-
Notifications
You must be signed in to change notification settings - Fork 5
/
1.6.0-DEV-cbd854b0f4.log
401 lines (400 loc) · 29.8 KB
/
1.6.0-DEV-cbd854b0f4.log
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
Julia Version 1.6.0-DEV.185
Commit cbd854b0f4 (2020-06-06 13:20 UTC)
Platform Info:
OS: Linux (x86_64-pc-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-9.0.1 (ORCJIT, skylake)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
Installed DataValueInterfaces ───────── v1.0.0
Installed NearestNeighbors ──────────── v0.4.4
Installed Tables ────────────────────── v1.0.4
Installed IterTools ─────────────────── v1.3.0
Installed OrderedCollections ────────── v1.2.0
Installed DataStructures ────────────── v0.17.17
Installed Impute ────────────────────── v0.5.0
Installed StaticArrays ──────────────── v0.12.3
Installed DataAPI ───────────────────── v1.3.0
Installed Distances ─────────────────── v0.8.2
Installed TableTraits ───────────────── v1.0.0
Installed Missings ──────────────────── v0.4.3
Installed TableOperations ───────────── v0.2.1
Installed SortingAlgorithms ─────────── v0.3.1
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed StatsBase ─────────────────── v0.32.2
Updating `~/.julia/environments/v1.6/Project.toml`
[f7bf1975] + Impute v0.5.0
Updating `~/.julia/environments/v1.6/Manifest.toml`
[9a962f9c] + DataAPI v1.3.0
[864edb3b] + DataStructures v0.17.17
[e2d170a0] + DataValueInterfaces v1.0.0
[b4f34e82] + Distances v0.8.2
[f7bf1975] + Impute v0.5.0
[c8e1da08] + IterTools v1.3.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[e1d29d7a] + Missings v0.4.3
[b8a86587] + NearestNeighbors v0.4.4
[bac558e1] + OrderedCollections v1.2.0
[a2af1166] + SortingAlgorithms v0.3.1
[90137ffa] + StaticArrays v0.12.3
[2913bbd2] + StatsBase v0.32.2
[ab02a1b2] + TableOperations v0.2.1
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v1.0.4
[2a0f44e3] + Base64
[8ba89e20] + Distributed
[b77e0a4c] + InteractiveUtils
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[de0858da] + Printf
[9a3f8284] + Random
[9e88b42a] + Serialization
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[4ec0a83e] + Unicode
Testing Impute
Status `/tmp/jl_rIkCqK/Project.toml`
[39de3d68] AxisArrays v0.4.3
[861a8166] Combinatorics v1.0.2
[a93c6f00] DataFrames v0.21.2
[b4f34e82] Distances v0.8.2
[f7bf1975] Impute v0.5.0
[c8e1da08] IterTools v1.3.0
[e1d29d7a] Missings v0.4.3
[b8a86587] NearestNeighbors v0.4.4
[ce6b1742] RDatasets v0.6.8
[2913bbd2] StatsBase v0.32.2
[ab02a1b2] TableOperations v0.2.1
[bd369af6] Tables v1.0.4
[ade2ca70] Dates
[37e2e46d] LinearAlgebra
[9a3f8284] Random
[10745b16] Statistics
[8dfed614] Test
Status `/tmp/jl_rIkCqK/Manifest.toml`
[39de3d68] AxisArrays v0.4.3
[336ed68f] CSV v0.6.2
[324d7699] CategoricalArrays v0.8.1
[944b1d66] CodecZlib v0.7.0
[861a8166] Combinatorics v1.0.2
[34da2185] Compat v3.10.0
[9a962f9c] DataAPI v1.3.0
[a93c6f00] DataFrames v0.21.2
[864edb3b] DataStructures v0.17.17
[e2d170a0] DataValueInterfaces v1.0.0
[b4f34e82] Distances v0.8.2
[da5c29d0] EllipsisNotation v0.4.0
[e2ba6199] ExprTools v0.1.1
[8f5d6c58] EzXML v1.1.0
[5789e2e9] FileIO v1.3.0
[48062228] FilePathsBase v0.8.0
[f7bf1975] Impute v0.5.0
[8197267c] IntervalSets v0.5.1
[41ab1584] InvertedIndices v1.0.0
[c8e1da08] IterTools v1.3.0
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.0
[94ce4f54] Libiconv_jll v1.16.0+2
[e1d29d7a] Missings v0.4.3
[78c3b35d] Mocking v0.7.1
[b8a86587] NearestNeighbors v0.4.4
[bac558e1] OrderedCollections v1.2.0
[69de0a69] Parsers v1.0.5
[2dfb63ee] PooledArrays v0.5.3
[df47a6cb] RData v0.7.2
[ce6b1742] RDatasets v0.6.8
[b3c3ace0] RangeArrays v0.3.2
[3cdcf5f2] RecipesBase v1.0.1
[189a3867] Reexport v0.2.0
[ae029012] Requires v1.0.1
[a2af1166] SortingAlgorithms v0.3.1
[90137ffa] StaticArrays v0.12.3
[2913bbd2] StatsBase v0.32.2
[ab02a1b2] TableOperations v0.2.1
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v1.0.4
[f269a46b] TimeZones v1.2.0
[3bb67fe8] TranscodingStreams v0.9.5
[ea10d353] WeakRefStrings v0.6.2
[02c8fc9c] XML2_jll v2.9.9+4
[83775a58] Zlib_jll v1.2.11+10
[2a0f44e3] Base64
[ade2ca70] Dates
[8bb1440f] DelimitedFiles
[8ba89e20] Distributed
[9fa8497b] Future
[b77e0a4c] InteractiveUtils
[76f85450] LibGit2
[8f399da3] Libdl
[37e2e46d] LinearAlgebra
[56ddb016] Logging
[d6f4376e] Markdown
[a63ad114] Mmap
[44cfe95a] Pkg
[de0858da] Printf
[3fa0cd96] REPL
[9a3f8284] Random
[ea8e919c] SHA
[9e88b42a] Serialization
[1a1011a3] SharedArrays
[6462fe0b] Sockets
[2f01184e] SparseArrays
[10745b16] Statistics
[8dfed614] Test
[cf7118a7] UUIDs
[4ec0a83e] Unicode
WARNING: Impute.Drop is deprecated, use DropObs instead.
likely near /home/pkgeval/.julia/packages/Impute/GmIMg/test/runtests.jl:16
SRS: Test Failed at /home/pkgeval/.julia/packages/Impute/GmIMg/test/runtests.jl:361
Expression: result == expected
Evaluated: Union{Missing, Float64}[1.0, 20.0, 8.0, 4.0, 5.0, 6.0, 14.0, 8.0, 9.0, 10.0, 11.0, 12.0, 13.0, 14.0, 15.0, 16.0, 17.0, 18.0, 19.0, 20.0] == Union{Missing, Float64}[1.0, 9.0, 16.0, 4.0, 5.0, 6.0, 17.0, 8.0, 9.0, 10.0, 11.0, 12.0, 13.0, 14.0, 15.0, 16.0, 17.0, 18.0, 19.0, 20.0]
Stacktrace:
[1] top-level scope at /home/pkgeval/.julia/packages/Impute/GmIMg/test/runtests.jl:361
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Test/src/Test.jl:1115
[3] top-level scope at /home/pkgeval/.julia/packages/Impute/GmIMg/test/runtests.jl:355
[4] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Test/src/Test.jl:1115
[5] top-level scope at /home/pkgeval/.julia/packages/Impute/GmIMg/test/runtests.jl:56
┌ Warning: `map(f::Base.Callable, gd::GroupedDataFrame)` is deprecated, use `combine(f, gd, ungroup = false)` instead.
│ caller = top-level scope at runtests.jl:430
└ @ Core ~/.julia/packages/Impute/GmIMg/test/runtests.jl:430
┌ Warning: Passing a tuple (:hod, :obj) of column selectors when sorting data frame is deprecated. Pass a vector [:hod, :obj] instead.
│ caller = sort(::DataFrame, ::Tuple{Symbol,Symbol}; alg::Nothing, lt::Function, by::Function, rev::Bool, order::Base.Order.ForwardOrdering) at sort.jl:353
└ @ DataFrames ~/.julia/packages/DataFrames/kwVTY/src/abstractdataframe/sort.jl:353
┌ Warning: impute(data, args...; kwargs...) is deprecated.
│ Please use Impute.method(data) or impute(data, imputor::Imputor).
│ caller = ip:0x0
└ @ Core :-1
┌ Warning: impute!(data, method) is deprecated.
│ Please use Impute.method!(data) or impute!(data, imputor::Imputor).
│ caller = ip:0x0
└ @ Core :-1
┌ Warning: Passing `limit` directly to impute functions is deprecated. Please pass `context=Context(; limit=0.2)` in the future.
└ @ Impute ~/.julia/packages/Impute/GmIMg/src/deprecated.jl:174
┌ Warning: Passing `limit` directly to impute functions is deprecated. Please pass `context=Context(; limit=0.2)` in the future.
└ @ Impute ~/.julia/packages/Impute/GmIMg/src/deprecated.jl:174
┌ Warning: `Fill(val; kwargs...)` is deprecated, use `Fill(; value = val, kwargs...)` instead.
│ caller = ip:0x0
└ @ Core :-1
┌ Warning: Passing `limit` directly to impute functions is deprecated. Please pass `context=Context(; limit=0.2)` in the future.
└ @ Impute ~/.julia/packages/Impute/GmIMg/src/deprecated.jl:174
┌ Warning: Passing `limit` directly to impute functions is deprecated. Please pass `context=Context(; limit=0.2)` in the future.
└ @ Impute ~/.julia/packages/Impute/GmIMg/src/deprecated.jl:174
┌ Warning: impute(data, args...; kwargs...) is deprecated.
│ Please use Impute.method(data) or impute(data, imputor::Imputor).
│ caller = top-level scope at deprecated.jl:111
└ @ Core ~/.julia/packages/Impute/GmIMg/test/deprecated.jl:111
┌ Warning: impute!(data, method) is deprecated.
│ Please use Impute.method!(data) or impute!(data, imputor::Imputor).
│ caller = impute(::Array{Union{Missing, Float64},1}, ::Symbol; kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at deprecated.jl:96
└ @ Impute ~/.julia/packages/Impute/GmIMg/src/deprecated.jl:96
┌ Warning: chain(data, args...) is deprecated.
│ Please use result = imp1(data) |> imp2 |> imp3
│ caller = ip:0x0
└ @ Core :-1
┌ Warning: chain!(data, imputors...) is deprecated.
│ Please use data = imp1(data) |> imp2 |> imp3
│ caller = ip:0x0
└ @ Core :-1
WARNING: Impute.Drop is deprecated, use DropObs instead.
likely near /home/pkgeval/.julia/packages/Impute/GmIMg/test/deprecated.jl:1
WARNING: Impute.Drop is deprecated, use DropObs instead.
likely near /home/pkgeval/.julia/packages/Impute/GmIMg/test/deprecated.jl:1
┌ Warning: Passing `limit` directly to impute functions is deprecated. Please pass `context=Context(; limit=1.0)` in the future.
└ @ Impute ~/.julia/packages/Impute/GmIMg/src/deprecated.jl:174
┌ Warning: dropobs! did not mutate input data of type Matrix
└ @ Main ~/.julia/packages/Impute/GmIMg/test/testutils.jl:121
┌ Warning: dropobs! did not mutate input data of type DataFrame
└ @ Main ~/.julia/packages/Impute/GmIMg/test/testutils.jl:190
┌ Warning: dropobs! did not mutate input data of type AxisArray
└ @ Main ~/.julia/packages/Impute/GmIMg/test/testutils.jl:297
┌ Warning: dropobs! did not mutate input data of column table
└ @ Main ~/.julia/packages/Impute/GmIMg/test/testutils.jl:330
┌ Warning: dropvars! did not mutate input data of type Matrix
└ @ Main ~/.julia/packages/Impute/GmIMg/test/testutils.jl:121
┌ Warning: dropvars! did not mutate input data of type DataFrame
└ @ Main ~/.julia/packages/Impute/GmIMg/test/testutils.jl:190
┌ Warning: dropvars! did not mutate input data of type AxisArray
└ @ Main ~/.julia/packages/Impute/GmIMg/test/testutils.jl:297
┌ Warning: dropvars! did not mutate input data of column table
└ @ Main ~/.julia/packages/Impute/GmIMg/test/testutils.jl:330
┌ Warning: dropvars! did not mutate input data of row table
└ @ Main ~/.julia/packages/Impute/GmIMg/test/testutils.jl:364
┌ Warning: interpolate! did not mutate input data of row table
└ @ Main ~/.julia/packages/Impute/GmIMg/test/testutils.jl:364
┌ Warning: fill! did not mutate input data of row table
└ @ Main ~/.julia/packages/Impute/GmIMg/test/testutils.jl:364
┌ Warning: locf! did not mutate input data of row table
└ @ Main ~/.julia/packages/Impute/GmIMg/test/testutils.jl:364
┌ Warning: nocb! did not mutate input data of row table
└ @ Main ~/.julia/packages/Impute/GmIMg/test/testutils.jl:364
[ Info: Before: Diff=missing, MAE=4526.643668160725, convergence=missing, normsq=missing, 0.0
[ Info: Iteration 1: Diff=1.2907604653089684e7, MAE=908.8783027147495, MSS=1.7551388179357244e12, convergence=51.239541218505444
[ Info: Iteration 2: Diff=2.9172212859213715e6, MAE=295.60401613386284, MSS=9.06767958279656e13, convergence=0.015297285505820527
[ Info: Iteration 3: Diff=832241.5022565697, MAE=202.82610502712222, MSS=1.090351149195373e14, convergence=0.00023431390863942243
[ Info: Iteration 4: Diff=443513.2428281751, MAE=156.20128825415085, MSS=1.1060995425841328e14, convergence=1.9306810264720202e-5
[ Info: Iteration 5: Diff=-172668.812187421, MAE=114.43990408903714, MSS=1.1075164656083958e14, convergence=1.1873496970971867e-5
[ Info: Iteration 6: Diff=-203976.61756383066, MAE=71.1662812498934, MSS=1.109859676675123e14, convergence=7.429828463455092e-6
[ Info: Iteration 7: Diff=-177439.55649906467, MAE=50.13094079000144, MSS=1.11155560986669e14, convergence=1.8327542133439e-6
[ Info: Iteration 8: Diff=-94945.4076333296, MAE=32.807011655203695, MSS=1.1120937314107628e14, convergence=6.86790026078329e-7
[ Info: Iteration 9: Diff=-3362.215314843026, MAE=20.022604952816646, MSS=1.1121102283092689e14, convergence=2.908355523303345e-7
[ Info: Iteration 10: Diff=569.2696724070629, MAE=10.765105290768975, MSS=1.1121277630741322e14, convergence=1.377641250067174e-7
[ Info: Iteration 11: Diff=1054.4982010662825, MAE=6.150941762829839, MSS=1.1121409780993022e14, convergence=5.440390483543712e-8
[ Info: Iteration 12: Diff=593.0101711225861, MAE=4.319014175901616, MSS=1.1121477236525625e14, convergence=2.180078449104593e-8
[ Info: Iteration 13: Diff=108.70105512581267, MAE=3.275328537804523, MSS=1.1121512727456397e14, convergence=7.691432481786831e-9
[ Info: Iteration 14: Diff=606.9199389116293, MAE=1.9624009007159013, MSS=1.112153677373105e14, convergence=4.938410062637243e-9
[ Info: Iteration 15: Diff=592.375445053509, MAE=1.6040361538511063, MSS=1.112155368011216e14, convergence=1.8548185751954108e-9
[ Info: Iteration 16: Diff=303.07706280369723, MAE=1.3414452565563575, MSS=1.1121574809973989e14, convergence=8.284019045299616e-10
[ Info: Iteration 17: Diff=110.24142699423216, MAE=1.2137901090190035, MSS=1.1121586245422875e14, convergence=4.4224962219063194e-10
[ Info: Iteration 18: Diff=71.18716680640655, MAE=1.0839437358683275, MSS=1.1121590879970434e14, convergence=2.653556374350706e-10
[ Info: Iteration 19: Diff=-108.69181220520993, MAE=0.9890491504662189, MSS=1.1121596333236331e14, convergence=1.4520836355554965e-10
[ Info: Iteration 20: Diff=-128.2928831207161, MAE=0.927629464369027, MSS=1.1121601186270522e14, convergence=9.679581089924548e-11
[ Info: Before: Diff=missing, MAE=2285.05607751531, convergence=missing, normsq=missing, 0.0
[ Info: Iteration 1: Diff=24687.300231636265, MAE=883.7525868418033, MSS=3.510456940532418e9, convergence=0.12235120308634644
[ Info: Iteration 2: Diff=-1151.3618556533468, MAE=5.53636131357494, MSS=3.7379790669565096e9, convergence=1.2222290130581598e-5
[ Info: Iteration 3: Diff=-122.82663088398385, MAE=3.1439435068482955, MSS=3.738140802593512e9, convergence=2.445879802926859e-7
[ Info: Iteration 4: Diff=-43.02304101914162, MAE=0.9835049174684851, MSS=3.738162384401297e9, convergence=1.124564963221878e-7
[ Info: Iteration 5: Diff=-0.22655536414311267, MAE=0.022380262422295773, MSS=3.7381651712056346e9, convergence=1.4476153075368795e-11
[ Info: Before: Diff=missing, MAE=50.37222952767304, convergence=missing, normsq=missing, 0.0
[ Info: Iteration 1: Diff=-18.141283451847755, MAE=1.0861514666730507, MSS=2.38061089003331e6, convergence=0.0013815640834055757
[ Info: Iteration 2: Diff=-15.930171173355959, MAE=1.0386026223166098, MSS=2.3857918508033245e6, convergence=7.639954140709555e-5
[ Info: Iteration 3: Diff=-16.31897028129292, MAE=1.0168230071808737, MSS=2.388385813978154e6, convergence=5.0483584455894134e-5
[ Info: Iteration 4: Diff=-6.713005465698004, MAE=1.0004806545721647, MSS=2.3904089113991964e6, convergence=4.577123255043642e-5
[ Info: Iteration 5: Diff=-12.48160440860967, MAE=0.97630370639308, MSS=2.391139170079246e6, convergence=5.209039717116732e-5
[ Info: Iteration 6: Diff=-13.468420374675901, MAE=0.9602089245541996, MSS=2.392572216159015e6, convergence=4.5337845225436993e-5
[ Info: Iteration 7: Diff=-1.2837857753057733, MAE=0.9383557634387791, MSS=2.3941005353996055e6, convergence=5.191044650716124e-5
[ Info: Iteration 8: Diff=14.965358379939516, MAE=0.9227790511417964, MSS=2.394455529240722e6, convergence=4.970552653387353e-5
[ Info: Iteration 9: Diff=-4.394332466836623, MAE=0.9032731443685889, MSS=2.3931383491850677e6, convergence=4.630332962143872e-5
[ Info: Iteration 10: Diff=7.917783892964515, MAE=0.8853581734914868, MSS=2.3938152128292834e6, convergence=4.6373256903333484e-5
[ Info: Iteration 11: Diff=-7.220554143827037, MAE=0.8705090861412843, MSS=2.393224340152601e6, convergence=4.2818714996688885e-5
[ Info: Iteration 12: Diff=-11.19087732907564, MAE=0.8529712429655925, MSS=2.3941356040946203e6, convergence=3.804459861418838e-5
[ Info: Iteration 13: Diff=8.801710906159741, MAE=0.8382045205407873, MSS=2.395466240116026e6, convergence=3.6883927189557674e-5
[ Info: Iteration 14: Diff=10.726993185440563, MAE=0.8225000180761227, MSS=2.394730148392009e6, convergence=3.506226973111312e-5
[ Info: Iteration 15: Diff=18.000898882905467, MAE=0.806764260756075, MSS=2.3938564649359514e6, convergence=3.855149229065752e-5
[ Info: Iteration 16: Diff=4.888965488137444, MAE=0.7932199544948237, MSS=2.392195194619421e6, convergence=3.42375294654122e-5
[ Info: Iteration 17: Diff=14.774506961683471, MAE=0.7756065444362467, MSS=2.3918686553766406e6, convergence=3.2140180729263004e-5
[ Info: Iteration 18: Diff=21.176238962138747, MAE=0.7583333308564715, MSS=2.3905966038273703e6, convergence=3.3339864915725555e-5
[ Info: Iteration 19: Diff=16.498683962620888, MAE=0.7437194650386141, MSS=2.388705966826891e6, convergence=3.221844113174932e-5
[ Info: Iteration 20: Diff=5.784137077283333, MAE=0.7301972368547298, MSS=2.3872981334580476e6, convergence=2.8846776779531185e-5
[ Info: Iteration 21: Diff=-0.3762556595665387, MAE=0.7172169663662834, MSS=2.386983976858324e6, convergence=2.8572252399443597e-5
[ Info: Iteration 22: Diff=-5.077841974041533, MAE=0.7035597645761775, MSS=2.3872552720387336e6, convergence=2.788754719500537e-5
[ Info: Iteration 23: Diff=1.1424021238874857, MAE=0.6888248552306199, MSS=2.3879444284678977e6, convergence=2.6115628112638747e-5
[ Info: Iteration 24: Diff=11.606408142151004, MAE=0.6759844119469973, MSS=2.3880264713292327e6, convergence=2.5007257821956526e-5
[ Info: Iteration 25: Diff=8.227447213282737, MAE=0.6611465260130598, MSS=2.387096060460415e6, convergence=2.7509517727061157e-5
[ Info: Iteration 26: Diff=4.794065852894931, MAE=0.6466223672306292, MSS=2.3864763656455805e6, convergence=2.7254923977269486e-5
[ Info: Iteration 27: Diff=3.1689380975068673, MAE=0.6302148405206122, MSS=2.386255512092958e6, convergence=2.6327544226634702e-5
[ Info: Iteration 28: Diff=8.652802757984645, MAE=0.6158221978278243, MSS=2.3862091403672765e6, convergence=2.5493428322512083e-5
[ Info: Iteration 29: Diff=14.45750504835216, MAE=0.6025837888832992, MSS=2.3856026539659007e6, convergence=2.519875536481929e-5
[ Info: Iteration 30: Diff=4.024049054743948, MAE=0.5893323551414581, MSS=2.384449970103481e6, convergence=2.238410107675308e-5
[ Info: Iteration 31: Diff=11.305894311490569, MAE=0.5763422634364429, MSS=2.384367506234277e6, convergence=2.0106809664809157e-5
[ Info: Iteration 32: Diff=4.253089216414956, MAE=0.5617124598229127, MSS=2.383509129103934e6, convergence=2.2431635589372938e-5
[ Info: Iteration 33: Diff=5.28157248151836, MAE=0.5472261401426857, MSS=2.3834281864172188e6, convergence=2.161284599386489e-5
[ Info: Iteration 34: Diff=8.891307344133764, MAE=0.5333312644691964, MSS=2.3832683909442546e6, convergence=2.2801991440879607e-5
[ Info: Iteration 35: Diff=0.02941219929797967, MAE=0.5191985093572496, MSS=2.382775810635028e6, convergence=2.2797200332394406e-5
[ Info: Iteration 36: Diff=5.978544417855041, MAE=0.5044681301090205, MSS=2.3832093964092466e6, convergence=2.2142937804593014e-5
[ Info: Iteration 37: Diff=7.3900808390715085, MAE=0.4874426284557348, MSS=2.382972624786164e6, convergence=2.4278690906724427e-5
[ Info: Iteration 38: Diff=2.895916508672123, MAE=0.47085171288653044, MSS=2.382627524077063e6, convergence=2.1796047935657884e-5
[ Info: Iteration 39: Diff=2.80844207177811, MAE=0.4584704132206911, MSS=2.382712603209952e6, convergence=1.9083287376553195e-5
[ Info: Iteration 40: Diff=2.4528751755901936, MAE=0.44430079722877697, MSS=2.382845056114501e6, convergence=2.008655909491098e-5
[ Info: Iteration 41: Diff=3.3474665212029606, MAE=0.42995772558601375, MSS=2.38307348702519e6, convergence=1.9849621409938218e-5
[ Info: Iteration 42: Diff=-3.106004723433223, MAE=0.4168110538411304, MSS=2.38318250719499e6, convergence=1.9717506302015508e-5
[ Info: Iteration 43: Diff=-2.4234847120401355, MAE=0.4010901755981415, MSS=2.383982199847491e6, convergence=1.7286386187616334e-5
[ Info: Iteration 44: Diff=-8.048266931410197, MAE=0.3888399770891512, MSS=2.3847253609076357e6, convergence=1.714796937961384e-5
[ Info: Iteration 45: Diff=-4.856522576346812, MAE=0.3756493649540825, MSS=2.3860373667099364e6, convergence=1.719585056661744e-5
[ Info: Iteration 46: Diff=-1.337734413273381, MAE=0.36063259012492704, MSS=2.3870352859302997e6, convergence=1.585796927889447e-5
[ Info: Iteration 47: Diff=-7.955127882743575, MAE=0.3463390654994538, MSS=2.387689662478031e6, convergence=1.482729133913424e-5
[ Info: Iteration 48: Diff=-10.040512348101707, MAE=0.33322285861989, MSS=2.389019687338433e6, convergence=1.4212228922633452e-5
[ Info: Iteration 49: Diff=-4.333980123483933, MAE=0.32147454757425065, MSS=2.390523193398995e6, convergence=1.3075145746329266e-5
[ Info: Iteration 50: Diff=1.2054234338362377, MAE=0.30813634035588017, MSS=2.391474822322277e6, convergence=1.260742185806508e-5
[ Info: Iteration 51: Diff=1.3406290632903577, MAE=0.2942343075400295, MSS=2.391898942700342e6, convergence=1.2398278869394583e-5
[ Info: Iteration 52: Diff=3.6889049085921144, MAE=0.2800283106370014, MSS=2.392296966776316e6, convergence=1.1645984534729487e-5
[ Info: Iteration 53: Diff=5.828287129454459, MAE=0.2670246687687506, MSS=2.3924683153513568e6, convergence=1.063044810823058e-5
[ Info: Iteration 54: Diff=6.371826399778161, MAE=0.2534463323368912, MSS=2.3923707709678705e6, convergence=9.672497315301738e-6
[ Info: Iteration 55: Diff=7.9856418410432575, MAE=0.2399341200878274, MSS=2.39218603026773e6, convergence=8.909524234442191e-6
[ Info: Iteration 56: Diff=7.210125470224138, MAE=0.2273842063699516, MSS=2.3918094496944114e6, convergence=7.904001522486506e-6
[ Info: Iteration 57: Diff=6.874927594174608, MAE=0.21456571299667343, MSS=2.3914871378311417e6, convergence=7.506558262517472e-6
[ Info: Iteration 58: Diff=5.503294603086832, MAE=0.2023315748704074, MSS=2.3911946964212283e6, convergence=6.7885201585861705e-6
[ Info: Iteration 59: Diff=5.86697843370305, MAE=0.19008096883242157, MSS=2.3910032440435854e6, convergence=6.250900380619703e-6
[ Info: Iteration 60: Diff=9.508026941078, MAE=0.17822002945084076, MSS=2.390761593447944e6, convergence=5.532416005000052e-6
[ Info: Iteration 61: Diff=7.853547814711213, MAE=0.16658977130928992, MSS=2.3901084389059343e6, convergence=4.922191189086533e-6
[ Info: Iteration 62: Diff=5.5977451644012, MAE=0.1553152979191459, MSS=2.3896026739880946e6, convergence=4.433177820059265e-6
[ Info: Iteration 63: Diff=2.9527605378855917, MAE=0.1449689362703218, MSS=2.38929316792301e6, convergence=4.190113917133142e-6
[ Info: Iteration 64: Diff=1.8924353090063448, MAE=0.13486257494088333, MSS=2.3892375981786796e6, convergence=3.64072488698816e-6
[ Info: Iteration 65: Diff=3.1561314882480502, MAE=0.1246214495779651, MSS=2.389275024511183e6, convergence=3.2617523151162788e-6
[ Info: Iteration 66: Diff=2.689491202878937, MAE=0.1148335309168711, MSS=2.3891687585844724e6, convergence=2.8430300649710614e-6
[ Info: Iteration 67: Diff=2.1249650148248485, MAE=0.1059597921780579, MSS=2.3890800084110796e6, convergence=2.584668834434581e-6
[ Info: Iteration 68: Diff=2.1029941682385918, MAE=0.09788336482189568, MSS=2.389042614070288e6, convergence=2.1082911169342246e-6
[ Info: Iteration 69: Diff=0.5774551215363104, MAE=0.09026114141743526, MSS=2.3889875515167518e6, convergence=1.8173992011368953e-6
[ Info: Iteration 70: Diff=0.9668752828804372, MAE=0.08277274562829848, MSS=2.389057441407872e6, convergence=1.6236464892886135e-6
[ Info: Iteration 71: Diff=1.3800912972183212, MAE=0.07606414080583303, MSS=2.3890625663880487e6, convergence=1.4331330370703086e-6
[ Info: Iteration 72: Diff=1.5699822840677378, MAE=0.06925047565695122, MSS=2.389020783722378e6, convergence=1.3076711602060969e-6
[ Info: Iteration 73: Diff=1.5782651808482164, MAE=0.06297481880027177, MSS=2.3889552778456183e6, convergence=1.0961936932603717e-6
[ Info: Iteration 74: Diff=1.555336126887731, MAE=0.05688384823411549, MSS=2.3888763971400256e6, convergence=9.59581518224501e-7
[ Info: Iteration 75: Diff=1.8613724305959316, MAE=0.05123508334266589, MSS=2.388788101074717e6, convergence=7.992287114051904e-7
[ Info: Iteration 76: Diff=1.6753015051607, MAE=0.045819666078497426, MSS=2.388662759802304e6, convergence=6.63440282976223e-7
[ Info: Iteration 77: Diff=1.4622017834634065, MAE=0.04085546871919452, MSS=2.388545700016155e6, convergence=5.562447514759941e-7
[ Info: Iteration 78: Diff=1.2868539996683914, MAE=0.036260571444300685, MSS=2.3884444323051674e6, convergence=4.59416990483905e-7
[ Info: Iteration 79: Diff=0.36870191944609587, MAE=0.03218524836469538, MSS=2.3883512631754773e6, convergence=4.002359707420402e-7
[ Info: Iteration 80: Diff=0.5973737598161541, MAE=0.02843592650896628, MSS=2.3883462614228176e6, convergence=3.284294171055358e-7
[ Info: Iteration 81: Diff=0.622581887403598, MAE=0.02449190235081682, MSS=2.388312692563542e6, convergence=2.541163670101215e-7
[ Info: Iteration 82: Diff=0.6421612200523157, MAE=0.021113563502303794, MSS=2.3882725675530485e6, convergence=1.970082585252263e-7
[ Info: Iteration 83: Diff=0.5145595048615981, MAE=0.01804541162612694, MSS=2.3882244914869936e6, convergence=1.510855675546467e-7
[ Info: Iteration 84: Diff=0.7039779998297213, MAE=0.015500477925857457, MSS=2.3881850650372864e6, convergence=1.1943257975966834e-7
[ Info: Iteration 85: Diff=0.7234178573870231, MAE=0.012976288143341237, MSS=2.388126244345144e6, convergence=9.392975063065961e-8
[ Info: Iteration 86: Diff=0.8187162152135166, MAE=0.0108055637716572, MSS=2.388059686926764e6, convergence=6.69013928225854e-8
[ Info: Iteration 87: Diff=0.6940747231437747, MAE=0.008779942362354654, MSS=2.3879842905210117e6, convergence=4.7034737463842676e-8
[ Info: Iteration 88: Diff=0.5224794703943516, MAE=0.006917839902818734, MSS=2.3879211922551445e6, convergence=3.058433035756638e-8
[ Info: Iteration 89: Diff=0.316276901889637, MAE=0.005475829874759238, MSS=2.3878748412110964e6, convergence=1.9727303686656383e-8
[ Info: Iteration 90: Diff=0.22448043220286706, MAE=0.00435911355231408, MSS=2.3878474985777433e6, convergence=1.2660944860215783e-8
[ Info: Iteration 91: Diff=0.2180980446331091, MAE=0.0033715759669347024, MSS=2.3878286562406356e6, convergence=7.86602788020004e-9
[ Info: Iteration 92: Diff=0.10708332035581591, MAE=0.0024738467738013034, MSS=2.3878103462433573e6, convergence=4.4801180531346065e-9
[ Info: Iteration 93: Diff=0.0968907737229685, MAE=0.0018323930029693156, MSS=2.3878026936513633e6, convergence=2.361190983872717e-9
[ Info: Iteration 94: Diff=0.13481660934052186, MAE=0.0012707956093970043, MSS=2.387794301451258e6, convergence=1.271749728333234e-9
[ Info: Iteration 95: Diff=0.0884225027882124, MAE=0.000888256892449347, MSS=2.3877807015202455e6, convergence=6.034659851370087e-10
[ Info: Iteration 96: Diff=0.06489411868212613, MAE=0.0005232571103113407, MSS=2.3877722174460986e6, convergence=2.613970532217207e-10
[ Info: Iteration 97: Diff=0.02625531542498294, MAE=0.0003017925767643975, MSS=2.3877656177322315e6, convergence=9.877328036250464e-11
Test Summary: | Pass Fail Broken Total
Impute | 398 1 9 408
Equality | 7 7
Drop | 33 9 42
Interpolate | 6 6
Fill | 8 8
LOCF | 3 3
NOCB | 3 3
SRS | 2 1 3
Not enough data | 2 2
Chain | 16 16
Alternate missing functions | 2 2
Contexts | 5 5
Utils | 8 8
KNN | 12 12
deprecated | 27 27
DropObs | 45 45
DropVars | 32 32
Interpolate | 46 46
Fill | 46 46
LOCF | 46 46
NOCB | 46 46
SVD | 3 3
ERROR: LoadError: Some tests did not pass: 398 passed, 1 failed, 0 errored, 9 broken.
in expression starting at /home/pkgeval/.julia/packages/Impute/GmIMg/test/runtests.jl:54
ERROR: Package Impute errored during testing
Stacktrace:
[1] pkgerror(::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/Types.jl:52
[2] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/Operations.jl:1561
[3] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:327
[4] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:314
[5] #test#61 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:67 [inlined]
[6] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:67 [inlined]
[7] #test#60 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:66 [inlined]
[8] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:66 [inlined]
[9] test(::String; kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:65
[10] test(::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:65
[11] top-level scope at none:16