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Metrics definition for RNA-Seq

1- First metric

Definition

Explanation of the metric, with external links if available.

Interpretation

Acceptable thresholds when applicable.

Instructions

How to run commands to obtain the metric

  • Prerequisites
  • Command explanation
  • Command example

2- Second metric

Definition

Explanation of the metric, with external links if available.

Interpretation

Acceptable thresholds when applicable.

Instructions

How to run commands to obtain the metric

  • Prerequisites
  • Command explanation
  • Command example

Computing the metrics

For scripts and resources helpful for computing the metrics see: scripts and GRCh38 resources