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David Johnson edited this page Feb 26, 2016
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The ISA API is published as the isatools
Python package. The package aims to provide you, the developer, with a set of tools to help you easily and quickly build your own ISA objects, validate, and convert between serializations of ISA-formatted datasets and other formats/schemas (e.g. SRA schemas). The goal of this package is to provide a flexible way to build and use ISA content, as well as provide utility functions for file conversions and validation.
- Installation
- ISA model
- Creating objects
- Converting between ISA formats
- Importing and exporting SRA formatted datasets
- Downloading files stored in Github
- Validating ISAtab and ISA JSON
- Known Issues