-
Notifications
You must be signed in to change notification settings - Fork 0
/
trace.txt
37 lines (37 loc) · 7.57 KB
/
trace.txt
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
process task_id hash name attempt status exit realtime %cpu vmem rss submit start complete duration realtime rchar wchar
ParseInput 1 18/d90fa8 ParseInput (Parse input test) 1 CACHED 0 956ms 100.6% 13.1 MB 9.9 MB 2024-11-06 01:53:47.392 2024-11-06 01:53:47.439 2024-11-06 01:53:48.613 1.2s 956ms 3.6 MB 362.8 KB
LoadPlatform 3 aa/73446b LoadPlatform (Load sequencing platform CBIOP_WXS_PRAD_BROAD) 1 CACHED 0 18ms 81.5% 0 0 2024-11-06 01:53:48.657 2024-11-06 01:53:48.716 2024-11-06 01:53:48.972 315ms 18ms 539.8 KB 343.3 KB
LoadGenome 2 71/a60cf5 LoadGenome (Load reference genome CBIOP_WXS_PRAD_BROAD) 1 CACHED 0 16ms 79.5% 0 0 2024-11-06 01:53:48.665 2024-11-06 01:53:48.717 2024-11-06 01:53:49.020 355ms 16ms 539.8 KB 343.3 KB
LoadCancer 4 c4/d537a7 LoadCancer (Load cancer type CBIOP_WXS_PRAD_BROAD) 1 CACHED 0 20ms 98.9% 0 0 2024-11-06 01:53:48.640 2024-11-06 01:53:48.714 2024-11-06 01:53:48.921 281ms 20ms 539.8 KB 343.3 KB
ProcessVariants 5 9a/971d79 ProcessVariants (Process variants CBIOP_WXS_PRAD_BROAD) 1 CACHED 0 1m 43s 95.8% 14.8 GB 11.4 GB 2024-11-06 01:53:49.031 2024-11-06 01:53:49.062 2024-11-06 01:55:32.327 1m 43s 1m 43s 127.4 MB 66.2 KB
FormatCLUSTL 6 47/c5dca5 FormatCLUSTL (Prepare for CLUSTL CBIOP_WXS_PRAD_BROAD) 1 CACHED 0 10.9s 98.6% 383.1 MB 328.7 MB 2024-11-06 01:55:32.375 2024-11-06 01:55:32.431 2024-11-06 01:55:43.714 11.3s 10.9s 5.8 MB 44.4 KB
FormatDNDSCV 9 73/de532b FormatDNDSCV (Prepare for DNDSCV CBIOP_WXS_PRAD_BROAD) 1 CACHED 0 11s 98.5% 383.1 MB 328.7 MB 2024-11-06 01:55:32.362 2024-11-06 01:55:32.426 2024-11-06 01:55:43.891 11.5s 11s 5.8 MB 44.3 KB
FormatSignature 7 b1/dfdf98 FormatSignature (Prepare for signatures CBIOP_WXS_PRAD_BROAD) 1 CACHED 0 11s 98.6% 383.1 MB 328.8 MB 2024-11-06 01:55:32.367 2024-11-06 01:55:32.428 2024-11-06 01:55:43.622 11.3s 11s 5.8 MB 44.4 KB
FormatFML 10 e1/a07fc4 FormatFML (Prepare for FML CBIOP_WXS_PRAD_BROAD) 1 CACHED 0 11s 98.4% 383.1 MB 328.8 MB 2024-11-06 01:55:32.370 2024-11-06 01:55:32.429 2024-11-06 01:55:43.712 11.3s 11s 5.8 MB 44.4 KB
FormatVEP 8 8a/5c2af4 FormatVEP (Prepare for VEP CBIOP_WXS_PRAD_BROAD) 1 CACHED 0 11s 98.6% 382.8 MB 328.3 MB 2024-11-06 01:55:32.380 2024-11-06 01:55:32.432 2024-11-06 01:55:43.931 11.6s 11s 6.6 MB 846.7 KB
dNdScv 11 f2/f00b54 dNdScv (dNdScv CBIOP_WXS_PRAD_BROAD) 1 CACHED 0 43.4s 98.9% 2.7 GB 2.6 GB 2024-11-06 01:55:43.899 2024-11-06 01:55:43.933 2024-11-06 01:56:27.523 43.6s 43.4s 54.2 MB 1.3 KB
VEP 13 60/769114 VEP (VEP CBIOP_WXS_PRAD_BROAD) 1 CACHED 0 1m 23s 97.3% 1.5 GB 1.5 GB 2024-11-06 01:55:43.946 2024-11-06 01:55:44.031 2024-11-06 01:57:07.544 1m 24s 1m 23s 1.9 GB 20.9 MB
CohortCounts 14 6f/f557e9 CohortCounts (Count variants CBIOP_WXS_PRAD_BROAD) 1 CACHED 0 9ms 137.5% 4.7 MB 3.1 MB 2024-11-06 01:53:48.981 2024-11-06 01:53:49.023 2024-11-06 01:53:49.058 77ms 9ms 1.6 MB 1.3 MB
ComputeProfile 12 7d/f21e06 ComputeProfile (ComputeProfile CBIOP_WXS_PRAD_BROAD) 1 CACHED 0 3.5s 143.0% 1.8 GB 201.5 MB 2024-11-06 01:55:43.658 2024-11-06 01:55:43.717 2024-11-06 01:55:47.391 3.7s 3.5s 10.3 MB 262.3 KB
ProcessVEPoutput 15 14/68cab8 ProcessVEPoutput (Process vep output CBIOP_WXS_PRAD_BROAD) 1 CACHED 0 596ms 91.7% 13.4 MB 9.9 MB 2024-11-06 01:57:07.559 2024-11-06 01:57:07.643 2024-11-06 01:57:08.422 863ms 596ms 2.2 MB 373.6 KB
MutationsSummary 24 a5/c44d35 MutationsSummary (Mutations) 1 CACHED 0 1.5s 161.2% 967.4 MB 75.2 MB 2024-11-06 01:57:08.442 2024-11-06 01:57:08.527 2024-11-06 01:57:10.534 2.1s 1.5s 9.7 MB 540.5 KB
CohortSummary 18 89/381942 CohortSummary (Count variants) 1 CACHED 0 3ms 146.7% 0 0 2024-11-06 01:53:49.067 2024-11-06 01:53:49.099 2024-11-06 01:53:49.101 34ms 3ms 153.7 KB 269 B
FormatMutPanning 23 e9/71a8f6 FormatMutPanning (Prepare for MutPanning CBIOP_WXS_PRAD_BROAD) 1 CACHED 0 26.4s 98.7% 382.8 MB 328.7 MB 2024-11-06 01:57:08.431 2024-11-06 01:57:08.523 2024-11-06 01:57:35.302 26.9s 26.4s 12.1 MB 380.6 KB
FormatHotMAPS 22 bd/a3a4b5 FormatHotMAPS (Prepare for HotMAPS CBIOP_WXS_PRAD_BROAD) 1 CACHED 0 13.5s 97.7% 382.8 MB 328.7 MB 2024-11-06 01:57:08.456 2024-11-06 01:57:08.530 2024-11-06 01:57:22.613 14.2s 13.5s 6.1 MB 445.7 KB
FilterNonSynonymous 19 ff/ac3e16 FilterNonSynonymous (Filter non synonymus CBIOP_WXS_PRAD_BROAD) 1 CACHED 0 390ms 79.1% 13.4 MB 9.9 MB 2024-11-06 01:57:08.434 2024-11-06 01:57:08.524 2024-11-06 01:57:09.303 869ms 390ms 1.5 MB 217.2 KB
FormatCBaSE 20 99/efe815 FormatCBaSE (Prepare for CBaSE CBIOP_WXS_PRAD_BROAD) 1 CACHED 0 13.7s 97.5% 3.2 GB 584.3 MB 2024-11-06 01:57:08.437 2024-11-06 01:57:08.526 2024-11-06 01:57:22.653 14.2s 13.7s 6.1 MB 118.5 KB
FormatdeconstructSigs 21 d3/1ac642 FormatdeconstructSigs (Prepare for deconstructSigs CBIOP_WXS_PRAD_BROAD) 1 CACHED 0 13.8s 97.5% 3.3 GB 588.7 MB 2024-11-06 01:57:08.449 2024-11-06 01:57:08.529 2024-11-06 01:57:22.832 14.4s 13.8s 6.1 MB 87.1 KB
OncodriveCLUSTL 17 d4/b7d268 OncodriveCLUSTL (OncodriveCLUSTL CBIOP_WXS_PRAD_BROAD) 1 CACHED 0 4m 20s 236.3% 24.5 GB 3.9 GB 2024-11-06 01:55:47.427 2024-11-06 01:55:47.494 2024-11-06 02:00:07.369 4m 20s 4m 20s 873.2 MB 835.4 MB
OncodriveFML 16 87/b0aba9 OncodriveFML (OncodriveFML CBIOP_WXS_PRAD_BROAD) 1 CACHED 0 2m 47s 321.4% 32.4 GB 2.8 GB 2024-11-06 01:55:47.421 2024-11-06 01:55:47.492 2024-11-06 01:58:34.879 2m 47s 2m 47s 6 GB 2 GB
FormatSMRegions 25 44/794784 FormatSMRegions (Prepare for SMRegions CBIOP_WXS_PRAD_BROAD) 1 CACHED 0 13.3s 98.5% 383.1 MB 328.7 MB 2024-11-06 01:57:09.316 2024-11-06 01:57:09.404 2024-11-06 01:57:22.983 13.7s 13.3s 6 MB 32.3 KB
ParseProfile 30 ab/ee3e83 ParseProfile (Parsing profile CBIOP_WXS_PRAD_BROAD) 1 CACHED 0 193ms 73.9% 13.1 MB 9.7 MB 2024-11-06 01:55:47.410 2024-11-06 01:55:47.491 2024-11-06 01:55:47.882 472ms 193ms 1.2 MB 3.5 KB
deconstructSigs 28 5b/692030 deconstructSigs (deconstructSigs CBIOP_WXS_PRAD_BROAD) 1 CACHED 0 1m 18s 97.9% 1.1 GB 875.9 MB 2024-11-06 01:57:22.844 2024-11-06 01:57:22.933 2024-11-06 01:58:41.023 1m 18s 1m 18s 93 MB 2.8 MB
CBaSE 29 9f/ee5547 CBaSE (CBaSE CBIOP_WXS_PRAD_BROAD) 1 CACHED 0 24m 59s 99.8% 2 GB 1.9 GB 2024-11-06 01:57:22.675 2024-11-06 01:57:22.753 2024-11-06 02:22:21.876 24m 59s 24m 59s 51 MB 2.4 MB
FilterMNVS 32 2a/534c1d FilterMNVS (MNVs filter) 1 CACHED 0 1.5s 166.6% 986.1 MB 86.1 MB 2024-11-06 01:57:08.462 2024-11-06 01:57:08.532 2024-11-06 01:57:10.712 2.3s 1.5s 9.5 MB 58.8 KB
HotMAPS 26 df/ed4100 HotMAPS (HotMAPS CBIOP_WXS_PRAD_BROAD) 1 CACHED 0 1h 47m 42s 374.2% 15.1 GB 2.7 GB 2024-11-06 01:57:22.628 2024-11-06 01:57:22.661 2024-11-06 03:45:04.390 1h 47m 42s 1h 47m 42s 2.7 TB 42.3 MB
MutPanning 27 11/e1384b MutPanning (MutPanning CBIOP_WXS_PRAD_BROAD) 1 CACHED 0 5m 10s 148.4% 12.4 GB 4.1 GB 2024-11-06 01:57:35.325 2024-11-06 01:57:35.402 2024-11-06 02:02:45.583 5m 10s 5m 10s 18 GB 92.8 MB
SMRegions 31 8c/fea8b0 SMRegions (SMRegions CBIOP_WXS_PRAD_BROAD) 1 CACHED 0 20.9s 132.0% 5.2 GB 703.7 MB 2024-11-06 01:57:23.024 2024-11-06 01:57:23.082 2024-11-06 01:57:44.298 21.3s 20.9s 44.7 MB 3.3 MB
Combination 33 45/c3b85e Combination (Combination CBIOP_WXS_PRAD_BROAD) 1 CACHED 0 8m 18s 100.5% 1.8 GB 150.2 MB 2024-11-06 03:45:04.444 2024-11-06 03:45:04.490 2024-11-06 03:53:23.152 8m 19s 8m 18s 23.4 MB 3.7 MB
DriverDiscovery 34 7d/f92d51 DriverDiscovery (Driver discovery CBIOP_WXS_PRAD_BROAD) 1 CACHED 0 3.2s 158.0% 1.1 GB 159.8 MB 2024-11-06 03:53:23.182 2024-11-06 03:53:23.252 2024-11-06 03:53:26.684 3.5s 3.2s 97.8 MB 26.4 KB
DriverSummary 35 c1/bef0ff DriverSummary (Driver summary) 1 CACHED 0 1s 262.2% 13.1 MB 9.8 MB 2024-11-06 03:53:26.703 2024-11-06 03:53:26.784 2024-11-06 03:53:27.963 1.3s 1s 29.8 MB 21.9 KB
DriverSaturation 36 51/b05421 DriverSaturation (Driver saturation) 1 COMPLETED 0 17.3s 108.4% 1.1 GB 276.8 MB 2024-11-06 09:05:10.330 2024-11-06 09:05:10.430 2024-11-06 09:05:28.113 17.8s 17.3s 948.7 MB 3.3 MB