Prior parameters supplied as data

[gowerc]

Closes #106

Is feature complete but still need to do docs + tests so currently WIP

[gowerc]

@danielinteractive - Pending on cicd failures this is now ready for review. Note as always most of the files changed are just docs due to the use of @family

[github-actions]

Code Coverage Summary

Filename                       Stmts    Miss  Cover    Missing
---------------------------  -------  ------  -------  ----------------------
R/DataJoint.R                     56       0  100.00%
R/DataLongitudinal.R             100       1  99.00%   245
R/DataSubject.R                   52       1  98.08%   123
R/DataSurvival.R                  55       1  98.18%   145
R/defaults.R                      13       7  46.15%   27, 45-84, 111
R/generics.R                      14       1  92.86%   69
R/JointModel.R                    62       5  91.94%   113-125
R/JointModelSamples.R             23       0  100.00%
R/Link.R                           6       0  100.00%
R/LinkGSF.R                       63      12  80.95%   109-120
R/LinkNone.R                       3       1  66.67%   36
R/LinkRandomSlope.R               10       0  100.00%
R/LongitudinalGSF.R               23       0  100.00%
R/LongitudinalModel.R             10       0  100.00%
R/LongitudinalQuantities.R        71       8  88.73%   89-96
R/LongitudinalRandomSlope.R       21       0  100.00%
R/Parameter.R                     10       0  100.00%
R/ParameterList.R                 28       0  100.00%
R/Prior.R                        100      20  80.00%   55-61, 198-210
R/Quantities.R                    89       0  100.00%
R/simulations_gsf.R               43       0  100.00%
R/simulations_os.R                11       5  54.55%   35-39
R/simulations_rs.R                21       0  100.00%
R/simulations.R                   99       1  98.99%   122
R/StanModel.R                      6       0  100.00%
R/StanModule.R                   145       5  96.55%   197-198, 214, 251, 262
R/SurvivalExponential.R            9       0  100.00%
R/SurvivalLoglogistic.R           10      10  0.00%    31-40
R/SurvivalModel.R                 12       0  100.00%
R/SurvivalQuantities.R           103       6  94.17%   161-166
R/SurvivalWeibullPH.R             10       0  100.00%
R/utilities.R                    145       1  99.31%   13
R/zzz.R                           11      11  0.00%    4-29
TOTAL                           1434      96  93.31%

Diff against main

Filename                       Stmts    Miss  Cover
---------------------------  -------  ------  --------
R/JointModel.R                    +3       0  +0.41%
R/JointModelSamples.R             +3       0  +100.00%
R/LongitudinalRandomSlope.R       +4      -1  +5.88%
R/Parameter.R                     -1       0  +100.00%
R/ParameterList.R                 +1       0  +100.00%
R/Prior.R                        +37      +5  +3.81%
TOTAL                            +47      +4  -0.06%

Results for commit: e412841

Minimum allowed coverage is 80%

♻️ This comment has been updated with latest results

[github-actions]

Unit Tests Summary

    1 files    27 suites   6m 40s ⏱️
  63 tests   61 ✔️ 2 💤 0 ❌
279 runs  277 ✔️ 2 💤 0 ❌

Results for commit e412841.

♻️ This comment has been updated with latest results.