What’s in a name? : Sense and Reference in biodiversity information
doi:10.7910/DVN/BAMCSI
Harvard Dataverse
2017-01-12
1
Philipson, Joakim, 2017, "What’s in a name? : Sense and Reference in
biodiversity information", doi:10.7910/DVN/BAMCSI, Harvard Dataverse, V1
What’s in a name? : Sense and Reference in biodiversity information
doi:10.7910/DVN/BAMCSI
Philipson, Joakim
Harvard Dataverse
2017-01-12
Medicine, Health and Life Sciences
Computer and Information Science
Metadata
PID
system
Biodiversity
Taxonomy
"That which we call a rose by any other name would smell as sweet.”
Shakespeare has Juliet tell her Romeo that a name is just a convention without
meaning, what counts is the reference, the 'thing itself', to which the property of
smelling sweet pertains alone. Frege in his classical paper “Über Sinn und
Bedeutung” was not so sure, he assumed names can be inherently meaningful, even
without a known reference. And Wittgenstein later in Philosophical Investigations
(PI) seems to deny the sheer arbitrariness of names and reject looking for meaning
out of context, by pointing to our inability to just utter some random sounds and by
that really implying e.g. the door. The word cannot simply be separated from its
meaning, in the same way as the money from the cow that could be bought for them (PI
120). Scientific names of biota, in particular, are often descriptive of properties
pertaining to the organism or species itself. On the other hand, in semantic web
technology and Linked Open Data (LOD) there is an overall effort to replace names by
their references, in the form of web links or Uniform Resource Identifiers (URIs).
“Things, not strings” is the motto. But, even in view of the many "challenges with
using names to link digital biodiversity information" that were extensively
described in a recent paper, would it at all be possible or even desirable to
replace scientific names of biota with URIs? Or would it be sufficient to just
identify equivalence relationships between different variants of names of the same
biota, having the same reference, and then just link them to the same “thing”, by
means of a property sameAs(URI)? The Global Names Architecture (GNA) has a resolver
of scientific names that is already doing that kind of work, linking names of biota
such as Pinus thunbergii to global identifiers and URIs from other data sources,
such as Encyclopedia of Life (EOL) and uBio Namebank. But there may be other
challenges with going from a “natural language”, even from a not entirely coherent
system of scientific names, to a semantic web ontology, a solution to some of which
have been proposed recently by means of so called 'lexical bridges'.
Philipson, Joakim
Philipson, Joakim
2017-01-12
CC0 Waiver
1062_Philipson.pptx
Presentation at TDWG 2016 Annual Conference, 5-9 Dec., Santa Clara de San Carlos, Costa
Rica. (pptx-slides with notes)
application/vnd.openxmlformats-officedocument.presentationml.presentation