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<!DOCTYPE html>
<html lang="en">
<head>
<meta charset="utf-8">
<title>Dask Performance Report</title>
<link rel="shortcut icon" href="https://docs.dask.org/en/latest/_static/images/favicon.ico" />
<script type="text/javascript" src="https://cdn.bokeh.org/bokeh/release/bokeh-2.3.0.min.js" integrity="sha384-HjagQp6T0/7bxYTAXbLotF1MLAGWmhkY5siA1Gc/pcEgvgRPtMsRn0gQtMwGKiw1" crossorigin="anonymous"></script>
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distributed client.\")\n client = exitstack.enter_context(Client(opts.parallel_address))\n else:\n logger.info(\"Initializing distributed client using LocalCluster.\")\n cluster = LocalCluster(processes=opts.parallel_nworker > 1,\n n_workers=opts.parallel_nworker,\n threads_per_worker=opts.parallel_nthread,\n memory_limit=0)\n cluster = exitstack.enter_context(cluster)\n client = exitstack.enter_context(Client(cluster))\n\n # Install Quartical Scheduler Plugin\n # Controversial from a security POV,\n # run_on_scheduler is a debugging function\n # `dask-scheduler --preload install_plugin.py`\n # is the standard but less convenient pattern\n client.run_on_scheduler(install_plugin)\n\n logger.info(\"Distributed client sucessfully initialized.\")\n\n t0 = time.time()\n\n # Reads the measurement set using the relavant configuration from opts.\n data_xds_list, ref_xds_list = read_xds_list(opts)\n data_xds_list = data_xds_list[:12]\n\n # logger.info(\"Reading data from zms.\")\n # 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core.get(self.dsk, self.outkey, dict(zip(self.inkeys, args)))\n","result = _execute_task(task, cache)\n","return func(*(_execute_task(a, cache) for a in args))\n","return_val = self.compile(tuple(argtypes))\n","cres = self._compiler.compile(args, return_type)\n","status, retval = self._compile_cached(args, return_type)\n","retval = self._compile_core(args, return_type)\n","cres = compiler.compile_extra(self.targetdescr.typing_context,\n","return pipeline.compile_extra(func)\n","return self._compile_bytecode()\n","return self._compile_core()\n","pm.run(self.state)\n","self._runPass(idx, pass_inst, state)\n","return func(*args, **kwargs)\n","mutated |= check(pss.run_pass, internal_state)\n","mangled = func(compiler_state)\n","NativeLowering().run_pass(state)\n","lower.lower()\n","self.lower_normal_function(self.fndesc)\n","entry_block_tail = self.lower_function_body()\n","self.lower_block(block)\n","self.lower_inst(inst)\n","val = self.lower_assign(ty, inst)\n","return self.lower_expr(ty, value)\n","res = self.context.special_ops[expr.op](self, expr)\n","return npyimpl.numpy_ufunc_kernel(\n","output = _build_array(context, builder, ret_ty, sig.args, arguments)\n","arg_result = context.compile_internal(\n","cres = self.compile_subroutine(builder, impl, sig, locals)\n","cres = self._compile_subroutine_no_cache(builder, impl, sig,\n","cres = compiler.compile_internal(self.typing_context, self,\n","return pipeline.compile_extra(func)\n","return self._compile_bytecode()\n","return self._compile_core()\n","pm.run(self.state)\n","self._runPass(idx, pass_inst, state)\n","return func(*args, **kwargs)\n","mutated |= check(pss.run_pass, internal_state)\n","mangled = func(compiler_state)\n","NativeLowering().run_pass(state)\n","lower.lower()\n","self.library.add_ir_module(self.module)\n","self.add_llvm_module(ll_module)\n","self._optimize_functions(ll_module)\n","fpm.run(func)\n","return ffi.lib.LLVMPY_RunFunctionPassManager(self, function)\n","ffi.lib.LLVMPY_ParseAssembly(context, strbuf, errmsg),\n","entry_block_tail = self.lower_function_body()\n","self.lower_block(block)\n","self.lower_inst(inst)\n","self.storevar(val, inst.target.name)\n","self._alloca_var(name, fetype)\n","ptr = self.alloca_lltype(name, llty)\n","sizeof = self.context.get_abi_sizeof(lltype)\n","return ty.get_abi_size(self.target_data)\n","llty = self._get_ll_pointer_type(target_data, context)\n","with parse_assembly(str(m)) as llmod:\n","ffi.lib.LLVMPY_ParseAssembly(context, strbuf, errmsg),\n","size = ffi.lib.LLVMPY_ABISizeOfElementType(self, ty)\n","typemap, return_type, calltypes, errs = type_inference_stage(\n","errs = infer.propagate(raise_errors=raise_errors)\n","errors = self.constraints.propagate(self)\n","constraint(typeinfer)\n","self.resolve(typeinfer, typeinfer.typevars, fnty=fnty)\n","sig = typeinfer.resolve_call(fnty, pos_args, kw_args)\n","return self.context.resolve_function_type(fnty, pos_args, kw_args)\n","res = self._resolve_user_function_type(func, args, kws)\n","return func.get_call_type(self, args, kws)\n","sig = temp.apply(args, kws)\n","sig = generic(args, kws)\n","sig = super(NumpyRulesArrayOperator, self).generic(args, kws)\n","return _ufunc_loop_sig(out, args)\n","arg_ndims = [a.ndim if isinstance(a, types.ArrayCompatible) else 0\n","return self._select(cases, args, kws)\n","selected = self.context.resolve_overload(self.key, cases, args, kws,\n","rating = self._rate_arguments(args, case.args, **options)\n","conv = self.can_convert(actual, formal)\n","conv = self.tm.check_compatible(fromty, toty)\n","conv = Conversion[name] if name is not None else None\n","return True\n","self._insert_var_dels()\n","return res\n","return analysis.compute_dead_maps(self.cfg, self._blocks, self.livemap,\n","return res\n","return analysis.compute_live_map(self.cfg, self._blocks,\n","return live_map\n","new_point = fix_point_progress(dct)\n","return tuple(len(v) for v in dct.values())\n","debug_print(\"END\")\n","self._insert_var_dels()\n","return res\n","return analysis.compute_use_defs(self._blocks)\n","rewrites.rewrite_registry.apply('after-inference', state)\n","post_proc.run()\n","vlt.deadmaps.combined)\n","res = instance.__dict__[self.name] = self.func(instance)\n","return analysis.compute_dead_maps(self.cfg, self._blocks, self.livemap,\n","self.new_body = guard(_inline_const_arraycall, block, func_ir,\n","return func(*args, **kwargs)\n","state = State()\n","library._ensure_finalized()\n","self.finalize()\n","self._finalize_final_module()\n","self._finalize_specific()\n","self._codegen._engine.finalize_object()\n","return old(self._ee, *args, **kwargs)\n","ffi.lib.LLVMPY_FinalizeObject(self)\n","self._codegen._mpm_full.run(self._final_module)\n","return ffi.lib.LLVMPY_RunPassManager(self, module)\n","itemsize = context.get_constant(types.intp, get_itemsize(context, arrtype))\n","return context.get_abi_sizeof(llty)\n","return ty.get_abi_size(self.target_data)\n","llty = self._get_ll_pointer_type(target_data, context)\n","with parse_assembly(str(m)) as llmod:\n","ffi.lib.LLVMPY_ParseAssembly(context, strbuf, errmsg),\n","cres = self._compile_subroutine_no_cache(builder, impl, sig,\n","cres = compiler.compile_internal(self.typing_context, self,\n","return pipeline.compile_extra(func)\n","return self._compile_bytecode()\n","return self._compile_core()\n","pm.run(self.state)\n","self._runPass(idx, pass_inst, state)\n","return func(*args, **kwargs)\n","mutated |= check(pss.run_pass, internal_state)\n","mangled = func(compiler_state)\n","NativeLowering().run_pass(state)\n","lower.lower()\n","self.init()\n","return ir_module\n","return ir_module\n","return str(out)\n","self.lower_normal_function(self.fndesc)\n","entry_block_tail = self.lower_function_body()\n","self.lower_block(block)\n","self.lower_inst(inst)\n","raise NotImplementedError(type(inst))\n","self.builder.store(value, ptr)\n","self.varmap[name] = ptr\n","return aptr\n","return ty.get_abi_size(self.target_data)\n","return target_data.get_pointee_abi_size(llty)\n","return llmod.get_global_variable(foo.name).type\n","return mod\n","return True\n","post_proc.run()\n","return self.new_body is not None\n","return func(*args, **kwargs)\n","return state.stmts if state.modified else None\n","library._ensure_finalized()\n","self.finalize()\n","self._finalize_final_module()\n","self._finalize_specific()\n","self._codegen._engine.finalize_object()\n","return old(self._ee, *args, **kwargs)\n","ffi.lib.LLVMPY_FinalizeObject(self)\n","other = other.clone()\n","return ModuleRef(ffi.lib.LLVMPY_CloneModule(self), self._context)\n","return self._library_class(self, name)\n","self._final_module = ll.parse_assembly(\n","ffi.lib.LLVMPY_ParseAssembly(context, strbuf, errmsg),\n","res = self._lower_call_normal(fnty, expr, signature)\n","res = impl(self.builder, argvals, self.loc)\n","res = self._imp(self._context, builder, self._sig, args, loc=loc)\n","return fn(*args, **kwargs)\n","res = context.compile_internal(builder, array_max_impl, sig, args)\n","cres = self.compile_subroutine(builder, impl, sig, locals)\n","cres = self._compile_subroutine_no_cache(builder, impl, sig,\n","cres = compiler.compile_internal(self.typing_context, self,\n","return pipeline.compile_extra(func)\n","return self._compile_bytecode()\n","return self._compile_core()\n","pm.run(self.state)\n","self._runPass(idx, pass_inst, state)\n","return func(*args, **kwargs)\n","mutated |= check(pss.run_pass, internal_state)\n","mangled = func(compiler_state)\n","NativeLowering().run_pass(state)\n","lower.lower()\n","self.library.add_ir_module(self.module)\n","self.add_llvm_module(ll_module)\n","self._optimize_functions(ll_module)\n","fpm.run(func)\n","return ffi.lib.LLVMPY_RunFunctionPassManager(self, function)\n","ffi.lib.LLVMPY_ParseAssembly(context, strbuf, errmsg),\n","lines += self._get_body_lines()\n","lines += [str(v) for v in self.globals.values()]\n","lines += [str(v) for v in self.globals.values()]\n","self.descr(buf)\n","self.descr_body(buf)\n","blk.descr(buf)\n","buf += [\" {0}\\n\".format(instr) for instr in self.instructions]\n","buf += [\" {0}\\n\".format(instr) for instr in self.instructions]\n","s = self.__cached_str = self._to_string()\n","buf.append(\"{0} = \".format(self.get_reference()))\n","entry_block_tail = self.lower_function_body()\n","self.lower_block(block)\n","self.lower_inst(inst)\n","val = self.lower_assign(ty, inst)\n","return self.lower_expr(ty, value)\n","res = self.lower_call(resty, expr)\n","res = self._lower_call_normal(fnty, expr, signature)\n","res = impl(self.builder, argvals, self.loc)\n","res = self._imp(self._context, builder, self._sig, args, loc=loc)\n","return fn(*args, **kwargs)\n","res = context.compile_internal(builder, take_impl, sig, args)\n","cres = self.compile_subroutine(builder, impl, sig, locals)\n","cres = self._compile_subroutine_no_cache(builder, impl, sig,\n","cres = compiler.compile_internal(self.typing_context, self,\n","return pipeline.compile_extra(func)\n","return self._compile_bytecode()\n","return self._compile_core()\n","pm.run(self.state)\n","self._runPass(idx, pass_inst, state)\n","return func(*args, **kwargs)\n","mutated |= check(pss.run_pass, internal_state)\n","mangled = func(compiler_state)\n","NativeLowering().run_pass(state)\n","lower.lower()\n","self.library.add_ir_module(self.module)\n","ll_module = ll.parse_assembly(ir)\n","ffi.lib.LLVMPY_ParseAssembly(context, strbuf, errmsg),\n","library._ensure_finalized()\n","self.finalize()\n","self._optimize_final_module()\n","self._codegen._mpm_cheap.run(self._final_module)\n","return ffi.lib.LLVMPY_RunPassManager(self, module)\n","self._finalize_specific()\n","self._codegen._engine.finalize_object()\n","return old(self._ee, *args, **kwargs)\n","ffi.lib.LLVMPY_FinalizeObject(self)\n","self._engine.add_module(module)\n","self._load_defined_symbols(module)\n","self._defined_symbols |= {gv.name for gv in gsets\n","self._defined_symbols |= {gv.name for gv in gsets\n","vp = self._next()\n","return ffi.lib.LLVMPY_GlobalsIterNext(self)\n","res = self._imp(self._context, builder, self._sig, args, loc=loc)\n","return fn(*args, **kwargs)\n","func(context, builder, sig, args,\n","nditer.iternext_specific(context, builder, result)\n","builder.position_at_end(bbend)\n","return views\n","return view\n","return context.get_abi_sizeof(llty)\n","return ty.get_abi_size(self.target_data)\n","return target_data.get_pointee_abi_size(llty)\n","return llmod.get_global_variable(foo.name).type\n","return mod\n","self._alloca_var(name, fetype)\n","ptr = self.alloca_lltype(name, llty)\n","sizeof = self.context.get_abi_sizeof(lltype)\n","return ty.get_abi_size(self.target_data)\n","llty = self._get_ll_pointer_type(target_data, context)\n","with parse_assembly(str(m)) as llmod:\n","ffi.lib.LLVMPY_ParseAssembly(context, strbuf, errmsg),\n","library._ensure_finalized()\n","self.finalize()\n","self._optimize_final_module()\n","self._codegen._mpm_full.run(self._final_module)\n","return ffi.lib.LLVMPY_RunPassManager(self, module)\n","self._finalize_specific()\n","self._codegen._engine.finalize_object()\n","return old(self._ee, *args, **kwargs)\n","ffi.lib.LLVMPY_FinalizeObject(self)\n","mod = ll.parse_assembly(ir)\n","ffi.lib.LLVMPY_ParseAssembly(context, strbuf, errmsg),\n","ary = _empty_nd_impl(context, builder, arrtype, shapes)\n","itemsize = context.get_constant(types.intp, get_itemsize(context, arrtype))\n","return context.get_abi_sizeof(llty)\n","return ty.get_abi_size(self.target_data)\n","llty = self._get_ll_pointer_type(target_data, context)\n","with parse_assembly(str(m)) as llmod:\n","ffi.lib.LLVMPY_ParseAssembly(context, strbuf, errmsg),\n","self._alloca_var(name, fetype)\n","ptr = self.alloca_lltype(name, llty)\n","sizeof = self.context.get_abi_sizeof(lltype)\n","return ty.get_abi_size(self.target_data)\n","llty = self._get_ll_pointer_type(target_data, context)\n","with parse_assembly(str(m)) as llmod:\n","ffi.lib.LLVMPY_ParseAssembly(context, strbuf, errmsg),\n","self.decref(fetype, self.builder.load(ptr))\n","self.context.nrt.decref(self.builder, typ, val)\n","self._call_incref_decref(builder, typ, value, \"NRT_decref\")\n","builder.call(fn, [mi])\n","return meminfos\n","value = self.loadvar(value_var.name)\n","return self.builder.load(ptr)\n","ld = instructions.LoadInstr(self.block, ptr, name)\n","super(LoadInstr, self).__init__(parent, ptr.type.pointee, \"load\",\n","super(Instruction, self).__init__(parent, typ, name=name)\n","ir = cgutils.normalize_ir_text(str(ir_module))\n","lines += self._get_body_lines()\n","lines += [str(v) for v in self.globals.values()]\n","lines += [str(v) for v in self.globals.values()]\n","self.descr(buf)\n","self.descr_body(buf)\n","blk.descr(buf)\n","buf += [\" {0}\\n\".format(instr) for instr in self.instructions]\n","buf += [\" {0}\\n\".format(instr) for instr in self.instructions]\n","s = self.__cached_str = self._to_string()\n","buf.append(\"{0} = \".format(self.get_reference()))\n","s = self.__cached_refstr = self._get_reference()\n","if ffi.lib.LLVMPY_VerifyModule(self, outmsg):\n","self._optimize_functions(ll_module)\n","fpm.run(func)\n","return ffi.lib.LLVMPY_RunFunctionPassManager(self, function)\n","ffi.lib.LLVMPY_SetDataLayout(self,\n","ffi.lib.LLVMPY_ParseAssembly(context, strbuf, errmsg),\n","self.context.create_cpython_wrapper(self.library, self.fndesc,\n","library.add_ir_module(wrapper_module)\n","ir = cgutils.normalize_ir_text(str(ir_module))\n","lines += self._get_body_lines()\n","lines += [str(v) for v in self.globals.values()]\n","lines += [str(v) for v in self.globals.values()]\n","self.descr(buf)\n","self.descr_body(buf)\n","blk.descr(buf)\n","buf += [\" {0}\\n\".format(instr) for instr in self.instructions]\n","buf += [\" {0}\\n\".format(instr) for instr in self.instructions]\n","s = self.__cached_str = self._to_string()\n","buf.append(\"{0} = \".format(self.get_reference()))\n","self._optimize_functions(ll_module)\n","fpm.finalize()\n","self.close()\n","self._dispose()\n","self._capi.LLVMPY_DisposePassManager(self)\n","return ffi.lib.LLVMPY_RunFunctionPassManager(self, function)\n","ffi.lib.LLVMPY_ParseAssembly(context, strbuf, errmsg),\n","baseptr = library.get_pointer_to_function(fndesc.llvm_func_name)\n","self._ensure_finalized()\n","self.finalize()\n","self._optimize_final_module()\n","self._codegen._mpm_cheap.run(self._final_module)\n","return ffi.lib.LLVMPY_RunPassManager(self, module)\n","self._finalize_specific()\n","self._codegen._engine.finalize_object()\n","return old(self._ee, *args, **kwargs)\n","ffi.lib.LLVMPY_FinalizeObject(self)\n","if not fn.is_declaration and fn.linkage == ll.Linkage.external:\n","return ffi.lib.LLVMPY_IsDeclaration(self)\n","other = other.clone()\n","return ModuleRef(ffi.lib.LLVMPY_CloneModule(self), self._context)\n","self.context.create_cfunc_wrapper(self.library, self.fndesc,\n","library.add_ir_module(wrapper_module)\n","ll_module = ll.parse_assembly(ir)\n","ffi.lib.LLVMPY_ParseAssembly(context, strbuf, errmsg),\n","return func(*args, **kwargs)\n","return np_phase_delay(lm[0], uvw[0], frequency, convention=convention)\n","return_val = self.compile(tuple(argtypes))\n","cres = self._cache.load_overload(sig, self.targetctx)\n","return self._load_overload(sig, target_context)\n","data = self._impl.rebuild(target_context, data)\n","return compiler.CompileResult._rebuild(target_context, *payload)\n","library = target_context.codegen().unserialize_library(libdata)\n","return self._library_class._unserialize(self, serialized)\n","self._finalize_final_module()\n","self._finalize_specific()\n","self._codegen._engine.finalize_object()\n","return old(self._ee, *args, **kwargs)\n","ffi.lib.LLVMPY_FinalizeObject(self)\n","mod = ModuleRef(ffi.lib.LLVMPY_ParseBitcode(\n","return cfunc\n","return self._codegen._engine.get_function_address(name)\n","return old(self._ee, *args, **kwargs)\n","return ffi.lib.LLVMPY_GetFunctionAddress(self, name.encode(\"ascii\"))\n","return np_spectral_model(stokes, spi[0], ref_freq, frequencies, base=base)\n","return_val = self.compile(tuple(argtypes))\n","cres = self._cache.load_overload(sig, self.targetctx)\n","return self._load_overload(sig, target_context)\n","data = self._cache_file.load(key)\n","return self._load_data(data_name)\n","return compiler.CompileResult._rebuild(target_context, *payload)\n","library = target_context.codegen().unserialize_library(libdata)\n","return self._library_class._unserialize(self, serialized)\n","self._shared_module = ll.parse_bitcode(shared_bitcode)\n","mod = ModuleRef(ffi.lib.LLVMPY_ParseBitcode(\n","self._finalize_specific()\n","self._codegen._engine.finalize_object()\n","return old(self._ee, *args, **kwargs)\n","ffi.lib.LLVMPY_FinalizeObject(self)\n","return cfunc\n","return self._codegen._engine.get_function_address(name)\n","return old(self._ee, *args, **kwargs)\n","return ffi.lib.LLVMPY_GetFunctionAddress(self, name.encode(\"ascii\"))\n","return (sig, codegen.magic_tuple(), (hasher(codebytes),\n","return (self._llvm_module.triple, self._get_host_cpu_name(),\n","return (ll.get_host_cpu_name()\n","return str(out)\n","","return _wrapreduction(a, np.add, 'sum', axis, dtype, out, keepdims=keepdims,\n","chunk = einsum(subscripts, *operands, dtype=dtype, **kwargs)\n","","return _nb_feed_rotation(parallactic_angles, poltype, result)\n","return_val = self.compile(tuple(argtypes))\n","cres = self._cache.load_overload(sig, self.targetctx)\n","return self._load_overload(sig, target_context)\n","data = self._impl.rebuild(target_context, data)\n","return self._load_data(data_name)\n","return compiler.CompileResult._rebuild(target_context, *payload)\n","library = target_context.codegen().unserialize_library(libdata)\n","return self._library_class._unserialize(self, serialized)\n","self._shared_module = ll.parse_bitcode(shared_bitcode)\n","mod = ModuleRef(ffi.lib.LLVMPY_ParseBitcode(\n","return self._library_class(self, name)\n","self._recorded_timings = PassTimingsCollection(ptc_name)\n","return mod\n","return ir_module\n","return str(out)\n","self._defined_symbols |= {gv.name for gv in gsets\n","self._defined_symbols |= {gv.name for gv in gsets\n","return _decode_string(ffi.lib.LLVMPY_GetValueName(self))\n","self._finalize_specific()\n","self._engine.add_module(module)\n","return self._ee.add_module(module)\n","self._modules.add(module)\n","diff = np.ediff1d(rows, to_begin=-10, to_end=-10)\n","","","result = convert_impl(np_input, mapping, in_shape,\n","output[out_idx] = fn(input[c1_idx], input[c2_idx])\n","","return _wrapreduction(a, np.logical_and, 'all', axis, None, out, keepdims=keepdims)\n","return np_gaussian(uvw[0], frequency, shape_params[0])\n","return_val = self.compile(tuple(argtypes))\n","cres = self._cache.load_overload(sig, self.targetctx)\n","return self._load_overload(sig, target_context)\n","data = self._impl.rebuild(target_context, data)\n","return compiler.CompileResult._rebuild(target_context, *payload)\n","cfunc = target_context.get_executable(library, fndesc, env)\n","return self._library_class._unserialize(self, serialized)\n","return self\n","dump(\"ASSEMBLY %s\" % self._name, self.get_asm_str(), 'asm')\n","self._codegen._engine.finalize_object()\n","return old(self._ee, *args, **kwargs)\n","ffi.lib.LLVMPY_FinalizeObject(self)\n","return self._cfn(*args, **kwargs)\n","data[0].buf_len = len(buf)\n","return cfunc\n","return self._codegen._engine.get_function_address(name)\n","return old(self._ee, *args, **kwargs)\n","return ffi.lib.LLVMPY_GetFunctionAddress(self, name.encode(\"ascii\"))\n","return np_parangles(t, ap[0], fc[0], **kw)\n","return casa_parallactic_angles(times,\n","return np.asarray([\n","[ # Set antenna position as the reference frame\n","meas_serv.posangle(fc_rad, zenith).get_value(\"rad\")\n","or _measures.doframe(self, v):\n","return self.measure(loc, rf)\n","reference_positions = [meas_serv.position(\n","return self.measure(loc, rf)\n","vis = np_predict_vis(time_index, antenna1, antenna2,\n","return_val = self.compile(tuple(argtypes))\n","cres = self._cache.load_overload(sig, self.targetctx)\n","return self._load_overload(sig, target_context)\n","data = self._impl.rebuild(target_context, data)\n","return compiler.CompileResult._rebuild(target_context, *payload)\n","library = target_context.codegen().unserialize_library(libdata)\n","return self._library_class._unserialize(self, serialized)\n","self._shared_module = ll.parse_bitcode(shared_bitcode)\n","mod = ModuleRef(ffi.lib.LLVMPY_ParseBitcode(\n","return self._load_data(data_name)\n","return np_predict_vis(time_index, antenna1, antenna2,\n","return_val = self.compile(tuple(argtypes))\n","cres = self._cache.load_overload(sig, self.targetctx)\n","return self._load_overload(sig, target_context)\n","data = self._impl.rebuild(target_context, data)\n","return compiler.CompileResult._rebuild(target_context, *payload)\n","library = target_context.codegen().unserialize_library(libdata)\n","return self._library_class._unserialize(self, serialized)\n","self._finalize_final_module()\n","self._finalize_specific()\n","self._codegen._engine.finalize_object()\n","return old(self._ee, *args, **kwargs)\n","ffi.lib.LLVMPY_FinalizeObject(self)\n","mod = ModuleRef(ffi.lib.LLVMPY_ParseBitcode(\n","return self._library_class(self, name)\n","str(self._codegen._create_empty_module(self._name)))\n","ir_module.triple = ll.get_process_triple()\n","ffi.lib.LLVMPY_GetProcessTriple(out)\n","overloads = self._load_index()\n","return future.result()\n","self._condition.wait(timeout)\n","flags = flag_col | flag_row_col[:, None, None]\n","","return _wrapreduction(a, np.logical_or, 'any', axis, None, out, keepdims=keepdims)\n","table_proxy._ex.submit(fn, row_runs,\n","self._condition.wait(timeout)\n","zarray = getattr(group, name)\n","return self.__getitem__(item)\n","return Array(self._store, read_only=self._read_only, path=path,\n","self._vindex = VIndex(self)\n","self._load_metadata_nosync()\n","self._filters = filters\n","return self._fromfile(filepath)\n","self.set_basic_selection(selection, value, fields=fields)\n","return self._set_basic_selection_nd(selection, value, fields=fields)\n","self._set_selection(indexer, value, fields=fields)\n","self._chunk_setitem(chunk_coords, chunk_selection, chunk_value, fields=fields)\n","self._chunk_setitem_nosync(chunk_coords, chunk_selection, value,\n","cdata = self._process_for_setitem(ckey, chunk_selection, value, fields=fields)\n","return self._encode_chunk(chunk)\n","if not os.path.exists(dir_path):\n","return compute_residual(data, model, gains, a1, a2, t_map_arr,\n","return_val = self.compile(tuple(argtypes))\n","cres = self._compiler.compile(args, return_type)\n","status, retval = self._compile_cached(args, return_type)\n","retval = self._compile_core(args, return_type)\n","cres = compiler.compile_extra(self.targetdescr.typing_context,\n","return pipeline.compile_extra(func)\n","return self._compile_bytecode()\n","return self._compile_core()\n","pm.run(self.state)\n","self._runPass(idx, pass_inst, state)\n","return func(*args, **kwargs)\n","mutated |= check(pss.run_pass, internal_state)\n","mangled = func(compiler_state)\n","find_literally_calls(state.func_ir, state.args)\n","raise errors.ForceLiteralArg(marked_args, loc=loc)\n","super(ForceLiteralArg, self).__init__(\n","new_msg = \"%s\\n%s\\n\" % (msg, loc.strformat())\n","lines = self.get_lines()\n","self.lines = linecache.getlines(self._get_path())\n","return updatecache(filename, module_globals)\n","path = os.path.relpath(self.filename)\n","start_list = [x for x in abspath(start).split(sep) if x]\n","return_val = self.compile(tuple(argtypes))\n","cres = self._cache.load_overload(sig, self.targetctx)\n","return self._load_overload(sig, target_context)\n","data = self._impl.rebuild(target_context, data)\n","return compiler.CompileResult._rebuild(target_context, *payload)\n","cfunc = target_context.get_executable(library, fndesc, env)\n","baseptr = library.get_pointer_to_function(fndesc.llvm_func_name)\n","return self._codegen._engine.get_function_address(name)\n","return old(self._ee, *args, **kwargs)\n","return ffi.lib.LLVMPY_GetFunctionAddress(self, name.encode(\"ascii\"))\n","return compute_corrected_residual(residual, gains, a1, a2, t_map_arr,\n","return_val = self._compile_for_args(*args)\n","return_val = self.compile(tuple(argtypes))\n","cres = self._cache.load_overload(sig, self.targetctx)\n","return self._load_overload(sig, target_context)\n","data = self._impl.rebuild(target_context, data)\n","return compiler.CompileResult._rebuild(target_context, *payload)\n","library = target_context.codegen().unserialize_library(libdata)\n","return self._library_class._unserialize(self, serialized)\n","self._codegen._engine._load_defined_symbols(self._shared_module)\n","self._defined_symbols |= {gv.name for gv in gsets\n","if not gv.is_declaration}\n","return ffi.lib.LLVMPY_IsDeclaration(self)\n","baseptr = library.get_pointer_to_function(fndesc.llvm_func_name)\n","return self._codegen._engine.get_function_address(name)\n","return old(self._ee, *args, **kwargs)\n","return ffi.lib.LLVMPY_GetFunctionAddress(self, name.encode(\"ascii\"))\n","gvaddr = self._engine.get_global_value_address(env_name)\n","return old(self._ee, *args, **kwargs)\n","return ffi.lib.LLVMPY_GetGlobalValueAddress(self, name.encode(\"ascii\"))\n","gvaddr = self._engine.get_global_value_address(env_name)\n","return old(self._ee, *args, **kwargs)\n","return ffi.lib.LLVMPY_GetGlobalValueAddress(self, name.encode(\"ascii\"))\n","return (sig, codegen.magic_tuple(), (hasher(codebytes),\n","return (self._llvm_module.triple, self._get_host_cpu_name(),\n","return (ll.get_host_cpu_name()\n","ffi.lib.LLVMPY_GetHostCPUName(out)\n","overloads = self._load_index()\n","cres = self._cache.load_overload(sig, self.targetctx)\n","return self._load_overload(sig, target_context)\n","key = self._index_key(sig, _get_codegen(target_context))\n","return (sig, codegen.magic_tuple(), (hasher(codebytes),\n","return (self._llvm_module.triple, self._get_host_cpu_name(),\n","return (ll.get_host_cpu_name()\n","ffi.lib.LLVMPY_GetHostCPUName(out)\n","return np_radec_to_lm(radec[0], phase_centre[0] if phase_centre else None)\n","return return_val\n","return cres.entry_point\n","return self._load_overload(sig, target_context)\n","return data\n","return compiler.CompileResult._rebuild(target_context, *payload)\n","return cr\n","return cfunc\n","return self._codegen._engine.get_function_address(name)\n","return old(self._ee, *args, **kwargs)\n","return ffi.lib.LLVMPY_GetFunctionAddress(self, name.encode(\"ascii\"))\n","envptr[0] = ctypes.c_void_p(id(env))\n","return old(self._ee, *args, **kwargs)\n","return ffi.lib.LLVMPY_GetGlobalValueAddress(self, name.encode(\"ascii\"))\n","return self._library_class._unserialize(self, serialized)\n","self._shared_module = ll.parse_bitcode(shared_bitcode)\n","mod = ModuleRef(ffi.lib.LLVMPY_ParseBitcode(\n","return self._load_data(data_name)\n","ret = self.first(*args, **kwargs)\n","return concatenate(arrays, axis=axes[0])\n","","return _wrapreduction(a, np.add, 'sum', axis, dtype, out, keepdims=keepdims,\n","rows = rows.result()\n","self._condition.wait(timeout)\n","return rows[np.lexsort([c.result() for c in sort_columns])]\n","self._condition.wait(timeout)\n","return func(*args, **kwargs)\n","solver(model, data, a1, a2, weights, t_map_arr, f_map_arr,\n","return_val = self.compile(tuple(argtypes))\n","cres = self._compiler.compile(args, return_type)\n","status, retval = self._compile_cached(args, return_type)\n","retval = self._compile_core(args, return_type)\n","cres = compiler.compile_extra(self.targetdescr.typing_context,\n","return pipeline.compile_extra(func)\n","return self._compile_bytecode()\n","return self._compile_core()\n","pm.run(self.state)\n","self._runPass(idx, pass_inst, state)\n","return func(*args, **kwargs)\n","mutated |= check(pss.run_pass, internal_state)\n","mangled = func(compiler_state)\n","find_literally_calls(state.func_ir, state.args)\n","raise errors.ForceLiteralArg(marked_args, loc=loc)\n","super(ForceLiteralArg, self).__init__(\n","new_msg = \"%s\\n%s\\n\" % (msg, loc.strformat())\n","lines = self.get_lines()\n","self.lines = linecache.getlines(self._get_path())\n","return path\n","return join(*rel_list)\n","return updatecache(filename, module_globals)\n","return self._load_overload(sig, target_context)\n","key = self._index_key(sig, _get_codegen(target_context))\n","return (sig, codegen.magic_tuple(), (hasher(codebytes),\n","return (self._llvm_module.triple, self._get_host_cpu_name(),\n","return (ll.get_host_cpu_name()\n","ffi.lib.LLVMPY_GetHostCPUName(out)\n","return_val = self.compile(tuple(argtypes))\n","cres = self._cache.load_overload(sig, self.targetctx)\n","return self._load_overload(sig, target_context)\n","data = self._impl.rebuild(target_context, data)\n","return compiler.CompileResult._rebuild(target_context, *payload)\n","library = target_context.codegen().unserialize_library(libdata)\n","return self._library_class._unserialize(self, serialized)\n","self._shared_module = ll.parse_bitcode(shared_bitcode)\n","mod = ModuleRef(ffi.lib.LLVMPY_ParseBitcode(\n","self._finalize_specific()\n","self._codegen._scan_and_fix_unresolved_refs(self._final_module)\n","self._rtlinker.scan_defined_symbols(module)\n","for fn in module.functions:\n","it = ffi.lib.LLVMPY_ModuleFunctionsIter(self)\n","self._defined_symbols |= {gv.name for gv in gsets\n","if not gv.is_declaration}\n","return ffi.lib.LLVMPY_IsDeclaration(self)\n","return _decode_string(ffi.lib.LLVMPY_GetValueName(self))\n","baseptr = library.get_pointer_to_function(fndesc.llvm_func_name)\n","return self._codegen._engine.get_function_address(name)\n","return old(self._ee, *args, **kwargs)\n","return ffi.lib.LLVMPY_GetFunctionAddress(self, name.encode(\"ascii\"))\n","flag_tup = tuple([np.zeros_like(g, dtype=np.uint8) for g in gain_tup])\n","","return res\n","values = self.func(*args, **kwargs)\n","","return _unpack_tuple(ret)\n","return concatenate3(transposelist(arrays, axes, extradims=extradims))\n","return 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= _main(fd, parent_sentinel)\n","return self._bootstrap(parent_sentinel)\n","self.run()\n","self._target(*self._args, **self._kwargs)\n","target(*args, **kwargs)\n","loop.run_sync(run)\n","self.start()\n","self.asyncio_loop.run_forever()\n","self._run_once()\n","handle._run()\n","self._context.run(self._callback, *self._args)\n","ret = callback()\n","return self.callback()\n","ioc = psutil.net_io_counters()\n","rawdict = _psplatform.net_io_counters()\n","lines = f.readlines()\n","return open(fname, \"rt\", **kwargs)\n","return self._proc.num_fds()\n","return fun(self, *args, **kwargs)\n","return len(os.listdir(\"%s/%s/fd\" % (self._procfs_path, self.pid)))\n","pt2 = self._proc.cpu_times()\n","return fun(self, *args, **kwargs)\n","values = self._parse_stat_file()\n","return fun(self, *args, **kwargs)\n","ret = self._cache[fun] = fun(self)\n","with open_binary(\"%s/%s/stat\" % (self._procfs_path, self.pid)) as f:\n","return open(fname, \"rb\", **kwargs)\n","ret = self._cache[fun] = fun(self)\n","return self._proc.memory_info()\n","return fun(self, *args, **kwargs)\n","with open_binary(\"%s/%s/statm\" % (self._procfs_path, self.pid)) as f:\n","return open(fname, \"rb\", **kwargs)\n","state = profile.process(\n","state = process(prev, frame, state, stop=stop)\n","state = process(prev, frame, state, stop=stop)\n","state = process(prev, frame, state, stop=stop)\n","state = process(prev, frame, state, stop=stop)\n","\"description\": info_frame(frame),\n","line = linecache.getline(co.co_filename, frame.f_lineno, frame.f_globals).lstrip()\n","lines = getlines(filename, module_globals)\n","return updatecache(filename, module_globals)\n","stat = os.stat(fullname)\n","buffer = _builtin_open(filename, 'rb')\n","first = read_or_stop()\n","return readline()\n","state = process(prev, frame, state, stop=stop)\n","\"description\": info_frame(frame),\n","line = linecache.getline(co.co_filename, frame.f_lineno, frame.f_globals).lstrip()\n","lines = getlines(filename, module_globals)\n","return updatecache(filename, module_globals)\n","with tokenize.open(fullname) as fp:\n","buffer = _builtin_open(filename, 'rb')\n","state = process(prev, frame, state, stop=stop)\n","state = process(prev, frame, state, stop=stop)\n","state = process(prev, frame, state, stop=stop)\n","state = process(prev, frame, state, stop=stop)\n","state = process(prev, frame, state, stop=stop)\n","state = process(prev, frame, state, stop=stop)\n","state = process(prev, frame, state, stop=stop)\n","state = process(prev, frame, state, stop=stop)\n","state = process(prev, frame, state, stop=stop)\n","state = process(prev, frame, state, stop=stop)\n","state = process(prev, frame, state, stop=stop)\n","state = process(prev, frame, state, stop=stop)\n","state = process(prev, frame, state, stop=stop)\n","state = process(prev, frame, state, stop=stop)\n","state = process(prev, frame, state, stop=stop)\n","\"description\": info_frame(frame),\n","line = linecache.getline(co.co_filename, frame.f_lineno, frame.f_globals).lstrip()\n","lines = getlines(filename, module_globals)\n","return updatecache(filename, module_globals)\n","with tokenize.open(fullname) as fp:\n","buffer = _builtin_open(filename, 'rb')\n","line = linecache.getline(co.co_filename, frame.f_lineno, frame.f_globals).lstrip()\n","lines = getlines(filename, module_globals)\n","return updatecache(filename, module_globals)\n","stat = os.stat(fullname)\n","line = linecache.getline(co.co_filename, frame.f_lineno, frame.f_globals).lstrip()\n","lines = getlines(filename, module_globals)\n","return updatecache(filename, module_globals)\n","with tokenize.open(fullname) as fp:\n","buffer = _builtin_open(filename, 'rb')\n","line = linecache.getline(co.co_filename, frame.f_lineno, frame.f_globals).lstrip()\n","lines = getlines(filename, module_globals)\n","return updatecache(filename, module_globals)\n","stat = os.stat(fullname)\n","line = linecache.getline(co.co_filename, frame.f_lineno, frame.f_globals).lstrip()\n","lines = getlines(filename, module_globals)\n","return updatecache(filename, module_globals)\n","lines = fp.readlines()\n","line = linecache.getline(co.co_filename, frame.f_lineno, frame.f_globals).lstrip()\n","lines = getlines(filename, module_globals)\n","return updatecache(filename, module_globals)\n","stat = os.stat(fullname)\n","buffer = _builtin_open(filename, 'rb')\n","def _gc_callback(self, phase, info):\n","line = linecache.getline(co.co_filename, frame.f_lineno, frame.f_globals).lstrip()\n","lines = getlines(filename, module_globals)\n","return updatecache(filename, module_globals)\n","with tokenize.open(fullname) as fp:\n","encoding, lines = detect_encoding(buffer.readline)\n","first = read_or_stop()\n","return readline()\n","line = linecache.getline(co.co_filename, frame.f_lineno, frame.f_globals).lstrip()\n","lines = getlines(filename, module_globals)\n","return updatecache(filename, module_globals)\n","with tokenize.open(fullname) as fp:\n","buffer = _builtin_open(filename, 'rb')\n","first = read_or_stop()\n","return readline()\n","line = linecache.getline(co.co_filename, frame.f_lineno, frame.f_globals).lstrip()\n","lines = getlines(filename, module_globals)\n","return updatecache(filename, module_globals)\n","stat = os.stat(fullname)\n","encoding, lines = detect_encoding(buffer.readline)\n","first = read_or_stop()\n","return readline()\n","await self.handle_stream(\n","msgs = await comm.read()\n","msg = await from_frames(\n","res = _from_frames()\n","return protocol.loads(\n","return msgpack.loads(\n","return merge_and_deserialize(\n","return deserialize(header, merged_frames, deserializers=deserializers)\n","deserialize(\n","return loads(header, frames)\n","return pickle.loads(x, buffers=new)\n","return pickle.loads(x)\n","return cls(factory, *args, **kwargs)\n","instance = type.__call__(cls, *args, **kwargs)\n","self._table_future = table = ex.impl.submit(factory, *args, **kwargs)\n","self._adjust_thread_count()\n","t.start()\n","self._started.wait()\n","signaled = self._cond.wait(timeout)\n","waiter.acquire()\n","self._condition.wait(timeout)\n","waiter.acquire()\n","","","","","","from quartical.statistics.statistics import (assign_interval_stats,\n","","","","","","from quartical.utils.intervals import (rfdc_to_abs_tfadc,\n","","","","","","def rfdc_to_abs_tfadc(in_col, ant1_col, ant2_col, utime_ind, n_ut, n_a):\n","return disp\n","self._cache = FunctionCache(self.py_func)\n","self.enable()\n","self._filename_base = self.get_filename_base(fullname, abiflags)\n","return self\n","return True\n","def get_residual_value_impl(data, model, r, f, c):\n","return disp\n","self._cache = FunctionCache(self.py_func)\n","self.enable()\n","return st.st_mtime, st.st_size\n","self._filename_base = self.get_filename_base(fullname, abiflags)\n","return self\n","return True\n","tempfile.TemporaryFile(dir=path).close()\n","from quartical.interpolation.interpolants import (interpolate_missing,\n","","","","","","from csaps import csaps\n","","","","","","__all__ = [\n","","","","","","","","","","","","","","","","","","","","","","self._try_inline_read()\n","pos = self._read_to_buffer_loop()\n","if self._read_to_buffer() == 0:\n","bytes_read = self.read_from_fd(buf)\n","return self.socket.recv_into(buf, len(buf))\n","self.release_key(key, cause=\"delete data\")\n","del self.data[key]\n","self.transition(ts, \"waiting\")\n","state = func(ts, **kwargs)\n","try:\n","handler_func(fileobj, events)\n","self._handle_read()\n","pos = self._read_to_buffer_loop()\n","if self._read_to_buffer() == 0:\n","bytes_read = self.read_from_fd(buf)\n","return self.socket.recv_into(buf, len(buf))\n","stream.write(b\"\")\n","self._handle_write()\n","num_bytes = self.write_to_fd(self._write_buffer.peek(size))\n","return self.socket.send(data) # type: ignore\n","await self.ensure_computing()\n","ts.runspec = await self._maybe_deserialize_task(ts)\n","function, args, kwargs = _deserialize(*ts.runspec)\n","function = loads_function(function)\n","result = pickle.loads(bytes_object)\n","return pickle.loads(x)\n","","","","","","","","","","","","import africanus.util.jax_init # noqa\n","","","","","","import jax.config\n","","","","","","","","","from .api import (\n","","","","","","from . import core\n","","","","","","","","from . import dtypes\n","","","","","","","","from .lib import xla_client\n","","","","","","from jaxlib import xla_client\n","","","","","","","","from absl import logging\n","","","","","","","","from absl import flags\n","","","","","","","","from absl.flags import _defines\n","","","","","","","","","","","","","def DEFINE_alias( # pylint: disable=invalid-name\n","","","","","","","","","","","","","class MultiEnumClassFlag(MultiFlag):\n","","","","","","","","","","","","","","","","","","","","from .tree_util import register_pytree_node\n","","","","","","","","","","","","","","","","","","","","","","","","","","","","","","","","","","","","","","from . import initializers\n","","","","","","","","import jax.numpy as jnp\n","","","","","","from . import fft\n","","","","","","","","from .lax_numpy import _not_implemented\n","","","","","","","","","","","def full(shape, fill_value, dtype=None):\n","return op\n","return docstr[:begin_idx + 1] + parameters + docstr[end_idx - 2:]\n","","","","","","","","","","","","","from jax.scipy.special import logit\n","","","","","","","","","from . import ndimage\n","","","","","","","","import scipy.ndimage\n","","","","","","from .interpolation import *\n","","","","","","from scipy import special\n","","","","","","","","from ._ellip_harm import (\n","","","","","","","","","","def zeta(x, q=None, out=None):\n","","","","","","","","","","","","","","","","","","import scipy.signal as osp_signal\n","","","","","","from .filter_design import *\n","","","","","","from scipy import special, optimize, fft as sp_fft\n","","","","","","","","from .optimize import *\n","","","","","","from ._numdiff import approx_derivative\n","","","","","","","","","","","from scipy.sparse.linalg import LinearOperator\n","","","","","","from ._onenormest import *\n","","","","","","","","","","","","","del PytestTester\n","","","","","","def qmr(A, b, x0=None, tol=1e-5, maxiter=None, M1=None, M2=None, callback=None,\n","","","","","","def non_reentrant(err_msg=None):\n","","","","","","","","","","","","del PytestTester\n","","","","","","from .arpack import *\n","","","","","","","from .minpack import _root_hybr, leastsq\n","","","","","","from ._lsq import least_squares\n","","","","","","__all__ = ['least_squares', 'lsq_linear']\n","","","","","","def lsq_linear(A, b, bounds=(-np.inf, np.inf), method='trf', tol=1e-10,\n","","","","","","","","def least_squares(\n","","","","","","def trf_no_bounds(fun, jac, x0, f0, J0, ftol, xtol, gtol, max_nfev,\n","","","","","","","from scipy import spatial\n","","","","","","","","from . import distance, transform\n","","","","","","","","","","","","","del PytestTester\n","","","","","","","","","","","def create_group(cls, group, axis='Z'):\n","","","","","","del PytestTester\n","","","","","","","","","","","","","","","","","","","","from ._trustregion_constr import _minimize_trustregion_constr\n","","","","","","from .minimize_trustregion_constr import _minimize_trustregion_constr\n","","","","","","from .canonical_constraint import (CanonicalConstraint,\n","","","","","","def equality_constrained_sqp(fun_and_constr, grad_and_jac, lagr_hess,\n","","","","","","def projections(A, method=None, orth_tol=1e-12, max_refin=3, tol=1e-15):\n","","","","","","","","","","","","","","","","","","","","","from ._linprog_ip import _linprog_ip\n","","","","","","import scikits.umfpack # test whether to use factorized\n","","","","","","","","def _linprog_highs(lp, solver, time_limit=None, presolve=True,\n","","","","","","","","","","","","","","","","from scipy import integrate, interpolate, linalg\n","","","","","","","","from ._ivp import (solve_ivp, OdeSolution, DenseOutput,\n","","","","","","","","from .interpolate import *\n","","","","","","class _ppform(PPoly):\n","","","","","","","","def splantider(tck, n=1):\n","","","","","","def splantider(tck, n=1):\n","","","","","","","","","","","","","","","","","","","","","","","","","","","","","","from scipy.stats import scoreatpercentile\n","","","","","","from .stats import *\n","","","","","","from . import distributions\n","","","","","","","","__all__ += _discrete_distns._distn_names\n","","","","","","","","__all__ = _distn_names + _distn_gen_names + ['rv_histogram']\n","self._construct_doc(docdict, dct.get(self.name))\n","self.__doc__ = self.__doc__.replace('(, ', '(').replace(', )', ')')\n","return docstring % indented\n","self.generic_moment.nin = self.numargs + 1\n","setattr(self, name, types.MethodType(ns[name], self))\n","","self.numargs = len(shapes)\n","return FullArgSpec(args, varargs, varkw, defaults, kwonlyargs,\n","return Signature.from_callable(obj, follow_wrapped=follow_wrapped)\n","return _signature_from_callable(obj, sigcls=cls,\n","return _signature_bound_method(sig)\n","return sig.replace(parameters=params)\n","return type(self)(parameters,\n","self._return_annotation = return_annotation\n","return\n","","","","","","","","","","","","","","","","","","","","","__all__ = ['boxcar', 'triang', 'parzen', 'bohman', 'blackman', 'nuttall',\n","","","","","","","from . import expon\n","","","","","","","","","","","","","","","from .lax_control_flow import (\n","","","","","","","","","","","","","","","","","","","","","","","","","from africanus.coordinates.coordinates import radec_to_lmn\n","","","","","","from astropy.coordinates import CartesianRepresentation\n","","","","","","","","","_check_requirement('erfa', __minimum_erfa_version__)\n","module = __import__(name)\n","","","","","","from .helpers import leap_seconds # noqa\n","","","","","","","","","","","","","","","","","from .configuration import *\n","","","","","","from astropy.extern.configobj import configobj, validate\n","","","","","","","","","logger.warning(\n","","","","","","","","","","","","","","","","","","","","","","","unicode_output = _config.ConfigItem(\n","module = find_current_module(2)\n","return _get_module_from_frame(frm)\n","mod = inspect.getmodule(frm)\n","os.path.realpath(f)] = module.__name__\n","path, ok = _joinrealpath(filename[:0], filename, {})\n","path, ok = _joinrealpath(path, os.readlink(newpath), seen)\n","return stat.S_ISLNK(st.st_mode)\n","_filename = getsourcefile(object) or getfile(object)\n","if os.path.exists(filename):\n","os.stat(path)\n","config.configuration.update_default_config(__package__, config_dir)\n","if path.isdir(default_cfg_dir_or_fn):\n","st = os.stat(s)\n","","","","","","class Conf(_config.ConfigNamespace):\n","log_level = _config.ConfigItem(\n","module = find_current_module(2)\n","return _get_module_from_frame(frm)\n","mod = inspect.getmodule(frm)\n","os.path.realpath(f)] = module.__name__\n","return os.path.normcase(os.path.abspath(_filename))\n","return filename\n","return True\n","","","","from .angles import *\n","","","","","","from . import angle_utilities as util\n","","","","","","","","from astropy import units as u\n","","","","","","","","from .quantity import *\n","","","","","","class Conf(_config.ConfigNamespace):\n","latex_array_threshold = _config.ConfigItem(100,\n","module = find_current_module(2)\n","return _get_module_from_frame(frm)\n","mod = inspect.getmodule(frm)\n","os.path.realpath(f)] = module.__name__\n","return abspath(path)\n","return path, True\n","return stat.S_ISLNK(st.st_mode)\n","","","","","","","","","","","from . import scipy_special, erfa\n","","","","","","","","","logger.warning(\n","from . import format as unit_format\n","","","","","","","","","","","","","from .latex import Latex, LatexInline\n","","","","","","class LatexInline(Latex):\n","return cls\n","logger.warning(\n","","","","","","","","","","","","","","","def_unit(['A', 'ampere', 'amp'], namespace=_ns, prefixes=True,\n","return result\n","PrefixUnit(names, CompositeUnit(factor, [u], [1],\n","self._expand_and_gather(decompose=decompose,\n","return scale\n","return super().__call__(\n","NamedUnit.__init__(self, st, namespace=namespace, doc=doc,\n","self._inject(namespace)\n","return w.fill(text)\n","return \"\\n\".join(self.wrap(text))\n","return self._wrap_chunks(chunks)\n","return self._split(text)\n","return text\n","self._inject(namespace)\n","return text\n","","","","","","from . import cgs # noqa\n","","","","","","","","","","","","return _get_module_from_frame(frm)\n","mod = inspect.getmodule(frm)\n","os.path.realpath(f)] = module.__name__\n","return abspath(path)\n","return path, True\n","return stat.S_ISLNK(st.st_mode)\n","__doc__ += _generate_unit_summary(globals())\n","return docstring.getvalue()\n","yield (unit, doc, represents, aliases, 'Yes' if unit.name in has_prefixes else 'No')\n","units.sort(key=lambda x: x.name.lower())\n","return self._names[0]\n","return result\n","PrefixUnit(names, CompositeUnit(factor, [u], [1],\n","self._expand_and_gather(decompose=decompose,\n","return context\n","return self.add_enabled_units(units)\n","self._by_physical_type.setdefault(hash, set()).add(unit)\n","self.unit.to(inst.unit)\n","return self._unit\n","return val\n","return Unit(self._unit_string)\n","return f.parse(s)\n","return result\n","return cls._parser.parse(s, lexer=cls._lexer, debug=debug)\n","return val\n","return cls._make_parser()\n","return parser\n","","","","","","","","","","","","","","","get_current_unit_registry().set_enabled_units(units)\n","return self.add_enabled_units(units)\n","self._by_physical_type.setdefault(hash, set()).add(unit)\n","def __hash__(self):\n","r = zip([x.name for x in unit.bases], unit.powers)\n","r = zip([x.name for x in unit.bases], unit.powers)\n","@property\n","return self._represents.decompose(bases=bases)\n","x = CompositeUnit(self.scale, self.bases, self.powers, decompose=True,\n","self._expand_and_gather(decompose=decompose,\n","def _expand_and_gather(self, decompose=False, bases=set()):\n","from .fk5 import FK5\n","","","","","","","","","","from astropy.coordinates import earth_orientation as earth\n","","","","","","","","jd1950 = Time('B1950').jd\n","update_leap_seconds()\n","from astropy.utils import iers\n","","","","","","","","from .iers import *\n","","","","","","from astropy.table import QTable, MaskedColumn\n","","","","","","from .column import Column, MaskedColumn, StringTruncateWarning, ColumnInfo\n","","","","","","","","class MaskedColumn(Column, _MaskedColumnGetitemShim, ma.MaskedArray):\n","","","","","","","class Conf(_config.ConfigNamespace):\n","jquery_url = _config.ConfigItem(\n","module = find_current_module(2)\n","return _get_module_from_frame(frm)\n","mod = inspect.getmodule(frm)\n","os.path.realpath(f)] = module.__name__\n","return abspath(path)\n","return path, True\n","return stat.S_ISLNK(st.st_mode)\n","","","","","","","from .core import (InconsistentTableError,\n","","","","","","def _get_writer(Writer, fast_writer, **kwargs):\n","","","","","","","","class FastRdb(FastBasic):\n","","","","","","","","","","","","","","","","","","","","","","class Conf(_config.ConfigNamespace):\n","enable_record_valued_keyword_cards = _config.ConfigItem(\n","module = find_current_module(2)\n","return _get_module_from_frame(frm)\n","mod = inspect.getmodule(frm)\n","os.path.realpath(f)] = module.__name__\n","path, ok = _joinrealpath(filename[:0], filename, {})\n","if not islink(newpath):\n","return stat.S_ISLNK(st.st_mode)\n","","","","","","","","","","","","","from .diff import FITSDiff, HDUDiff\n","","","","","","from .hdu.hdulist import fitsopen, HDUList # pylint: disable=W0611\n","","","","","","","","","from .streaming import StreamingHDU\n","","","","","","","","","","","from .table import BinTableHDU\n","","","","","","","","","","","","","def _check_padding(header_str, block_size, is_eof, check_block_size=True):\n","","","","","","","","","","from .table import (\n","","","","","","from . import tree\n","","","","","","","","","","","","","","","","","","","","auto_colname = _config.ConfigItem(\n","module = find_current_module(2)\n","return _get_module_from_frame(frm)\n","mod = inspect.getmodule(frm)\n","os.path.realpath(f)] = module.__name__\n","return abspath(path)\n","return path, True\n","return stat.S_ISLNK(st.st_mode)\n","","","","","","","","class TableWrite(registry.UnifiedReadWrite):\n","","","","","","","","datafn = _find_pkg_data_path(fs_path, package=package)\n","return path\n","return modb\n","return mod\n","return sys.modules.get(modulesbyfile[file])\n","return os.path.normcase(os.path.abspath(_filename))\n","return filename\n","return True\n","good_enough = cls._today() + TimeDelta(180-_none_to_float(conf.auto_max_age),\n","return Time(s, scale='tai', format='iso', out_subfmt='date')\n","self._init_from_vals(val, val2, format, scale, copy,\n","self._time = self._get_time_fmt(val, val2, format, scale,\n","return cls(val, val2, scale, precision, in_subfmt, out_subfmt)\n","self.set_jds(val1, val2)\n","jd1, jd2 = self.get_jds_fast(val1, val2)\n","status = self.lib_parse_time.parse_ymdhms_times(\n","val = self.fget.__wrapped__(objtype)\n","libpt = npct.load_library(\"_parse_times\", Path(__file__).parent)\n","from numpy.distutils.misc_util import get_shared_lib_extension\n","","","","","","","","","from . import __config__\n","","","","","","","","","","","","","setattr(_m, 'gen_lib_options', gen_lib_options)\n","","","","","","","","def gen_lib_options (compiler, library_dirs, runtime_library_dirs, libraries):\n","","","","","","","","","","","","","","","","replace_method(UnixCCompiler, 'create_static_lib',\n","","","","","","","","","","","","confvars = distutils.sysconfig.get_config_vars()\n","return real_vars\n","return _config_vars\n","_config_vars.update(build_time_vars)\n","","","","","","","","file = download_file(file, cache=cache)\n","return utils.data.download_file(*args, **kwargs)\n","dldir = _get_download_cache_loc(pkgname)\n","if not os.path.exists(datadir):\n","os.stat(path)\n","table, expires = cls.validate(table)\n","expires = datetime.strptime(isot.partition('T')[0],\n","","","","","","","","return out.data if isinstance(out, np.ma.MaskedArray) else out\n","return data\n","","","","","","","","","from .core import * # noqa\n","","","","","","from .core import Time, TIME_SCALES, TIME_DELTA_SCALES, ScaleValueError # noqa\n","","","","","","","","","","","def update_leap_seconds(files=None):\n","","","","","","","","","","","","","","","","","","","","","","","","","","","","","","","","","","","","from .attributes import Attribute\n","","","","","","from .earth import EarthLocation\n","","","","","","from astropy.utils import data\n","","","","","","","","class Conf(_config.ConfigNamespace):\n","dataurl = _config.ConfigItem(\n","module = find_current_module(2)\n","return _get_module_from_frame(frm)\n","mod = inspect.getmodule(frm)\n","os.path.realpath(f)] = module.__name__\n","return os.path.normcase(os.path.abspath(_filename))\n","return filename\n","return True\n","return abspath(path)\n","return path, True\n","return stat.S_ISLNK(st.st_mode)\n","from .sky_coordinate import SkyCoord\n","","","","","","","","","","","","","","","","","","","disp.enable_caching()\n","self._cache = FunctionCache(self.py_func)\n","self._impl = self._impl_class(py_func)\n","locator = cls.from_function(py_func, source_path)\n","self.ensure_cache_path()\n","os.makedirs(path, exist_ok=True)\n","if not exist_ok or not path.isdir(name):\n","st = os.stat(s)\n","from africanus.rime.zernike import zernike_dde\n","","","","","","def fac(x):\n","return disp\n","self._cache = FunctionCache(self.py_func)\n","self.enable()\n","self._filename_base = self.get_filename_base(fullname, abiflags)\n","return self\n","return True\n","tempfile.TemporaryFile(dir=path).close()\n","raise\n","return True\n","","","from africanus.model.spectral.spec_model import spectral_model\n","","","","","","pass\n","return disp\n","self._cache = FunctionCache(self.py_func)\n","self.enable()\n","self._filename_base = self.get_filename_base(fullname, abiflags)\n","return self\n","return True\n","from africanus.model.shape.shapelets import shapelet, shapelet_1d\n","","","","","","def phase_steer_and_w_correct(uvw, lm_source_center, frequency):\n","return disp\n","self._cache = FunctionCache(self.py_func)\n","self.enable()\n","self._filename_base = self.get_filename_base(fullname, abiflags)\n","return self\n","tempfile.TemporaryFile(dir=path).close()\n","return _io.open(fd, mode, buffering=buffering,\n","cres = self._cache.load_overload(sig, self.targetctx)\n","return self._load_overload(sig, target_context)\n","data = self._impl.rebuild(target_context, data)\n","return compiler.CompileResult._rebuild(target_context, *payload)\n","library = target_context.codegen().unserialize_library(libdata)\n","return self._library_class._unserialize(self, serialized)\n","self._finalize_final_module()\n","return mod\n","return self._cfn(*args, **kwargs)\n","return cfunc\n","return self._codegen._engine.get_function_address(name)\n","return old(self._ee, *args, **kwargs)\n","return ffi.lib.LLVMPY_GetFunctionAddress(self, name.encode(\"ascii\"))\n","return self._cfn(*args, **kwargs)\n","from .conversion import convert\n","","","","","","pass\n","","","","","","","","","","","","","","","","","","","","","from quartical.flagging.flagging_kernels import madmax, threshold\n","","","","","","","","","","","from ._logger import Core as _Core\n","","","","","","from ._file_sink import FileSink\n","","","","","","","","","","","return pickle.loads(x)\n","self.__init__(*state)\n","meta_bytes = store[mkey]\n","return self._fromfile(filepath)\n","with open(fn, 'rb') as f:\n","return key in store\n","return os.path.isfile(file_path)\n","st = os.stat(path)\n","response = await retry_operation(\n","return await retry(\n","return await coro()\n","result = await send_recv(comm=comm, op=key, **kwargs)\n","response = await comm.read(deserializers=deserializers)\n","frames_nbytes = await stream.read_bytes(fmt_size)\n","self._try_inline_read()\n","pos = self._read_to_buffer_loop()\n","if self._read_to_buffer() == 0:\n","bytes_read = self.read_from_fd(buf)\n","return self.socket.recv_into(buf, len(buf))\n","stream.write(b\"\")\n","self._handle_write()\n","num_bytes = self.write_to_fd(self._write_buffer.peek(size))\n","return self.socket.send(data) # type: ignore\n","data = self._ssock.recv(4096)\n","lambda f: self._run_callback(functools.partial(callback, future))\n","ret = callback()\n","self.ctx_run(self.run)\n","return\n","return False\n","return dispatch(args[0].__class__)(*args, **kw)\n","return _wrap_awaitable(yielded) # type: ignore\n","return task\n","return task\n","self.data.add(ref(item, self._remove))\n","return\n","return core.get(self.dsk, self.outkey, dict(zip(self.inkeys, args)))\n","result = _execute_task(task, cache)\n","return func(*(_execute_task(a, cache) for a in args))\n","table_proxy._ex.submit(fn, row_runs,\n","self._condition.wait(timeout)\n","zarray[selection] = data\n","self.set_basic_selection(selection, value, fields=fields)\n","return self._set_basic_selection_nd(selection, value, fields=fields)\n","self._set_selection(indexer, value, fields=fields)\n","self._chunk_setitem(chunk_coords, chunk_selection, chunk_value, fields=fields)\n","self._chunk_setitem_nosync(chunk_coords, chunk_selection, value,\n","cdata = self._process_for_setitem(ckey, chunk_selection, value, fields=fields)\n","return self._encode_chunk(chunk)\n","self._tofile(value, 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**self._kwargs)\n","loop.start()\n","self.asyncio_loop.run_forever()\n","self._run_once()\n","handle._run()\n","self._context.run(self._callback, *self._args)\n","data = self._ssock.recv(4096)\n","ret = callback()\n","return self.callback()\n","num_fds = self.proc.num_fds()\n","return self._proc.num_fds()\n","return fun(self, *args, **kwargs)\n","return len(os.listdir(\"%s/%s/fd\" % (self._procfs_path, self.pid)))\n","rawdict = _psplatform.net_io_counters()\n","lines = f.readlines()\n","return open(fname, \"rt\", **kwargs)\n","pt2 = self._proc.cpu_times()\n","return fun(self, *args, **kwargs)\n","values = self._parse_stat_file()\n","return fun(self, *args, **kwargs)\n","ret = self._cache[fun] = fun(self)\n","data = f.read()\n","return open(fname, \"rb\", **kwargs)\n","ret = self._cache[fun] = fun(self)\n","return self._proc.memory_info()\n","return fun(self, *args, **kwargs)\n","with open_binary(\"%s/%s/statm\" % (self._procfs_path, self.pid)) as f:\n","return open(fname, \"rb\", **kwargs)\n","if self.proc.cpu_percent() < 50:\n","pt2 = self._proc.cpu_times()\n","return fun(self, *args, **kwargs)\n","values = self._parse_stat_file()\n","return fun(self, *args, **kwargs)\n","return fun(self)\n","with open_binary(\"%s/%s/stat\" % (self._procfs_path, self.pid)) as f:\n","return open(fname, \"rb\", **kwargs)\n","handler_func(fileobj, events)\n","self._handle_read()\n","pos = self._read_to_buffer_loop()\n","if self._read_to_buffer() == 0:\n","bytes_read = self.read_from_fd(buf)\n","return self.socket.recv_into(buf, len(buf))\n","frames = await to_frames(\n","return _to_frames()\n","protocol.dumps(\n","frames[0] = msgpack.dumps(msg, default=_encode_default, use_bin_type=True)\n","return Packer(**kwargs).pack(o)\n","sub_header, sub_frames = serialize_and_split(\n","header, frames = serialize(x, serializers, on_error, context)\n","return serialize(\n","header, frames = dumps(x, context=context) if wants_context else dumps(x)\n","header, frames = dumps(x, context=context)\n","data = x.ravel(order=\"K\")\n","self._handle_write()\n","num_bytes = self.write_to_fd(self._write_buffer.peek(size))\n","return self.socket.send(data) # type: ignore\n","await self.handle_stream(comm=comm, extra={\"client\": client})\n","handler(**merge(extra, msg))\n","stripped_deps = {\n","k: v.intersection(dsk_keys)\n","ts = parent.new_task(k, tasks.get(k), \"released\")\n","self._task_groups[group_key] = tg = TaskGroup(group_key)\n","self._types = set()\n","terminal_deps[tn] = unravel_deps(dependencies, tn)\n","return unravelled_deps\n","return unravelled_deps\n","return unravelled_deps\n","return unravelled_deps\n","return unravelled_deps\n","return unravelled_deps\n","return unravelled_deps\n","return unravelled_deps\n","parent._transitions(recommendations, client_msgs, worker_msgs)\n","new = self._transition(key, finish)\n","a: tuple = func(key, *args, **kwargs)\n","self._n_tasks += 1\n","self._scheduler_identity = await self.scheduler.identity()\n","result 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