Dockerfile

# Your version: 0.6.0 Latest version: 0.7.0
# Generated by Neurodocker version 0.6.0
# Timestamp: 2020-04-30 13:55:19 UTC
# 
# Thank you for using Neurodocker. If you discover any issues
# or ways to improve this software, please submit an issue or
# pull request on our GitHub repository:
# 
#     https://github.com/kaczmarj/neurodocker

FROM hbclab/accel-bids:unstable

USER root

ARG DEBIAN_FRONTEND="noninteractive"

ENV LANG="en_US.UTF-8" \
    LC_ALL="en_US.UTF-8" \
    ND_ENTRYPOINT="/neurodocker/startup.sh"
RUN export ND_ENTRYPOINT="/neurodocker/startup.sh" \
    && apt-get update -qq \
    && apt-get install -y -q --no-install-recommends \
           apt-utils \
           bzip2 \
           ca-certificates \
           curl \
           locales \
           unzip \
    && apt-get clean \
    && rm -rf /var/lib/apt/lists/* \
    && sed -i -e 's/# en_US.UTF-8 UTF-8/en_US.UTF-8 UTF-8/' /etc/locale.gen \
    && dpkg-reconfigure --frontend=noninteractive locales \
    && update-locale LANG="en_US.UTF-8" \
    && chmod 777 /opt && chmod a+s /opt \
    && mkdir -p /neurodocker \
    && if [ ! -f "$ND_ENTRYPOINT" ]; then \
         echo '#!/usr/bin/env bash' >> "$ND_ENTRYPOINT" \
    &&   echo 'set -e' >> "$ND_ENTRYPOINT" \
    &&   echo 'export USER="${USER:=`whoami`}"' >> "$ND_ENTRYPOINT" \
    &&   echo 'if [ -n "$1" ]; then "$@"; else /usr/bin/env bash; fi' >> "$ND_ENTRYPOINT"; \
    fi \
    && chmod -R 777 /neurodocker && chmod a+s /neurodocker

ENTRYPOINT ["/neurodocker/startup.sh"]

RUN test "$(getent passwd coder)" || useradd --no-user-group --create-home --shell /bin/bash coder
USER coder

WORKDIR /home/coder

ENV SHELL="/bin/bash"

RUN curl -o /tmp/code-server.tar.gz -SL https://github.com/cdr/code-server/releases/download/3.0.2/code-server-3.0.2-linux-x86_64.tar.gz

RUN mkdir -p /opt/codeserver && tar -xvf /tmp/code-server.tar.gz -C /opt/codeserver --strip-components=1

RUN /opt/codeserver/code-server --install-extension eamodio.gitlens && /opt/codeserver/code-server --install-extension ms-python.python

EXPOSE 8080

ENTRYPOINT ["/opt/codeserver/code-server", "--auth", "none", "--host", "0.0.0.0", "/home/coder/projects"]

RUN echo '{ \
    \n  "pkg_manager": "apt", \
    \n  "instructions": [ \
    \n    [ \
    \n      "base", \
    \n      "hbclab/accel-bids:unstable" \
    \n    ], \
    \n    [ \
    \n      "user", \
    \n      "coder" \
    \n    ], \
    \n    [ \
    \n      "workdir", \
    \n      "/home/coder" \
    \n    ], \
    \n    [ \
    \n      "env", \
    \n      { \
    \n        "SHELL": "/bin/bash" \
    \n      } \
    \n    ], \
    \n    [ \
    \n      "run", \
    \n      "curl -o /tmp/code-server.tar.gz -SL https://github.com/cdr/code-server/releases/download/3.0.2/code-server-3.0.2-linux-x86_64.tar.gz" \
    \n    ], \
    \n    [ \
    \n      "run", \
    \n      "mkdir -p /opt/codeserver && tar -xvf /tmp/code-server.tar.gz -C /opt/codeserver --strip-components=1" \
    \n    ], \
    \n    [ \
    \n      "run", \
    \n      "/opt/codeserver/code-server --install-extension eamodio.gitlens && /opt/codeserver/code-server --install-extension ms-python.python" \
    \n    ], \
    \n    [ \
    \n      "expose", \
    \n      [ \
    \n        "8080" \
    \n      ] \
    \n    ], \
    \n    [ \
    \n      "entrypoint", \
    \n      "/opt/codeserver/code-server --auth none --host 0.0.0.0 /home/coder/projects" \
    \n    ] \
    \n  ] \
    \n}' > /neurodocker/neurodocker_specs.json