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Fixing a regression from commit 93fc9bc. Now that we preserve empty s…
…tdout/err lines from scons pipes, we need to erase for the iceprog progress percentage two lines instead of one. I don't have Fumo and Tinyprog boards to test if this affect them as well so added TODOs to test and apply the same change if needed. Alhambra II upload (Iceprog) was tested successfuly.
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