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fix typos

fix typos #125

Workflow file for this run

name: Tests
on:
push:
branches: [ '**' ]
pull_request:
branches: [ main, dev, web ]
jobs:
matrix_prep:
name: Initial setup
runs-on: ubuntu-latest
outputs:
matrix: ${{ steps.set-matrix.outputs.matrix }}
steps:
# Required as the JSON input file needs to be read
- uses: actions/checkout@v3
- name: Conditional Build Matrix
id: set-matrix
uses: JoshuaTheMiller/conditional-build-matrix@main
with:
# Filtering the default input file: '.github/workflows/matrix_includes.json'
# using JMESPath https://jmespath.org/examples.html
filter: "[? '${{ secrets.LMFDB_CI_ACCESS }}' || server == 'devmirror']"
test:
runs-on: ubuntu-latest
needs: matrix_prep
strategy:
fail-fast: false
matrix: ${{fromJson(needs.matrix_prep.outputs.matrix)}}
name: ${{matrix.server}} ${{matrix.folders}}
steps:
- uses: actions/checkout@v3
- uses: conda-incubator/setup-miniconda@v2
with:
activate-environment: lmfdb
auto-activate-base: false
# environment-file: .environment.yml # now we install after cache
channel-priority: strict
# IMPORTANT: use-only-tar-bz2: true needs to be set for caching to work properly!
use-only-tar-bz2: true
- name: Cache conda
uses: actions/cache@v3
id: condacache
env:
# Increase this value to reset cache if .environment.yml has not changed
CACHE_NUMBER: 0
with:
path: |
/usr/share/miniconda/envs/lmfdb
key:
${{ runner.os }}-conda-${{ env.CACHE_NUMBER }}-${{
hashFiles('.environment.yml') }}
- name: Run install script
# Only need to run install when deps has been changed
if: steps.condacache.outputs.cache-hit != 'true'
run: conda env create -f .environment.yml || conda env update -f .environment.yml
- name: Show conda info
shell: bash -l {0}
run: |
conda info
conda list
- name: Cache pip
uses: actions/cache@v3
with:
# This path is specific to Ubuntu
path: ~/.cache/pip
# Look to see if there is a cache hit for the corresponding requirements file
key: ${{ runner.os }}-pip-${{ hashFiles('requirements.txt') }}
restore-keys: |
${{ runner.os }}-pip-
${{ runner.os }}-
- name: pip stuff
shell: bash -l {0}
run: |
sage -pip install -r requirements.txt
pip install pyflakes pylint pycodestyle
- name: checking that we didn't miss any test files
shell: bash -l {0}
# If this fails you need to update the file list above and file count
run: test $(find lmfdb -name 'test_*.py' -or -name '*_test.py' | wc -l) -eq 41
- name: Config LMFDB to run tests against proddb
if: matrix.files != 'lint' && matrix.server == 'proddb'
env:
LMFDB_CI_ACCESS: ${{ secrets.LMFDB_CI_ACCESS }}
shell: bash -l {0}
run: |
sage -python lmfdb/utils/config.py --postgresql-host proddb.lmfdb.xyz --postgresql-pass "$LMFDB_CI_ACCESS"
- name: Run LMFDB tests
if: matrix.files != 'lint'
shell: bash -l {0}
run: tox -e tests -- ${{ matrix.files}}
- name: Run linting
if: matrix.files == 'lint'
shell: bash -l {0}
run: tox -e lint