.gitignore

syntax: glob

## vim temporary files
.*.swp

## GNU auto-tools generated files
config.h
config.h.in
config.log
config.status
config/ltmain.sh
config/compile

INSTALL

## Distribution tarballs
fastx*.tar.bz2

## Intermediate files
*.o
*.a
*.Po
Makefile
Makefile.in
libtool
*.m4
autom4te.cache/*
configure
stamp-h1

## The compiled binaries
src/fastx_collapser/fastx_collapser
src/fastx_reverse_complement/fastx_reverse_complement
src/fastx_trimmer/fastx_trimmer
src/fastq_quality_filter/fastq_quality_filter
src/fastq_to_fasta/fastq_to_fasta
src/fasta_nucleotide_changer/fasta_nucleotide_changer
src/fastx_quality_stats/fastx_quality_stats
src/fasta_formatter/fasta_formatter
src/fastx_uncollapser/fastx_uncollapser
src/fastx_renamer/fastx_renamer
src/fastq_quality_trimmer/fastq_quality_trimmer
src/fastx_artifacts_filter/fastx_artifacts_filter
src/fastx_clipper/fastx_clipper
src/fastq_quality_converter/fastq_quality_converter
src/seqalign_test/seqalign_test
src/fastq_masker/fastq_masker