An interactive neuron analyzer.
EspINA is a user-friendly tool which performs segmentation and analysis of elements in a reconstructed 3D volume of the brain, and greatly facilitates and accelerates these processes. It allows visualization and segmentation of large image stacks datasets, both from electron microscopy (e.g. FIB/SEM) and confocal laser microscopy.
You can find a much more detailed description of EspINA in its official webpage. You can see some videos of EspINA here.
If you have used EspINA to get your results and you have published them (congratulations!!) please, let us know and your publication will also appear here.
EspINA uses several external libraries, namely:
To compile EspINA you'll need:
Download and install the latest build from the releases page.
EspINA is and open source software developed by the Universidad Politécnica de Madrid and Universidad Rey Juan Carlos with the collaboration of CSIC, under the Cajal Blue Brain Project.
Version: 2.10.0
Status: finished
cloc statistics
| Language | files | blank | comment | code |
|---|---|---|---|---|
| C++ | 783 | 27558 | 23925 | 101885 |
| C/C++ Header | 513 | 12624 | 29154 | 25153 |
| CMake | 66 | 441 | 213 | 2814 |
| Total | 1362 | 40623 | 53292 | 129852 |