ENH: Bump ITK and replace http with https using script

InsightSoftwareConsortium · Jun 1, 2022 · 2c6aa18 · 2c6aa18
1 parent 18d15de
commit 2c6aa18
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diff --git a/.clang-format b/.clang-format
@@ -4,7 +4,7 @@
 ## See: https://clang.llvm.org/docs/ClangFormatStyleOptions.html for details of each option
 ##
 ## The clang-format binaries can be downloaded as part of the clang binary distributions
-## from http://releases.llvm.org/download.html
+## from https://releases.llvm.org/download.html
 ##
 ## Use the script Utilities/Maintenance/clang-format.bash to faciliate
 ## maintaining a consistent code style.

diff --git a/.github/workflows/build-test-package.yml b/.github/workflows/build-test-package.yml
@@ -13,17 +13,17 @@ jobs:
           - os: ubuntu-18.04
             c-compiler: "gcc"
             cxx-compiler: "g++"
-            itk-git-tag: "a89145bccda6a36f42cfdd45d3a6b27234ff54fe"
+            itk-git-tag: "d6acfd26bfcdec606d605beb1301bddfb17c05a6"
             cmake-build-type: "MinSizeRel"
           - os: windows-2019
             c-compiler: "cl.exe"
             cxx-compiler: "cl.exe"
-            itk-git-tag: "a89145bccda6a36f42cfdd45d3a6b27234ff54fe"
+            itk-git-tag: "d6acfd26bfcdec606d605beb1301bddfb17c05a6"
             cmake-build-type: "Release"
           - os: macos-10.15
             c-compiler: "clang"
             cxx-compiler: "clang++"
-            itk-git-tag: "a89145bccda6a36f42cfdd45d3a6b27234ff54fe"
+            itk-git-tag: "d6acfd26bfcdec606d605beb1301bddfb17c05a6"
             cmake-build-type: "MinSizeRel"
 
     steps:
@@ -134,9 +134,9 @@ jobs:
     strategy:
       max-parallel: 2
       matrix:
-        python-version: [36, 37, 38, 39]
+        python-version: [37, 38, 39, 310]
         include:
-          - itk-python-git-tag: "v5.2rc01"
+          - itk-python-git-tag: "v5.3rc04"
 
     steps:
     - uses: actions/checkout@v2
@@ -172,7 +172,7 @@ jobs:
       max-parallel: 2
       matrix:
         include:
-          - itk-python-git-tag: "v5.2rc01"
+          - itk-python-git-tag: "v5.3rc04"
 
     steps:
     - uses: actions/checkout@v2
@@ -206,9 +206,9 @@ jobs:
     strategy:
       max-parallel: 2
       matrix:
-        python-version-minor: [6, 7, 8, 9]
+        python-version-minor: [7, 8, 9, 10]
         include:
-          - itk-python-git-tag: "v5.2rc01"
+          - itk-python-git-tag: "v5.3rc04"
 
     steps:
     - name: Get specific version of CMake, Ninja
@@ -241,7 +241,7 @@ jobs:
       run: |
         cd ../../im
         call "C:\Program Files (x86)\Microsoft Visual Studio\2019\Enterprise\VC\Auxiliary\Build\vcvars64.bat"
-        set PATH="C:\P\grep;%PATH%"
+        set PATH=C:\P\grep;%PATH%
         set CC=cl.exe
         set CXX=cl.exe
         C:\Python3${{ matrix.python-version-minor }}-x64\python.exe C:\P\IPP\scripts\windows_build_module_wheels.py --py-envs "3${{ matrix.python-version-minor }}-x64" --no-cleanup

diff --git a/LICENSE b/LICENSE
@@ -1,7 +1,7 @@
 
                                  Apache License
                            Version 2.0, January 2004
-                        http://www.apache.org/licenses/
+                        https://www.apache.org/licenses/
 
    TERMS AND CONDITIONS FOR USE, REPRODUCTION, AND DISTRIBUTION
 
@@ -193,7 +193,7 @@
    you may not use this file except in compliance with the License.
    You may obtain a copy of the License at
 
-       http://www.apache.org/licenses/LICENSE-2.0
+       https://www.apache.org/licenses/LICENSE-2.0
 
    Unless required by applicable law or agreed to in writing, software
    distributed under the License is distributed on an "AS IS" BASIS,

diff --git a/README.rst b/README.rst
@@ -20,13 +20,13 @@ ITK classes for mathematical morphology using parabolic structuring functions.
 Parabolic functions can be used to build fast distance transforms, and binary
 morphology using spheres.
 
-For more information, see the `Insight Journal article <http://hdl.handle.net/1926/1370>`_::
+For more information, see the `Insight Journal article <https://hdl.handle.net/1926/1370>`_::
 
   Beare R.
   Morphology with parabolic structuring elements
   The Insight Journal. January-June. 2008.
-  http://hdl.handle.net/1926/1370
-  http://www.insight-journal.org/browse/publication/228
+  https://hdl.handle.net/1926/1370
+  https://www.insight-journal.org/browse/publication/228
 
 Installation
 ------------

diff --git a/doc/Article.tex b/doc/Article.tex
@@ -4,7 +4,7 @@
 % of the standard documentation for Insight.  It may be found online
 % at:
 %
-%     http://www.itk.org/
+%     https://www.itk.org/
 
 \documentclass{InsightArticle}
 

diff --git a/doc/InsightArticle.cls b/doc/InsightArticle.cls
@@ -71,11 +71,11 @@
 
 % Define command to make reference to on-line Doxygen documentation
 \newcommand{\doxygen}[1]{
-\href{http://www.itk.org/Doxygen/html/classitk_1_1#1.html}{\code{itk::#1}}}  
+\href{https://www.itk.org/Doxygen/html/classitk_1_1#1.html}{\code{itk::#1}}}  
 
 % Define command to make reference to on-line Doxygen documentation
 \newcommand{\subdoxygen}[2]{
-\href{http://www.itk.org/Doxygen/html/classitk_1_1#1_1_1#2.html}{\code{itk::#1::#2}}}  
+\href{https://www.itk.org/Doxygen/html/classitk_1_1#1_1_1#2.html}{\code{itk::#1::#2}}}  
 
 % Define command for the standard comment introducing classes with similar functionalities
 \newcommand{\relatedClasses}{

diff --git a/doc/InsightJournal.bib b/doc/InsightJournal.bib
@@ -35,7 +35,7 @@ @InProceedings{Whitaker1994c
 
 @Manual{POVRay,
   Title          = "Persistence of Vision, Ray-Tracer",
-  Address        = "http://www.povray.org",
+  Address        = "https://www.povray.org",
 }
 
 @Book{Romeny1994,
@@ -55,7 +55,7 @@ @Book{ToErrIsHuman2001
 @TechReport{Aisemberg,
   Author         = "G.O. Aisemberg",
   Title          = "Vertebrate embryology",
-  Address        = "http://lcw.lehman.edu/lehman/depts/biology/aisemberg/Bio268.html",
+  Address        = "https://lcw.lehman.edu/lehman/depts/biology/aisemberg/Bio268.html",
   Institution    = "Department of Biological Sciences. Lehman College,
                    City University of New York",
   year           = 1998,
@@ -758,7 +758,7 @@ @TechReport{Culver1999
   Title          = "Intrinsic scale for boundary representation of
                    two-dimensional objects",
   Institution    = "MIDAG, University of North Carolina at Chapel Hill",
-  annote         = "http://www.cs.unc.edu/~culver",
+  annote         = "https://www.cs.unc.edu/~culver",
   year           = 1999,
 }
 
@@ -832,7 +832,7 @@ @TechReport{Deriche1993
 @Book{Darwin1999,
   Author         = "C. Darwin",
   Title          = "On the Origin of Species",
-  Publisher      = "http://www.gutenberg.org",
+  Publisher      = "https://www.gutenberg.org",
   Edition        = "sixth",
   year           = 1999,
 }
@@ -1796,7 +1796,7 @@ @Manual{ITKSoftwareGuide
   Title          = {The {ITK} {S}oftware {G}uide},
   Author         = {Ibanez, L. and Schroeder, W.},
   Organization   = "Kitware, Inc. ISBN 1-930934-10-6",
-  Address        = {http://www.itk.org/ItkSoftwareGuide.pdf},
+  Address        = {https://www.itk.org/ItkSoftwareGuide.pdf},
   year           = 2003,
 }
 
@@ -3454,7 +3454,7 @@ @Manual{OpenGLSpecification
   Title          = "The OpenGL Graphics System: A Specification (Version
                    1.2)",
   Author         = "M. Segal and K. Akeley",
-  Address        = "http://www.opengl.org",
+  Address        = "https://www.opengl.org",
   month          = "march",
   year           = 1998,
 }
@@ -3872,7 +3872,7 @@ @TechReport{Udupa1998
   Author         = "J. K. Udupa and S. Samarasekera",
   Title          = "Extraction of fuzzy object information in multidimensional images for quantifying MS lesions of the brain",
   year           = 1998,
-  Institution    = "United States Patent Office http://www.uspto.gov",
+  Institution    = "United States Patent Office https://www.uspto.gov",
   Number         = "5,812,691"
 }
 
@@ -4767,7 +4767,7 @@ @Manual{CreatisINSA-Lyon
   Title          = "The GDCM Library",
   Institution    = "CREATIS (France)",
   Organization   = "CNRS, INSERM, INSA Lyon, UCB Lyon",
-  Address        = "http://www-creatis.insa-lyon.fr/Public/Gdcm/"
+  Address        = "https://www.creatis.insa-lyon.fr/Public/Gdcm/"
 }
 
 @InProceedings{Chung2002,

diff --git a/doc/local.bib b/doc/local.bib
@@ -19,6 +19,6 @@ @article{Schavemaker2000
   number    = {6},
   year      = {2000},
   pages     = {997-1012},
-  ee        = {http://dx.doi.org/10.1016/S0031-3203(99)00160-0},
-  bibsource = {DBLP, http://dblp.uni-trier.de}
+  ee        = {https://dx.doi.org/10.1016/S0031-3203(99)00160-0},
+  bibsource = {DBLP, https://dblp.uni-trier.de}
 }
diff --git a/include/itkBinaryCloseParaImageFilter.h b/include/itkBinaryCloseParaImageFilter.h
@@ -6,7 +6,7 @@
  *  you may not use this file except in compliance with the License.
  *  You may obtain a copy of the License at
  *
- *         http://www.apache.org/licenses/LICENSE-2.0.txt
+ *         https://www.apache.org/licenses/LICENSE-2.0.txt
  *
  *  Unless required by applicable law or agreed to in writing, software
  *  distributed under the License is distributed on an "AS IS" BASIS,
@@ -55,7 +55,7 @@ namespace itk
  * Core methods described in the InsightJournal article:
  * "Morphology with parabolic structuring elements"
  *
- * http://hdl.handle.net/1926/1370
+ * https://hdl.handle.net/1926/1370
  *
  * \sa itkParabolicErodeImageFilter
  *

diff --git a/include/itkBinaryCloseParaImageFilter.hxx b/include/itkBinaryCloseParaImageFilter.hxx
@@ -6,7 +6,7 @@
  *  you may not use this file except in compliance with the License.
  *  You may obtain a copy of the License at
  *
- *         http://www.apache.org/licenses/LICENSE-2.0.txt
+ *         https://www.apache.org/licenses/LICENSE-2.0.txt
  *
  *  Unless required by applicable law or agreed to in writing, software
  *  distributed under the License is distributed on an "AS IS" BASIS,

diff --git a/include/itkBinaryDilateParaImageFilter.h b/include/itkBinaryDilateParaImageFilter.h
@@ -6,7 +6,7 @@
  *  you may not use this file except in compliance with the License.
  *  You may obtain a copy of the License at
  *
- *         http://www.apache.org/licenses/LICENSE-2.0.txt
+ *         https://www.apache.org/licenses/LICENSE-2.0.txt
  *
  *  Unless required by applicable law or agreed to in writing, software
  *  distributed under the License is distributed on an "AS IS" BASIS,
@@ -53,7 +53,7 @@ namespace itk
  * Core methods described in the InsightJournal article:
  * "Morphology with parabolic structuring elements"
  *
- * http://hdl.handle.net/1926/1370
+ * https://hdl.handle.net/1926/1370
  *
  * \sa itkParabolicDilateImageFilter
  *

diff --git a/include/itkBinaryDilateParaImageFilter.hxx b/include/itkBinaryDilateParaImageFilter.hxx
@@ -6,7 +6,7 @@
  *  you may not use this file except in compliance with the License.
  *  You may obtain a copy of the License at
  *
- *         http://www.apache.org/licenses/LICENSE-2.0.txt
+ *         https://www.apache.org/licenses/LICENSE-2.0.txt
  *
  *  Unless required by applicable law or agreed to in writing, software
  *  distributed under the License is distributed on an "AS IS" BASIS,

diff --git a/include/itkBinaryErodeParaImageFilter.h b/include/itkBinaryErodeParaImageFilter.h
@@ -6,7 +6,7 @@
  *  you may not use this file except in compliance with the License.
  *  You may obtain a copy of the License at
  *
- *         http://www.apache.org/licenses/LICENSE-2.0.txt
+ *         https://www.apache.org/licenses/LICENSE-2.0.txt
  *
  *  Unless required by applicable law or agreed to in writing, software
  *  distributed under the License is distributed on an "AS IS" BASIS,
@@ -53,7 +53,7 @@ namespace itk
  * Core methods described in the InsightJournal article:
  * "Morphology with parabolic structuring elements"
  *
- * http://hdl.handle.net/1926/1370
+ * https://hdl.handle.net/1926/1370
  *
  * \sa itkParabolicErodeImageFilter
  *

diff --git a/include/itkBinaryErodeParaImageFilter.hxx b/include/itkBinaryErodeParaImageFilter.hxx
@@ -6,7 +6,7 @@
  *  you may not use this file except in compliance with the License.
  *  You may obtain a copy of the License at
  *
- *         http://www.apache.org/licenses/LICENSE-2.0.txt
+ *         https://www.apache.org/licenses/LICENSE-2.0.txt
  *
  *  Unless required by applicable law or agreed to in writing, software
  *  distributed under the License is distributed on an "AS IS" BASIS,

diff --git a/include/itkBinaryOpenParaImageFilter.h b/include/itkBinaryOpenParaImageFilter.h
@@ -6,7 +6,7 @@
  *  you may not use this file except in compliance with the License.
  *  You may obtain a copy of the License at
  *
- *         http://www.apache.org/licenses/LICENSE-2.0.txt
+ *         https://www.apache.org/licenses/LICENSE-2.0.txt
  *
  *  Unless required by applicable law or agreed to in writing, software
  *  distributed under the License is distributed on an "AS IS" BASIS,
@@ -55,7 +55,7 @@ namespace itk
  * Core methods described in the InsightJournal article:
  * "Morphology with parabolic structuring elements"
  *
- * http://hdl.handle.net/1926/1370
+ * https://hdl.handle.net/1926/1370
  * \sa itkParabolicErodeImageFilter
  *
  *

diff --git a/include/itkBinaryOpenParaImageFilter.hxx b/include/itkBinaryOpenParaImageFilter.hxx
@@ -6,7 +6,7 @@
  *  you may not use this file except in compliance with the License.
  *  You may obtain a copy of the License at
  *
- *         http://www.apache.org/licenses/LICENSE-2.0.txt
+ *         https://www.apache.org/licenses/LICENSE-2.0.txt
  *
  *  Unless required by applicable law or agreed to in writing, software
  *  distributed under the License is distributed on an "AS IS" BASIS,

diff --git a/include/itkGreaterEqualValImageFilter.h b/include/itkGreaterEqualValImageFilter.h
@@ -6,7 +6,7 @@
  *  you may not use this file except in compliance with the License.
  *  You may obtain a copy of the License at
  *
- *         http://www.apache.org/licenses/LICENSE-2.0.txt
+ *         https://www.apache.org/licenses/LICENSE-2.0.txt
  *
  *  Unless required by applicable law or agreed to in writing, software
  *  distributed under the License is distributed on an "AS IS" BASIS,

diff --git a/include/itkMorphSDTHelperImageFilter.h b/include/itkMorphSDTHelperImageFilter.h
@@ -6,7 +6,7 @@
  *  you may not use this file except in compliance with the License.
  *  You may obtain a copy of the License at
  *
- *         http://www.apache.org/licenses/LICENSE-2.0.txt
+ *         https://www.apache.org/licenses/LICENSE-2.0.txt
  *
  *  Unless required by applicable law or agreed to in writing, software
  *  distributed under the License is distributed on an "AS IS" BASIS,

diff --git a/include/itkMorphologicalDistanceTransformImageFilter.h b/include/itkMorphologicalDistanceTransformImageFilter.h
@@ -6,7 +6,7 @@
  *  you may not use this file except in compliance with the License.
  *  You may obtain a copy of the License at
  *
- *         http://www.apache.org/licenses/LICENSE-2.0.txt
+ *         https://www.apache.org/licenses/LICENSE-2.0.txt
  *
  *  Unless required by applicable law or agreed to in writing, software
  *  distributed under the License is distributed on an "AS IS" BASIS,
@@ -46,7 +46,7 @@ namespace itk
  * Core methods described in the InsightJournal article:
  * "Morphology with parabolic structuring elements"
  *
- * http://hdl.handle.net/1926/1370
+ * https://hdl.handle.net/1926/1370
  *
  * \ingroup ParabolicMorphology
  *

diff --git a/include/itkMorphologicalDistanceTransformImageFilter.hxx b/include/itkMorphologicalDistanceTransformImageFilter.hxx
@@ -6,7 +6,7 @@
  *  you may not use this file except in compliance with the License.
  *  You may obtain a copy of the License at
  *
- *         http://www.apache.org/licenses/LICENSE-2.0.txt
+ *         https://www.apache.org/licenses/LICENSE-2.0.txt
  *
  *  Unless required by applicable law or agreed to in writing, software
  *  distributed under the License is distributed on an "AS IS" BASIS,

diff --git a/include/itkMorphologicalSharpeningImageFilter.h b/include/itkMorphologicalSharpeningImageFilter.h
@@ -6,7 +6,7 @@
  *  you may not use this file except in compliance with the License.
  *  You may obtain a copy of the License at
  *
- *         http://www.apache.org/licenses/LICENSE-2.0.txt
+ *         https://www.apache.org/licenses/LICENSE-2.0.txt
  *
  *  Unless required by applicable law or agreed to in writing, software
  *  distributed under the License is distributed on an "AS IS" BASIS,
@@ -46,14 +46,14 @@ namespace itk
  * number    = {6},
  * year      = {2000},
  * pages     = {997-1012},
- * ee        = {http://dx.doi.org/10.1016/S0031-3203(99)00160-0},
- * bibsource = {DBLP, http://dblp.uni-trier.de}
+ * ee        = {https://dx.doi.org/10.1016/S0031-3203(99)00160-0},
+ * bibsource = {DBLP, https://dblp.uni-trier.de}
 }
 
  * Core methods described in the InsightJournal article:
  * "Morphology with parabolic structuring elements"
  *
- * http://hdl.handle.net/1926/1370
+ * https://hdl.handle.net/1926/1370
  *
  *
  * \ingroup ParabolicMorphology