_primary_mole_productivity_of_carbon_by_phytoplankton', 'timerange': '2001/2004', 'units': 'mol m-2 s-1', 'variable_group': 'intpp'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Primary Organic Carbon Production by All Types of ' 'Phytoplankton', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'intpp', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_2D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'intpp', 'standard_name': 'net_primary_mole_productivity_of_carbon_by_phytoplankton', 'timerange': '2001/2004', 'units': 'mol m-2 s-1', 'variable_group': 'intpp'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Primary Organic Carbon Production by All Types ' 'of Phytoplankton', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'intpp', 'preprocessor': 'prep_global_Surface_average_timeseries_2D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'intpp', 'standard_name': 'net_primary_mole_productivity_of_carbon_by_phytoplankton', 'timerange': '2001/2004', 'units': 'mol m-2 s-1', 'variable_group': 'intpp'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_timeseries_surface_average_no_obs/chl order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'area_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'thresholds': [0.1, 0.2, 0.5], 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'thresholds': [0.1, 0.2, 0.5], 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'thresholds': [0.1, 0.2, 0.5], 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'thresholds': [0.1, 0.2, 0.5], 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'thresholds': [0.1, 0.2, 0.5], 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_timeseries_surface_average_no_obs/areacello order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'default', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed', 'preprocessor': 'default', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'default', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc'}} ancestors: None DiagnosticTask: diag_surface_maps_no_data/Global_Ocean_surface_map script: ocean/diagnostic_maps.py settings: {'auxiliary_data_dir': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/AUX', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/plots/diag_surface_maps_no_data/Global_Ocean_surface_map', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/run/diag_surface_maps_no_data/Global_Ocean_surface_map', 'script': 'Global_Ocean_surface_map', 'version': '2.4.0', 'work_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/work/diag_surface_maps_no_data/Global_Ocean_surface_map'} ancestors: PreprocessingTask: diag_surface_maps_no_data/intpp order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'intpp'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'intpp'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Primary Organic Carbon Production by All Types of ' 'Phytoplankton', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'intpp', 'preprocessor': 'prep_surface_map_2D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'intpp', 'standard_name': 'net_primary_mole_productivity_of_carbon_by_phytoplankton', 'timerange': '2001/2004', 'units': 'mol m-2 s-1', 'variable_group': 'intpp'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Primary Organic Carbon Production by All Types of ' 'Phytoplankton', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'intpp', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004_fixed', 'preprocessor': 'prep_surface_map_2D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'intpp', 'standard_name': 'net_primary_mole_productivity_of_carbon_by_phytoplankton', 'timerange': '2001/2004', 'units': 'mol m-2 s-1', 'variable_group': 'intpp'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Primary Organic Carbon Production by All Types ' 'of Phytoplankton', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'intpp', 'preprocessor': 'prep_surface_map_2D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'intpp', 'standard_name': 'net_primary_mole_productivity_of_carbon_by_phytoplankton', 'timerange': '2001/2004', 'units': 'mol m-2 s-1', 'variable_group': 'intpp'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_no_data/fgco2 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'fgco2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'fgco2'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Surface Downward CO2 Flux', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'fgco2', 'preprocessor': 'prep_surface_map_2D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'fgco2', 'standard_name': 'surface_downward_mass_flux_of_carbon_dioxide_expressed_as_carbon', 'timerange': '2001/2004', 'units': 'kg m-2 s-1', 'variable_group': 'fgco2'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Surface Downward CO2 Flux', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'fgco2', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004_fixed', 'preprocessor': 'prep_surface_map_2D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'fgco2', 'standard_name': 'surface_downward_mass_flux_of_carbon_dioxide_expressed_as_carbon', 'timerange': '2001/2004', 'units': 'kg m-2 s-1', 'variable_group': 'fgco2'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Surface Downward CO2 Flux', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'fgco2', 'preprocessor': 'prep_surface_map_2D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'fgco2', 'standard_name': 'surface_downward_mass_flux_of_carbon_dioxide_expressed_as_carbon', 'timerange': '2001/2004', 'units': 'kg m-2 s-1', 'variable_group': 'fgco2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_no_data/chl order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'preprocessor': 'prep_surface_map_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed', 'preprocessor': 'prep_surface_map_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'preprocessor': 'prep_surface_map_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_no_data/dfe order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'dfe'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'dfe'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'preprocessor': 'prep_surface_map_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed', 'preprocessor': 'prep_surface_map_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'preprocessor': 'prep_surface_map_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_no_data/areacello order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'default', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed', 'preprocessor': 'default', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'default', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc'}} ancestors: None DiagnosticTask: diag_timeseries_scalars/Scalar_timeseries script: ocean/diagnostic_timeseries.py settings: {'auxiliary_data_dir': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/AUX', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/plots/diag_timeseries_scalars/Scalar_timeseries', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/run/diag_timeseries_scalars/Scalar_timeseries', 'script': 'Scalar_timeseries', 'version': '2.4.0', 'work_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/work/diag_timeseries_scalars/Scalar_timeseries'} ancestors: PreprocessingTask: diag_timeseries_scalars/mfo order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'mfo'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'mfo'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_scalars', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Transport', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'mfo', 'preprocessor': 'prep_timeseries_scalar', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'mfo', 'standard_name': 'sea_water_transport_across_line', 'timerange': '2001/2004', 'units': 'kg s-1', 'variable_group': 'mfo'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_scalars', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Transport', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'mfo', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004_fixed', 'preprocessor': 'prep_timeseries_scalar', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'mfo', 'standard_name': 'sea_water_transport_across_line', 'timerange': '2001/2004', 'units': 'kg s-1', 'variable_group': 'mfo'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_scalars', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Transport', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'mfo', 'preprocessor': 'prep_timeseries_scalar', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'mfo', 'standard_name': 'sea_water_transport_across_line', 'timerange': '2001/2004', 'units': 'kg s-1', 'variable_group': 'mfo'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc'}} ancestors: None DiagnosticTask: diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries script: ocean/diagnostic_timeseries.py settings: {'auxiliary_data_dir': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/AUX', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/plots/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/run/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries', 'script': 'Global_Volume_Average_timeseries', 'version': '2.4.0', 'work_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/work/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries'} ancestors: PreprocessingTask: diag_timeseries_volume_average_vs_WOA/thetao order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'}, 'volume_statistics': {'operator': 'mean'}} PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'volcello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'}, 'volume_statistics': {'operator': 'mean'}} ancestors: None PreprocessingTask: diag_timeseries_volume_average_vs_WOA/so order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'volcello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'}, 'volume_statistics': {'operator': 'mean'}} PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'}, 'volume_statistics': {'operator': 'mean'}} ancestors: None PreprocessingTask: diag_timeseries_volume_average_vs_WOA/no3 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'}, 'volume_statistics': {'operator': 'mean'}} PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'volcello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'}, 'volume_statistics': {'operator': 'mean'}} ancestors: None PreprocessingTask: diag_timeseries_volume_average_vs_WOA/o2 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'}, 'volume_statistics': {'operator': 'mean'}} PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'volcello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'}, 'volume_statistics': {'operator': 'mean'}} ancestors: None PreprocessingTask: diag_timeseries_volume_average_vs_WOA/si order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'}, 'volume_statistics': {'operator': 'mean'}} PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'volcello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'}, 'volume_statistics': {'operator': 'mean'}} ancestors: None DiagnosticTask: diag_profile_no_obs/Global_profile_no_obs script: ocean/diagnostic_profiles.py settings: {'auxiliary_data_dir': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/AUX', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/plots/diag_profile_no_obs/Global_profile_no_obs', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/run/diag_profile_no_obs/Global_profile_no_obs', 'script': 'Global_profile_no_obs', 'version': '2.4.0', 'work_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/work/diag_profile_no_obs/Global_profile_no_obs'} ancestors: PreprocessingTask: diag_profile_no_obs/chl order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_profile_no_obs/dfe order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'dfe'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'dfe'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_profile_no_obs/talk order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'talk'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'talk'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Alkalinity', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'talk', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'talk', 'standard_name': 'sea_water_alkalinity_expressed_as_mole_equivalent', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'talk'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Alkalinity', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'talk', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'talk', 'standard_name': 'sea_water_alkalinity_expressed_as_mole_equivalent', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'talk'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Alkalinity', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'talk', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'talk', 'standard_name': 'sea_water_alkalinity_expressed_as_mole_equivalent', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'talk'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc'}} ancestors: None DiagnosticTask: diag_profile_vs_WOA/Global_profile_vs_WOA script: ocean/diagnostic_profiles.py settings: {'auxiliary_data_dir': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/AUX', 'log_level': 'info', 'observational_dataset': {'dataset': 'WOA', 'project': 'OBS'}, 'output_file_type': 'png', 'plot_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/plots/diag_profile_vs_WOA/Global_profile_vs_WOA', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/run/diag_profile_vs_WOA/Global_profile_vs_WOA', 'script': 'Global_profile_vs_WOA', 'version': '2.4.0', 'work_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/work/diag_profile_vs_WOA/Global_profile_vs_WOA'} ancestors: PreprocessingTask: diag_profile_vs_WOA/thetao order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'}} PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_profile_vs_WOA/so order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'}} PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_profile_vs_WOA/no3 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'}} PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_profile_vs_WOA/o2 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'}} PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_profile_vs_WOA/si order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'}} PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_global_profile', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'}} ancestors: None DiagnosticTask: diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries script: ocean/diagnostic_timeseries.py settings: {'auxiliary_data_dir': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/AUX', 'log_level': 'info', 'observational_dataset': {'dataset': 'WOA', 'project': 'OBS'}, 'output_file_type': 'png', 'plot_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/plots/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/run/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries', 'script': 'Global_Volume_Average_timeseries', 'version': '2.4.0', 'work_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/work/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries'} ancestors: PreprocessingTask: diag_timeseries_surface_average_vs_WOA/thetao order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'area_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'}} PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_timeseries_surface_average_vs_WOA/so order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'area_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'}} PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_timeseries_surface_average_vs_WOA/no3 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'area_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'}} PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_timeseries_surface_average_vs_WOA/o2 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'area_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'}} PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_timeseries_surface_average_vs_WOA/si order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'area_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'}} PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_timeseries_surface_average_vs_WOA/areacello order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'default', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed', 'preprocessor': 'default', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'default', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc'}} ancestors: None DiagnosticTask: diag_surface_maps_vs_WOA/Global_Ocean_surface_map script: ocean/diagnostic_maps.py settings: {'auxiliary_data_dir': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/AUX', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/plots/diag_surface_maps_vs_WOA/Global_Ocean_surface_map', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/run/diag_surface_maps_vs_WOA/Global_Ocean_surface_map', 'script': 'Global_Ocean_surface_map', 'version': '2.4.0', 'work_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/work/diag_surface_maps_vs_WOA/Global_Ocean_surface_map'} ancestors: PreprocessingTask: diag_surface_maps_vs_WOA/thetao order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'}} PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_vs_WOA/so order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'}} PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_vs_WOA/no3 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'}} PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_vs_WOA/si order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'}} PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_vs_WOA/o2 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'}} PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_vs_WOA/areacello order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'default', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed', 'preprocessor': 'default', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'default', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc'}} ancestors: None DiagnosticTask: diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs script: ocean/diagnostic_model_vs_obs.py settings: {'auxiliary_data_dir': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/AUX', 'log_level': 'info', 'observational_dataset': {'dataset': 'WOA', 'project': 'OBS'}, 'output_file_type': 'png', 'plot_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/plots/diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/run/diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs', 'script': 'Global_Ocean_model_vs_obs', 'version': '2.4.0', 'work_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/work/diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs'} ancestors: PreprocessingTask: diag_surface_maps_vs_WOA/thetao order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'}} PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_vs_WOA/so order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'}} PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_vs_WOA/no3 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'}} PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_vs_WOA/si order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'}} PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_vs_WOA/o2 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'}} PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_vs_WOA/areacello order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'default', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed', 'preprocessor': 'default', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'default', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc'}} ancestors: None DiagnosticTask: diag_transect_no_data/Transects_no_data script: ocean/diagnostic_transects.py settings: {'auxiliary_data_dir': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/AUX', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/plots/diag_transect_no_data/Transects_no_data', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/run/diag_transect_no_data/Transects_no_data', 'script': 'Transects_no_data', 'version': '2.4.0', 'work_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/work/diag_transect_no_data/Transects_no_data'} ancestors: PreprocessingTask: diag_transect_no_data/chl order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'preprocessor': 'prep_transect_AMT', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed', 'preprocessor': 'prep_transect_AMT', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'preprocessor': 'prep_transect_AMT', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_transect_no_data/dfe order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'dfe'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'dfe'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'preprocessor': 'prep_transect_AMT', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed', 'preprocessor': 'prep_transect_AMT', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'preprocessor': 'prep_transect_AMT', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc'}} ancestors: None DiagnosticTask: diag_transect_vs_WOA/Transects_vs_WOA script: ocean/diagnostic_transects.py settings: {'auxiliary_data_dir': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/AUX', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/plots/diag_transect_vs_WOA/Transects_vs_WOA', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/run/diag_transect_vs_WOA/Transects_vs_WOA', 'script': 'Transects_vs_WOA', 'version': '2.4.0', 'work_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/work/diag_transect_vs_WOA/Transects_vs_WOA'} ancestors: PreprocessingTask: diag_transect_vs_WOA/thetao order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'thresholds': [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'thresholds': [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'thresholds': [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'}} PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_transect_AMT', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'thresholds': [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed', 'preprocessor': 'prep_transect_AMT', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'thresholds': [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_transect_AMT', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'thresholds': [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_transect_vs_WOA/so order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'}} PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_transect_AMT', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed', 'preprocessor': 'prep_transect_AMT', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_transect_AMT', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_transect_vs_WOA/no3 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_transect_AMT', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'thresholds': [10.0, 20.0, 30.0], 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed', 'preprocessor': 'prep_transect_AMT', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'thresholds': [10.0, 20.0, 30.0], 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_transect_AMT', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'thresholds': [10.0, 20.0, 30.0], 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'}} PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'thresholds': [10.0, 20.0, 30.0], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'thresholds': [10.0, 20.0, 30.0], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'thresholds': [10.0, 20.0, 30.0], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_transect_vs_WOA/si order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'}} PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_transect_AMT', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed', 'preprocessor': 'prep_transect_AMT', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_transect_AMT', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_transect_vs_WOA/o2 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_transect_AMT', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'thresholds': [0.03], 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed', 'preprocessor': 'prep_transect_AMT', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'thresholds': [0.03], 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_transect_AMT', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'thresholds': [0.03], 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'}} PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'thresholds': [0.03], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'thresholds': [0.03], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'thresholds': [0.03], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'}} ancestors: None DiagnosticTask: diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries script: ocean/diagnostic_timeseries.py settings: {'auxiliary_data_dir': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/AUX', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/plots/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/run/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries', 'script': 'Global_Volume_verage_timeseries', 'version': '2.4.0', 'work_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/work/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries'} ancestors: PreprocessingTask: diag_timeseries_volume_average_no_obs/chl order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'volcello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc'}, 'volume_statistics': {'operator': 'mean'}} ancestors: None PreprocessingTask: diag_timeseries_volume_average_no_obs/dfe order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'volcello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'dfe'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'dfe'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc'}, 'volume_statistics': {'operator': 'mean'}} ancestors: None PreprocessingTask: diag_timeseries_volume_average_no_obs/talk order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'volcello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}}, 'cleanup': {'remove': ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'talk'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'talk'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Alkalinity', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'talk', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'talk', 'standard_name': 'sea_water_alkalinity_expressed_as_mole_equivalent', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'talk'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Alkalinity', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'talk', 'output_dir': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'talk', 'standard_name': 'sea_water_alkalinity_expressed_as_mole_equivalent', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'talk'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Alkalinity', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'talk', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'talk', 'standard_name': 'sea_water_alkalinity_expressed_as_mole_equivalent', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'talk'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc'}, 'volume_statistics': {'operator': 'mean'}} ancestors: None 2022-01-18 11:27:03,612 UTC [24125] INFO esmvalcore.esgf._download:413 All required data is available locally, not downloading anything. 2022-01-18 11:27:03,612 UTC [24125] INFO esmvalcore._task:731 Running 57 tasks using 8 processes 2022-01-18 11:27:03,653 UTC [24128] INFO esmvalcore._task:250 Starting task diag_timeseries_volume_average_vs_WOA/thetao in process [24128] 2022-01-18 11:27:03,654 UTC [24129] INFO esmvalcore._task:250 Starting task diag_timeseries_volume_average_vs_WOA/so in process [24129] 2022-01-18 11:27:03,655 UTC [24130] INFO esmvalcore._task:250 Starting task diag_timeseries_volume_average_vs_WOA/no3 in process [24130] 2022-01-18 11:27:03,657 UTC [24131] INFO esmvalcore._task:250 Starting task diag_timeseries_volume_average_vs_WOA/o2 in process [24131] 2022-01-18 11:27:03,658 UTC [24132] INFO esmvalcore._task:250 Starting task diag_timeseries_volume_average_vs_WOA/si in process [24132] 2022-01-18 11:27:03,659 UTC [24133] INFO esmvalcore._task:250 Starting task diag_timeseries_volume_average_no_obs/chl in process [24133] 2022-01-18 11:27:03,661 UTC [24134] INFO esmvalcore._task:250 Starting task diag_timeseries_volume_average_no_obs/dfe in process [24134] 2022-01-18 11:27:03,663 UTC [24135] INFO esmvalcore._task:250 Starting task diag_timeseries_volume_average_no_obs/talk in process [24135] 2022-01-18 11:27:03,664 UTC [24128] DEBUG esmvalcore.preprocessor:537 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables'] 2022-01-18 11:27:03,664 UTC [24130] DEBUG esmvalcore.preprocessor:537 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables'] 2022-01-18 11:27:03,665 UTC [24131] DEBUG esmvalcore.preprocessor:537 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables'] 2022-01-18 11:27:03,664 UTC [24128] DEBUG esmvalcore.preprocessor:544 Applying single-model steps to PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2022-01-18 11:27:03,665 UTC [24129] DEBUG esmvalcore.preprocessor:537 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables'] 2022-01-18 11:27:03,665 UTC [24128] DEBUG esmvalcore.preprocessor:332 Running preprocessor step fix_file 2022-01-18 11:27:03,664 UTC [24130] DEBUG esmvalcore.preprocessor:544 Applying single-model steps to PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2022-01-18 11:27:03,665 UTC [24130] DEBUG esmvalcore.preprocessor:332 Running preprocessor step fix_file 2022-01-18 11:27:03,665 UTC [24131] DEBUG esmvalcore.preprocessor:544 Applying single-model steps to PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2022-01-18 11:27:03,665 UTC [24131] DEBUG esmvalcore.preprocessor:332 Running preprocessor step fix_file 2022-01-18 11:27:03,666 UTC [24128] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'fix_file' on the data '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = 'output1', timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', output_dir = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed' 2022-01-18 11:27:03,665 UTC [24129] DEBUG esmvalcore.preprocessor:544 Applying single-model steps to PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2022-01-18 11:27:03,666 UTC [24129] DEBUG esmvalcore.preprocessor:332 Running preprocessor step fix_file 2022-01-18 11:27:03,666 UTC [24130] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'fix_file' on the data '/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = 'output1', timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', output_dir = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed' 2022-01-18 11:27:03,666 UTC [24132] DEBUG esmvalcore.preprocessor:537 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables'] 2022-01-18 11:27:03,666 UTC [24131] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'fix_file' on the data '/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = 'output1', timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', output_dir = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed' 2022-01-18 11:27:03,666 UTC [24129] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'fix_file' on the data '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = 'output1', timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', output_dir = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed' 2022-01-18 11:27:03,666 UTC [24132] DEBUG esmvalcore.preprocessor:544 Applying single-model steps to PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2022-01-18 11:27:03,667 UTC [24132] DEBUG esmvalcore.preprocessor:332 Running preprocessor step fix_file 2022-01-18 11:27:03,667 UTC [24133] DEBUG esmvalcore.preprocessor:537 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables'] 2022-01-18 11:27:03,667 UTC [24132] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'fix_file' on the data '/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = 'output1', timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', output_dir = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed' 2022-01-18 11:27:03,668 UTC [24134] DEBUG esmvalcore.preprocessor:537 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables'] 2022-01-18 11:27:03,667 UTC [24133] DEBUG esmvalcore.preprocessor:544 Applying single-model steps to PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2022-01-18 11:27:03,669 UTC [24133] DEBUG esmvalcore.preprocessor:332 Running preprocessor step fix_file 2022-01-18 11:27:03,668 UTC [24134] DEBUG esmvalcore.preprocessor:544 Applying single-model steps to PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2022-01-18 11:27:03,670 UTC [24135] DEBUG esmvalcore.preprocessor:537 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables'] 2022-01-18 11:27:03,670 UTC [24133] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'fix_file' on the data '/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'chl', short_name = 'chl', diagnostic = 'diag_timeseries_volume_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = 'output1', timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'chl', standard_name = 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', long_name = 'Total Chlorophyll Mass Concentration', units = 'kg m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', output_dir = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed' 2022-01-18 11:27:03,670 UTC [24134] DEBUG esmvalcore.preprocessor:332 Running preprocessor step fix_file 2022-01-18 11:27:03,670 UTC [24131] DEBUG esmvalcore.preprocessor:332 Running preprocessor step load 2022-01-18 11:27:03,670 UTC [24130] DEBUG esmvalcore.preprocessor:332 Running preprocessor step load 2022-01-18 11:27:03,670 UTC [24128] DEBUG esmvalcore.preprocessor:332 Running preprocessor step load 2022-01-18 11:27:03,670 UTC [24129] DEBUG esmvalcore.preprocessor:332 Running preprocessor step load 2022-01-18 11:27:03,670 UTC [24131] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'load' on the data '/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2022-01-18 11:27:03,670 UTC [24130] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'load' on the data '/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2022-01-18 11:27:03,670 UTC [24128] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'load' on the data '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) callback = 2022-01-18 11:27:03,670 UTC [24130] DEBUG esmvalcore.preprocessor._io:115 Loading: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:03,670 UTC [24131] DEBUG esmvalcore.preprocessor._io:115 Loading: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:03,670 UTC [24129] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'load' on the data '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) callback = 2022-01-18 11:27:03,671 UTC [24128] DEBUG esmvalcore.preprocessor._io:115 Loading: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2022-01-18 11:27:03,671 UTC [24129] DEBUG esmvalcore.preprocessor._io:115 Loading: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2022-01-18 11:27:03,671 UTC [24132] DEBUG esmvalcore.preprocessor:332 Running preprocessor step load 2022-01-18 11:27:03,671 UTC [24134] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'fix_file' on the data '/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'dfe', short_name = 'dfe', diagnostic = 'diag_timeseries_volume_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = 'output1', timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'dfe', standard_name = 'mole_concentration_of_dissolved_iron_in_sea_water', long_name = 'Dissolved Iron Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', output_dir = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed' 2022-01-18 11:27:03,671 UTC [24132] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'load' on the data '/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2022-01-18 11:27:03,670 UTC [24135] DEBUG esmvalcore.preprocessor:544 Applying single-model steps to PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc 2022-01-18 11:27:03,672 UTC [24132] DEBUG esmvalcore.preprocessor._io:115 Loading: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:03,672 UTC [24135] DEBUG esmvalcore.preprocessor:332 Running preprocessor step fix_file 2022-01-18 11:27:03,673 UTC [24135] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'fix_file' on the data '/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'talk', short_name = 'talk', diagnostic = 'diag_timeseries_volume_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = 'output1', timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'talk', standard_name = 'sea_water_alkalinity_expressed_as_mole_equivalent', long_name = 'Total Alkalinity', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', output_dir = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed' 2022-01-18 11:27:03,675 UTC [24133] DEBUG esmvalcore.preprocessor:332 Running preprocessor step load 2022-01-18 11:27:03,675 UTC [24133] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'load' on the data '/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2022-01-18 11:27:03,675 UTC [24133] DEBUG esmvalcore.preprocessor._io:115 Loading: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:03,676 UTC [24134] DEBUG esmvalcore.preprocessor:332 Running preprocessor step load 2022-01-18 11:27:03,676 UTC [24134] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'load' on the data '/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2022-01-18 11:27:03,676 UTC [24134] DEBUG esmvalcore.preprocessor._io:115 Loading: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:03,677 UTC [24135] DEBUG esmvalcore.preprocessor:332 Running preprocessor step load 2022-01-18 11:27:03,677 UTC [24135] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'load' on the data '/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2022-01-18 11:27:03,677 UTC [24135] DEBUG esmvalcore.preprocessor._io:115 Loading: /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:03,746 UTC [24125] INFO esmvalcore._task:763 Progress: 8 tasks running, 49 tasks waiting for ancestors, 0/57 done 2022-01-18 11:27:03,892 UTC [24130] DEBUG esmvalcore.preprocessor._io:130 Done with loading /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:03,892 UTC [24134] DEBUG esmvalcore.preprocessor._io:130 Done with loading /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:03,892 UTC [24132] DEBUG esmvalcore.preprocessor._io:130 Done with loading /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:03,892 UTC [24130] DEBUG esmvalcore.preprocessor:332 Running preprocessor step fix_metadata 2022-01-18 11:27:03,892 UTC [24132] DEBUG esmvalcore.preprocessor:332 Running preprocessor step fix_metadata 2022-01-18 11:27:03,892 UTC [24134] DEBUG esmvalcore.preprocessor:332 Running preprocessor step fix_metadata 2022-01-18 11:27:03,896 UTC [24131] DEBUG esmvalcore.preprocessor._io:130 Done with loading /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:03,896 UTC [24131] DEBUG esmvalcore.preprocessor:332 Running preprocessor step fix_metadata 2022-01-18 11:27:03,896 UTC [24135] DEBUG esmvalcore.preprocessor._io:130 Done with loading /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:03,896 UTC [24128] DEBUG esmvalcore.preprocessor._io:130 Done with loading /mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2022-01-18 11:27:03,897 UTC [24135] DEBUG esmvalcore.preprocessor:332 Running preprocessor step fix_metadata 2022-01-18 11:27:03,897 UTC [24128] DEBUG esmvalcore.preprocessor:332 Running preprocessor step fix_metadata 2022-01-18 11:27:03,898 UTC [24133] DEBUG esmvalcore.preprocessor._io:130 Done with loading /home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2022-01-18 11:27:03,898 UTC [24133] DEBUG esmvalcore.preprocessor:332 Running preprocessor step fix_metadata 2022-01-18 11:27:03,904 UTC [24132] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = 'output1', timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', check_level = 2022-01-18 11:27:03,904 UTC [24134] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'dfe', short_name = 'dfe', diagnostic = 'diag_timeseries_volume_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = 'output1', timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'dfe', standard_name = 'mole_concentration_of_dissolved_iron_in_sea_water', long_name = 'Dissolved Iron Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', check_level = 2022-01-18 11:27:03,907 UTC [24131] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = 'output1', timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', check_level = 2022-01-18 11:27:03,908 UTC [24135] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'talk', short_name = 'talk', diagnostic = 'diag_timeseries_volume_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = 'output1', timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'talk', standard_name = 'sea_water_alkalinity_expressed_as_mole_equivalent', long_name = 'Total Alkalinity', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', check_level = 2022-01-18 11:27:03,909 UTC [24130] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = 'output1', timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', check_level = 2022-01-18 11:27:03,910 UTC [24133] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'chl', short_name = 'chl', diagnostic = 'diag_timeseries_volume_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = 'output1', timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'chl', standard_name = 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', long_name = 'Total Chlorophyll Mass Concentration', units = 'kg m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', check_level = 2022-01-18 11:27:03,914 UTC [24128] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = 'output1', timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', check_level = 2022-01-18 11:27:03,940 UTC [24134] DEBUG esmvalcore.preprocessor:332 Running preprocessor step concatenate 2022-01-18 11:27:03,940 UTC [24132] DEBUG esmvalcore.preprocessor:332 Running preprocessor step concatenate 2022-01-18 11:27:03,943 UTC [24131] DEBUG esmvalcore.preprocessor:332 Running preprocessor step concatenate 2022-01-18 11:27:03,943 UTC [24135] DEBUG esmvalcore.preprocessor:332 Running preprocessor step concatenate 2022-01-18 11:27:03,944 UTC [24130] DEBUG esmvalcore.preprocessor:332 Running preprocessor step concatenate 2022-01-18 11:27:03,946 UTC [24132] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2022-01-18 11:27:03,947 UTC [24132] DEBUG esmvalcore.preprocessor:332 Running preprocessor step cmor_check_metadata 2022-01-18 11:27:03,947 UTC [24134] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2022-01-18 11:27:03,947 UTC [24134] DEBUG esmvalcore.preprocessor:332 Running preprocessor step cmor_check_metadata 2022-01-18 11:27:03,949 UTC [24131] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2022-01-18 11:27:03,949 UTC [24131] DEBUG esmvalcore.preprocessor:332 Running preprocessor step cmor_check_metadata 2022-01-18 11:27:03,949 UTC [24133] DEBUG esmvalcore.preprocessor:332 Running preprocessor step concatenate 2022-01-18 11:27:03,950 UTC [24132] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2022-01-18 11:27:03,950 UTC [24134] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'dfe', frequency = 'yr', check_level = 2022-01-18 11:27:03,950 UTC [24135] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2022-01-18 11:27:03,950 UTC [24135] DEBUG esmvalcore.preprocessor:332 Running preprocessor step cmor_check_metadata 2022-01-18 11:27:03,951 UTC [24130] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2022-01-18 11:27:03,951 UTC [24130] DEBUG esmvalcore.preprocessor:332 Running preprocessor step cmor_check_metadata 2022-01-18 11:27:03,953 UTC [24131] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2022-01-18 11:27:03,953 UTC [24135] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'talk', frequency = 'yr', check_level = 2022-01-18 11:27:03,954 UTC [24130] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2022-01-18 11:27:03,957 UTC [24133] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2022-01-18 11:27:03,957 UTC [24133] DEBUG esmvalcore.preprocessor:332 Running preprocessor step cmor_check_metadata 2022-01-18 11:27:03,961 UTC [24133] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'chl', frequency = 'yr', check_level = 2022-01-18 11:27:03,972 UTC [24128] DEBUG esmvalcore.preprocessor:332 Running preprocessor step concatenate 2022-01-18 11:27:03,978 UTC [24128] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2022-01-18 11:27:03,978 UTC [24128] DEBUG esmvalcore.preprocessor:332 Running preprocessor step cmor_check_metadata 2022-01-18 11:27:03,981 UTC [24128] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2022-01-18 11:27:03,981 UTC [24134] DEBUG esmvalcore.preprocessor:332 Running preprocessor step clip_timerange 2022-01-18 11:27:03,981 UTC [24132] DEBUG esmvalcore.preprocessor:332 Running preprocessor step clip_timerange 2022-01-18 11:27:03,984 UTC [24131] DEBUG esmvalcore.preprocessor:332 Running preprocessor step clip_timerange 2022-01-18 11:27:03,984 UTC [24134] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2022-01-18 11:27:03,984 UTC [24132] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2022-01-18 11:27:03,986 UTC [24130] DEBUG esmvalcore.preprocessor:332 Running preprocessor step clip_timerange 2022-01-18 11:27:03,987 UTC [24131] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2022-01-18 11:27:03,988 UTC [24135] DEBUG esmvalcore.preprocessor:332 Running preprocessor step clip_timerange 2022-01-18 11:27:03,989 UTC [24130] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2022-01-18 11:27:03,992 UTC [24135] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2022-01-18 11:27:03,997 UTC [24133] DEBUG esmvalcore.preprocessor:332 Running preprocessor step clip_timerange 2022-01-18 11:27:04,000 UTC [24133] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2022-01-18 11:27:04,005 UTC [24134] DEBUG esmvalcore.preprocessor:332 Running preprocessor step fix_data 2022-01-18 11:27:04,005 UTC [24132] DEBUG esmvalcore.preprocessor:332 Running preprocessor step fix_data 2022-01-18 11:27:04,008 UTC [24131] DEBUG esmvalcore.preprocessor:332 Running preprocessor step fix_data 2022-01-18 11:27:04,009 UTC [24134] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'dfe', short_name = 'dfe', diagnostic = 'diag_timeseries_volume_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = 'output1', timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'dfe', standard_name = 'mole_concentration_of_dissolved_iron_in_sea_water', long_name = 'Dissolved Iron Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', check_level = 2022-01-18 11:27:04,009 UTC [24132] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = 'output1', timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', check_level = 2022-01-18 11:27:04,009 UTC [24134] DEBUG esmvalcore.preprocessor:332 Running preprocessor step cmor_check_data 2022-01-18 11:27:04,009 UTC [24132] DEBUG esmvalcore.preprocessor:332 Running preprocessor step cmor_check_data 2022-01-18 11:27:04,010 UTC [24130] DEBUG esmvalcore.preprocessor:332 Running preprocessor step fix_data 2022-01-18 11:27:04,011 UTC [24131] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = 'output1', timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', check_level = 2022-01-18 11:27:04,012 UTC [24131] DEBUG esmvalcore.preprocessor:332 Running preprocessor step cmor_check_data 2022-01-18 11:27:04,012 UTC [24132] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2022-01-18 11:27:04,012 UTC [24134] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'dfe', frequency = 'yr', check_level = 2022-01-18 11:27:04,013 UTC [24132] DEBUG esmvalcore.preprocessor:332 Running preprocessor step add_fx_variables 2022-01-18 11:27:04,013 UTC [24134] DEBUG esmvalcore.preprocessor:332 Running preprocessor step add_fx_variables 2022-01-18 11:27:04,013 UTC [24130] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = 'output1', timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', check_level = 2022-01-18 11:27:04,013 UTC [24130] DEBUG esmvalcore.preprocessor:332 Running preprocessor step cmor_check_data 2022-01-18 11:27:04,015 UTC [24131] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2022-01-18 11:27:04,015 UTC [24135] DEBUG esmvalcore.preprocessor:332 Running preprocessor step fix_data 2022-01-18 11:27:04,016 UTC [24131] DEBUG esmvalcore.preprocessor:332 Running preprocessor step add_fx_variables 2022-01-18 11:27:04,016 UTC [24132] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'volcello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}, check_level = 2022-01-18 11:27:04,016 UTC [24134] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'volcello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}, check_level = 2022-01-18 11:27:04,016 UTC [24132] DEBUG esmvalcore.preprocessor._io:115 Loading: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2022-01-18 11:27:04,016 UTC [24134] DEBUG esmvalcore.preprocessor._io:115 Loading: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2022-01-18 11:27:04,016 UTC [24130] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2022-01-18 11:27:04,017 UTC [24130] DEBUG esmvalcore.preprocessor:332 Running preprocessor step add_fx_variables 2022-01-18 11:27:04,019 UTC [24131] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'volcello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}, check_level = 2022-01-18 11:27:04,019 UTC [24131] DEBUG esmvalcore.preprocessor._io:115 Loading: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2022-01-18 11:27:04,019 UTC [24135] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'talk', short_name = 'talk', diagnostic = 'diag_timeseries_volume_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = 'output1', timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'talk', standard_name = 'sea_water_alkalinity_expressed_as_mole_equivalent', long_name = 'Total Alkalinity', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', check_level = 2022-01-18 11:27:04,020 UTC [24135] DEBUG esmvalcore.preprocessor:332 Running preprocessor step cmor_check_data 2022-01-18 11:27:04,020 UTC [24130] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'volcello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}, check_level = 2022-01-18 11:27:04,020 UTC [24130] DEBUG esmvalcore.preprocessor._io:115 Loading: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2022-01-18 11:27:04,023 UTC [24135] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'talk', frequency = 'yr', check_level = 2022-01-18 11:27:04,024 UTC [24135] DEBUG esmvalcore.preprocessor:332 Running preprocessor step add_fx_variables 2022-01-18 11:27:04,024 UTC [24133] DEBUG esmvalcore.preprocessor:332 Running preprocessor step fix_data 2022-01-18 11:27:04,028 UTC [24135] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'volcello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}, check_level = 2022-01-18 11:27:04,028 UTC [24135] DEBUG esmvalcore.preprocessor._io:115 Loading: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2022-01-18 11:27:04,028 UTC [24133] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'chl', short_name = 'chl', diagnostic = 'diag_timeseries_volume_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = 'output1', timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'chl', standard_name = 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', long_name = 'Total Chlorophyll Mass Concentration', units = 'kg m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', check_level = 2022-01-18 11:27:04,028 UTC [24134] DEBUG esmvalcore.preprocessor._io:130 Done with loading /mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2022-01-18 11:27:04,028 UTC [24132] DEBUG esmvalcore.preprocessor._io:130 Done with loading /mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2022-01-18 11:27:04,029 UTC [24133] DEBUG esmvalcore.preprocessor:332 Running preprocessor step cmor_check_data 2022-01-18 11:27:04,030 UTC [24128] DEBUG esmvalcore.preprocessor:332 Running preprocessor step clip_timerange 2022-01-18 11:27:04,030 UTC [24131] DEBUG esmvalcore.preprocessor._io:130 Done with loading /mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2022-01-18 11:27:04,031 UTC [24132] DEBUG esmvalcore.preprocessor._ancillary_vars:100 Added volcello as cell measure in cube of si. 2022-01-18 11:27:04,031 UTC [24134] DEBUG esmvalcore.preprocessor._ancillary_vars:100 Added volcello as cell measure in cube of dfe. 2022-01-18 11:27:04,031 UTC [24132] DEBUG esmvalcore.preprocessor:332 Running preprocessor step volume_statistics 2022-01-18 11:27:04,031 UTC [24134] DEBUG esmvalcore.preprocessor:332 Running preprocessor step volume_statistics 2022-01-18 11:27:04,031 UTC [24130] DEBUG esmvalcore.preprocessor._io:130 Done with loading /mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2022-01-18 11:27:04,032 UTC [24133] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'chl', frequency = 'yr', check_level = 2022-01-18 11:27:04,033 UTC [24131] DEBUG esmvalcore.preprocessor._ancillary_vars:100 Added volcello as cell measure in cube of o2. 2022-01-18 11:27:04,033 UTC [24133] DEBUG esmvalcore.preprocessor:332 Running preprocessor step add_fx_variables 2022-01-18 11:27:04,033 UTC [24131] DEBUG esmvalcore.preprocessor:332 Running preprocessor step volume_statistics 2022-01-18 11:27:04,033 UTC [24128] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) timerange = '2001/2004' 2022-01-18 11:27:04,034 UTC [24130] DEBUG esmvalcore.preprocessor._ancillary_vars:100 Added volcello as cell measure in cube of no3. 2022-01-18 11:27:04,034 UTC [24130] DEBUG esmvalcore.preprocessor:332 Running preprocessor step volume_statistics 2022-01-18 11:27:04,037 UTC [24133] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'volcello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}, check_level = 2022-01-18 11:27:04,037 UTC [24133] DEBUG esmvalcore.preprocessor._io:115 Loading: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2022-01-18 11:27:04,040 UTC [24135] DEBUG esmvalcore.preprocessor._io:130 Done with loading /mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2022-01-18 11:27:04,043 UTC [24135] DEBUG esmvalcore.preprocessor._ancillary_vars:100 Added volcello as cell measure in cube of talk. 2022-01-18 11:27:04,043 UTC [24135] DEBUG esmvalcore.preprocessor:332 Running preprocessor step volume_statistics 2022-01-18 11:27:04,049 UTC [24133] DEBUG esmvalcore.preprocessor._io:130 Done with loading /mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2022-01-18 11:27:04,051 UTC [24133] DEBUG esmvalcore.preprocessor._ancillary_vars:100 Added volcello as cell measure in cube of chl. 2022-01-18 11:27:04,051 UTC [24133] DEBUG esmvalcore.preprocessor:332 Running preprocessor step volume_statistics 2022-01-18 11:27:04,062 UTC [24128] DEBUG esmvalcore.preprocessor:332 Running preprocessor step fix_data 2022-01-18 11:27:04,066 UTC [24128] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = 'output1', timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', check_level = 2022-01-18 11:27:04,066 UTC [24128] DEBUG esmvalcore.preprocessor:332 Running preprocessor step cmor_check_data 2022-01-18 11:27:04,070 UTC [24128] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2022-01-18 11:27:04,070 UTC [24128] DEBUG esmvalcore.preprocessor:332 Running preprocessor step add_fx_variables 2022-01-18 11:27:04,074 UTC [24128] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) fx_variables = {'volcello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}, check_level = 2022-01-18 11:27:04,074 UTC [24128] DEBUG esmvalcore.preprocessor._io:115 Loading: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2022-01-18 11:27:04,081 UTC [24131] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'volume_statistics' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2022-01-18 11:27:04,082 UTC [24132] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'volume_statistics' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2022-01-18 11:27:04,082 UTC [24134] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'volume_statistics' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2022-01-18 11:27:04,086 UTC [24128] DEBUG esmvalcore.preprocessor._io:130 Done with loading /mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2022-01-18 11:27:04,086 UTC [24130] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'volume_statistics' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2022-01-18 11:27:04,089 UTC [24128] DEBUG esmvalcore.preprocessor._ancillary_vars:100 Added volcello as cell measure in cube of thetao. 2022-01-18 11:27:04,089 UTC [24128] DEBUG esmvalcore.preprocessor:332 Running preprocessor step volume_statistics 2022-01-18 11:27:04,098 UTC [24135] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'volume_statistics' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2022-01-18 11:27:04,101 UTC [24133] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'volume_statistics' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2022-01-18 11:27:04,144 UTC [24128] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'volume_statistics' on the data loaded from original input file(s) ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) operator = 'mean' 2022-01-18 11:27:04,669 UTC [24129] DEBUG esmvalcore.preprocessor._io:130 Done with loading /mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2022-01-18 11:27:04,669 UTC [24129] DEBUG esmvalcore.preprocessor:332 Running preprocessor step fix_metadata 2022-01-18 11:27:04,680 UTC [24129] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = 'output1', timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', check_level = 2022-01-18 11:27:04,733 UTC [24129] DEBUG esmvalcore.preprocessor:332 Running preprocessor step concatenate 2022-01-18 11:27:04,740 UTC [24129] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2022-01-18 11:27:04,740 UTC [24129] DEBUG esmvalcore.preprocessor:332 Running preprocessor step cmor_check_metadata 2022-01-18 11:27:04,744 UTC [24129] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2022-01-18 11:27:04,794 UTC [24129] DEBUG esmvalcore.preprocessor:332 Running preprocessor step clip_timerange 2022-01-18 11:27:04,798 UTC [24129] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) timerange = '2001/2004' 2022-01-18 11:27:04,828 UTC [24129] DEBUG esmvalcore.preprocessor:332 Running preprocessor step fix_data 2022-01-18 11:27:04,832 UTC [24129] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = 'output1', timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', check_level = 2022-01-18 11:27:04,832 UTC [24129] DEBUG esmvalcore.preprocessor:332 Running preprocessor step cmor_check_data 2022-01-18 11:27:04,836 UTC [24129] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2022-01-18 11:27:04,837 UTC [24129] DEBUG esmvalcore.preprocessor:332 Running preprocessor step add_fx_variables 2022-01-18 11:27:04,840 UTC [24129] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) fx_variables = {'volcello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': 'output1', 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}, check_level = 2022-01-18 11:27:04,840 UTC [24129] DEBUG esmvalcore.preprocessor._io:115 Loading: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2022-01-18 11:27:04,854 UTC [24129] DEBUG esmvalcore.preprocessor._io:130 Done with loading /mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2022-01-18 11:27:04,857 UTC [24129] DEBUG esmvalcore.preprocessor._ancillary_vars:100 Added volcello as cell measure in cube of so. 2022-01-18 11:27:04,857 UTC [24129] DEBUG esmvalcore.preprocessor:332 Running preprocessor step volume_statistics 2022-01-18 11:27:04,914 UTC [24129] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'volume_statistics' on the data loaded from original input file(s) ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/CMIP5_DKRZ/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) operator = 'mean' 2022-01-18 11:27:14,389 UTC [24131] DEBUG esmvalcore.preprocessor:332 Running preprocessor step remove_fx_variables 2022-01-18 11:27:14,391 UTC [24131] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2022-01-18 11:27:14,391 UTC [24131] DEBUG esmvalcore.preprocessor:332 Running preprocessor step save 2022-01-18 11:27:14,394 UTC [24131] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc' 2022-01-18 11:27:14,396 UTC [24131] DEBUG esmvalcore.preprocessor._io:270 Saving cubes [] to /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2022-01-18 11:27:14,420 UTC [24131] DEBUG esmvalcore.preprocessor:332 Running preprocessor step cleanup 2022-01-18 11:27:14,421 UTC [24131] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'cleanup' on the data ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'] loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed'] 2022-01-18 11:27:14,545 UTC [24130] DEBUG esmvalcore.preprocessor:332 Running preprocessor step remove_fx_variables 2022-01-18 11:27:14,547 UTC [24130] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2022-01-18 11:27:14,548 UTC [24130] DEBUG esmvalcore.preprocessor:332 Running preprocessor step save 2022-01-18 11:27:14,550 UTC [24130] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc' 2022-01-18 11:27:14,552 UTC [24130] DEBUG esmvalcore.preprocessor._io:270 Saving cubes [] to /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2022-01-18 11:27:14,586 UTC [24130] DEBUG esmvalcore.preprocessor:332 Running preprocessor step cleanup 2022-01-18 11:27:14,586 UTC [24130] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'cleanup' on the data ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'] loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed'] 2022-01-18 11:27:14,637 UTC [24131] DEBUG esmvalcore.preprocessor:544 Applying single-model steps to PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2022-01-18 11:27:14,637 UTC [24131] DEBUG esmvalcore.preprocessor:332 Running preprocessor step fix_file 2022-01-18 11:27:14,638 UTC [24131] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'fix_file' on the data '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', output_dir = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed' 2022-01-18 11:27:14,638 UTC [24131] DEBUG esmvalcore.preprocessor:332 Running preprocessor step load 2022-01-18 11:27:14,638 UTC [24131] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'load' on the data '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) callback = 2022-01-18 11:27:14,638 UTC [24131] DEBUG esmvalcore.preprocessor._io:115 Loading: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2022-01-18 11:27:14,661 UTC [24131] DEBUG esmvalcore.preprocessor._io:130 Done with loading /mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2022-01-18 11:27:14,661 UTC [24131] DEBUG esmvalcore.preprocessor:332 Running preprocessor step fix_metadata 2022-01-18 11:27:14,667 UTC [24131] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', check_level = 2022-01-18 11:27:14,669 UTC [24131] DEBUG esmvalcore.preprocessor:332 Running preprocessor step concatenate 2022-01-18 11:27:14,675 UTC [24131] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) 2022-01-18 11:27:14,675 UTC [24131] DEBUG esmvalcore.preprocessor:332 Running preprocessor step cmor_check_metadata 2022-01-18 11:27:14,678 UTC [24131] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2022-01-18 11:27:14,679 UTC [24131] DEBUG esmvalcore.preprocessor:332 Running preprocessor step clip_timerange 2022-01-18 11:27:14,683 UTC [24131] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2022-01-18 11:27:14,688 UTC [24131] DEBUG esmvalcore.preprocessor:332 Running preprocessor step fix_data 2022-01-18 11:27:14,692 UTC [24131] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', check_level = 2022-01-18 11:27:14,693 UTC [24131] DEBUG esmvalcore.preprocessor:332 Running preprocessor step cmor_check_data 2022-01-18 11:27:14,696 UTC [24131] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2022-01-18 11:27:14,697 UTC [24131] DEBUG esmvalcore.preprocessor:332 Running preprocessor step add_fx_variables 2022-01-18 11:27:14,700 UTC [24131] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2022-01-18 11:27:14,701 UTC [24131] DEBUG esmvalcore.preprocessor:332 Running preprocessor step volume_statistics 2022-01-18 11:27:14,704 UTC [24131] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'volume_statistics' on the data loaded from original input file(s) ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) operator = 'mean' 2022-01-18 11:27:14,710 UTC [24131] ERROR esmvalcore.preprocessor:323 Failed to run preprocessor function 'volume_statistics' on the data [] loaded from original input file(s) ['/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) operator = 'mean' 2022-01-18 11:27:14,751 UTC [24130] DEBUG esmvalcore.preprocessor:544 Applying single-model steps to PreprocessorFile: /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2022-01-18 11:27:14,751 UTC [24130] DEBUG esmvalcore.preprocessor:332 Running preprocessor step fix_file 2022-01-18 11:27:14,751 UTC [24130] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'fix_file' on the data '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', output_dir = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed' 2022-01-18 11:27:14,752 UTC [24130] DEBUG esmvalcore.preprocessor:332 Running preprocessor step load 2022-01-18 11:27:14,752 UTC [24130] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'load' on the data '/mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) callback = 2022-01-18 11:27:14,752 UTC [24130] DEBUG esmvalcore.preprocessor._io:115 Loading: /mnt/lustre02/work/bd0854/DATA/ESMValTool2/OBS/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2022-01-18 11:27:14,754 UTC [24133] DEBUG esmvalcore.preprocessor:332 Running preprocessor step remove_fx_variables 2022-01-18 11:27:14,756 UTC [24133] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2022-01-18 11:27:14,756 UTC [24133] DEBUG esmvalcore.preprocessor:332 Running preprocessor step save 2022-01-18 11:27:14,759 UTC [24133] DEBUG esmvalcore.preprocessor:293 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/home/b/b309141/work/downloaded_data/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc' 2022-01-18 11:27:14,760 UTC [24133] DEBUG esmvalcore.preprocessor._io:270 Saving cubes [] to /scratch/b/b309141/work_v2/recipe_ocean_bgc_20220118_112658/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2022-01-18 11:27:15,597 UTC [24125] INFO esmvalcore._task:127 Maximum memory used (estimate): 5.3 GB 2022-01-18 11:27:15,598 UTC [24125] INFO esmvalcore._task:129 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2022-01-18 11:27:15,600 UTC [24125] ERROR esmvalcore._main:488 Program terminated abnormally, see stack trace below for more information: multiprocessing.pool.RemoteTraceback: """ Traceback (most recent call last): File "/mnt/lustre02/work/bd0854/b309141/mambaforge/envs/esm/lib/python3.9/multiprocessing/pool.py", line 125, in worker result = (True, func(*args, **kwds)) File "/mnt/lustre02/work/bd0854/b309141/repos/ESMValCore/esmvalcore/_task.py", line 780, in _run_task output_files = task.run() File "/mnt/lustre02/work/bd0854/b309141/repos/ESMValCore/esmvalcore/_task.py", line 253, in run self.output_files = self._run(input_files) File "/mnt/lustre02/work/bd0854/b309141/repos/ESMValCore/esmvalcore/preprocessor/__init__.py", line 547, in _run product.apply(step, self.debug) File "/mnt/lustre02/work/bd0854/b309141/repos/ESMValCore/esmvalcore/preprocessor/__init__.py", line 407, in apply self.cubes = preprocess(self.cubes, step, File "/mnt/lustre02/work/bd0854/b309141/repos/ESMValCore/esmvalcore/preprocessor/__init__.py", line 342, in preprocess result.append(_run_preproc_function(function, item, settings, File "/mnt/lustre02/work/bd0854/b309141/repos/ESMValCore/esmvalcore/preprocessor/__init__.py", line 298, in _run_preproc_function return function(items, **kwargs) File "/mnt/lustre02/work/bd0854/b309141/repos/ESMValCore/esmvalcore/preprocessor/_volume.py", line 203, in volume_statistics t_dim = cube.coord_dims('time')[0] IndexError: tuple index out of range """ The above exception was the direct cause of the following exception: Traceback (most recent call last): File "/mnt/lustre02/work/bd0854/b309141/repos/ESMValCore/esmvalcore/_main.py", line 476, in run fire.Fire(ESMValTool()) File "/mnt/lustre02/work/bd0854/b309141/mambaforge/envs/esm/lib/python3.9/site-packages/fire/core.py", line 141, in Fire component_trace = _Fire(component, args, parsed_flag_args, context, name) File "/mnt/lustre02/work/bd0854/b309141/mambaforge/envs/esm/lib/python3.9/site-packages/fire/core.py", line 466, in _Fire component, remaining_args = _CallAndUpdateTrace( File "/mnt/lustre02/work/bd0854/b309141/mambaforge/envs/esm/lib/python3.9/site-packages/fire/core.py", line 681, in _CallAndUpdateTrace component = fn(*varargs, **kwargs) File "/mnt/lustre02/work/bd0854/b309141/repos/ESMValCore/esmvalcore/_main.py", line 420, in run process_recipe(recipe_file=recipe, config_user=cfg) File "/mnt/lustre02/work/bd0854/b309141/repos/ESMValCore/esmvalcore/_main.py", line 124, in process_recipe recipe.run() File "/mnt/lustre02/work/bd0854/b309141/repos/ESMValCore/esmvalcore/_recipe.py", line 1691, in run self.tasks.run(max_parallel_tasks=self._cfg['max_parallel_tasks']) File "/mnt/lustre02/work/bd0854/b309141/repos/ESMValCore/esmvalcore/_task.py", line 709, in run self._run_parallel(max_parallel_tasks) File "/mnt/lustre02/work/bd0854/b309141/repos/ESMValCore/esmvalcore/_task.py", line 752, in _run_parallel _copy_results(task, running[task]) File "/mnt/lustre02/work/bd0854/b309141/repos/ESMValCore/esmvalcore/_task.py", line 775, in _copy_results task.output_files, task.products = future.get() File "/mnt/lustre02/work/bd0854/b309141/mambaforge/envs/esm/lib/python3.9/multiprocessing/pool.py", line 771, in get raise self._value File "/mnt/lustre02/work/bd0854/b309141/mambaforge/envs/esm/lib/python3.9/multiprocessing/pool.py", line 125, in worker result = (True, func(*args, **kwds)) File "/mnt/lustre02/work/bd0854/b309141/repos/ESMValCore/esmvalcore/_task.py", line 780, in _run_task output_files = task.run() File "/mnt/lustre02/work/bd0854/b309141/repos/ESMValCore/esmvalcore/_task.py", line 253, in run self.output_files = self._run(input_files) File "/mnt/lustre02/work/bd0854/b309141/repos/ESMValCore/esmvalcore/preprocessor/__init__.py", line 547, in _run product.apply(step, self.debug) File "/mnt/lustre02/work/bd0854/b309141/repos/ESMValCore/esmvalcore/preprocessor/__init__.py", line 407, in apply self.cubes = preprocess(self.cubes, step, File "/mnt/lustre02/work/bd0854/b309141/repos/ESMValCore/esmvalcore/preprocessor/__init__.py", line 342, in preprocess result.append(_run_preproc_function(function, item, settings, File "/mnt/lustre02/work/bd0854/b309141/repos/ESMValCore/esmvalcore/preprocessor/__init__.py", line 298, in _run_preproc_function return function(items, **kwargs) File "/mnt/lustre02/work/bd0854/b309141/repos/ESMValCore/esmvalcore/preprocessor/_volume.py", line 203, in volume_statistics t_dim = cube.coord_dims('time')[0] IndexError: tuple index out of range 2022-01-18 11:27:15,608 UTC [24125] INFO esmvalcore._main:492 If you have a question or need help, please start a new discussion on https://github.com/ESMValGroup/ESMValTool/discussions If you suspect this is a bug, please open an issue on https://github.com/ESMValGroup/ESMValTool/issues To make it easier to find out what the problem is, please consider attaching the files run/recipe_*.yml and run/main_log_debug.txt from the output directory.