From d1c50961e5ffc4abf8266a40560136ccfe874356 Mon Sep 17 00:00:00 2001
From: zhenxian <920596906@qq.com>
Date: Fri, 26 Jan 2024 15:24:10 +0800
Subject: [PATCH] Update README.md

---
 README.md | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/README.md b/README.md
index f971b64..db8f240 100644
--- a/README.md
+++ b/README.md
@@ -91,7 +91,7 @@ For somatic variant calling using tumor only sample, please try [ClairS-TO](http
 ------
 
 ## Latest Updates
-*v0.1.7 (Jan 25, 2024)* : 1. Added ONT Dorado 5khz HAC (`-p ont_r10_dorado_hac_5khz`) and Dorado 4khz HAC (`-p ont_r10_dorado_hac_4khz`) model, renamed all ONT Dorado SUP model, check [here](https://github.com/HKU-BAL/ClairS-TO/blob/main/README.md#pre-trained-models) for more details. 2. Enabled somatic variant calling in sex chromosomes. 3. Added `FAU`, `FCU`, `FGU`, `FTU`, `RAU`, `RCU`, `RGU`, and `RTU` tags.
+*v0.1.7 (Jan 25, 2024)* : 1. Added ONT Dorado 5khz HAC (`-p ont_r10_dorado_hac_5khz`) and Dorado 4khz HAC (`-p ont_r10_dorado_hac_4khz`) model, renamed all ONT Dorado SUP model, check [here](https://github.com/HKU-BAL/ClairS/blob/main/README.md#pre-trained-models) for more details. 2. Enabled somatic variant calling in sex chromosomes. 3. Added `FAU`, `FCU`, `FGU`, `FTU`, `RAU`, `RCU`, `RGU`, and `RTU` tags.
 
 *v0.1.6 (Sep 18)* : 1. Fixed an output bug that caused no VCF output if no Indel candidate was found (contributor @[Khi Pin](https://github.com/proteinosome)). 2. Fixed showing incorrect reference allele depth at a deletion region. 3. Added PacBio HiFi [quick demo](docs/pacbio_hifi_quick_demo.md).
 
@@ -140,8 +140,8 @@ ClairS trained both pileup and full-alignment models using GIAB samples, and car
 | ONT | r1041_e82_400bps_sup_v410 | R10.4.1, 4khz | Dorado SUP | `ont_r10_dorado_sup_4khz` | GRCh38_no_alt | Minimap2 |
 | ONT | r1041_e82_400bps_hac_v420 | R10.4.1, 5khz | Dorado HAC | `ont_r10_dorado_hac_5khz` | GRCh38_no_alt | Minimap2 |
 | ONT | r1041_e82_400bps_hac_v410 | R10.4.1, 4khz | Dorado HAC | `ont_r10_dorado_hac_4khz` | GRCh38_no_alt | Minimap2 |
-|     ONT     | r104_e81_sup_g5015 |        R10.4/R10.4.1         |        Guppy5 SUP        | `ont_r10_guppy_sup` | GRCh38_no_alt | Minimap2 |
-|    ONT <sup>1</sup>    |  r941_prom_sup_g5014   |            R9.4.1            |            Guppy5 SUP            |         `ont_r9_guppy`         | GRCh38_no_alt | Minimap2 |
+|     ONT     | r104_e81_sup_g5015 |        R10.4/R10.4.1, 4khz         |        Guppy5 SUP        | `ont_r10_guppy` | GRCh38_no_alt | Minimap2 |
+|    ONT <sup>1</sup>    |  r941_prom_sup_g5014   |            R9.4.1, 4khz            |            Guppy5 SUP            |         `ont_r9_guppy`         | GRCh38_no_alt | Minimap2 |
 |  Illumina   |          ilmn          |        NovaSeq/HiseqX        |        -        |          `ilmn`          |    GRCh38     | BWA-MEM  |
 | PacBio HiFi <sup>2</sup> |          hifi_sequel2          | Sequel II with Chemistry 2.0 | - |          `hifi_sequel2`          | GRCh38_no_alt | Minimap2 |
 | PacBio HIFI | hifi_revio | Revio with SMRTbell prep kit 3.0 | - | `hifi_revio` | GRCh38_no_alt | Minimap2 |