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1.6.0-DEV-cbd854b0f4.log
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Julia Version 1.6.0-DEV.185
Commit cbd854b0f4 (2020-06-06 13:20 UTC)
Platform Info:
OS: Linux (x86_64-pc-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-9.0.1 (ORCJIT, skylake)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
Installed Arpack_jll ─────────────────── v3.5.0+3
Installed Compat ─────────────────────── v3.10.0
Installed RecipesBase ────────────────── v1.0.1
Installed OrderedCollections ─────────── v1.2.0
Installed StatsBase ──────────────────── v0.33.0
Installed OnlineStats ────────────────── v1.5.3
Installed DataFrames ─────────────────── v0.20.2
Installed Pathogen ───────────────────── v0.4.12
Installed DataValueInterfaces ────────── v1.0.0
Installed SortingAlgorithms ──────────── v0.3.1
Installed PDMats ─────────────────────── v0.9.12
Installed TableTraits ────────────────── v1.0.0
Installed QuadGK ─────────────────────── v2.3.1
Installed InvertedIndices ────────────── v1.0.0
Installed Reexport ───────────────────── v0.2.0
Installed CategoricalArrays ──────────── v0.7.7
Installed PooledArrays ───────────────── v0.5.3
Installed Rmath_jll ──────────────────── v0.2.2+0
Installed Rmath ──────────────────────── v0.6.1
Installed DataStructures ─────────────── v0.17.17
Installed OpenBLAS_jll ───────────────── v0.3.9+4
Installed ProgressMeter ──────────────── v1.3.0
Installed JSON ───────────────────────── v0.21.0
Installed Tables ─────────────────────── v1.0.4
Installed FillArrays ─────────────────── v0.8.10
Installed Distributions ──────────────── v0.23.4
Installed SweepOperator ──────────────── v0.3.0
Installed Parsers ────────────────────── v1.0.5
Installed Missings ───────────────────── v0.4.3
Installed CompilerSupportLibraries_jll ─ v0.3.3+0
Installed Arpack ─────────────────────── v0.4.0
Installed DataAPI ────────────────────── v1.3.0
Installed OnlineStatsBase ────────────── v1.4.1
Installed OpenSpecFun_jll ────────────── v0.5.3+3
Installed AbstractTrees ──────────────── v0.3.3
Installed IteratorInterfaceExtensions ── v1.0.0
Installed StatsFuns ──────────────────── v0.9.5
Installed SpecialFunctions ───────────── v0.10.3
Updating `~/.julia/environments/v1.6/Project.toml`
[c8189ad9] + Pathogen v0.4.12
Updating `~/.julia/environments/v1.6/Manifest.toml`
[1520ce14] + AbstractTrees v0.3.3
[7d9fca2a] + Arpack v0.4.0
[68821587] + Arpack_jll v3.5.0+3
[324d7699] + CategoricalArrays v0.7.7
[34da2185] + Compat v3.10.0
[e66e0078] + CompilerSupportLibraries_jll v0.3.3+0
[9a962f9c] + DataAPI v1.3.0
[a93c6f00] + DataFrames v0.20.2
[864edb3b] + DataStructures v0.17.17
[e2d170a0] + DataValueInterfaces v1.0.0
[31c24e10] + Distributions v0.23.4
[1a297f60] + FillArrays v0.8.10
[41ab1584] + InvertedIndices v1.0.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[682c06a0] + JSON v0.21.0
[e1d29d7a] + Missings v0.4.3
[a15396b6] + OnlineStats v1.5.3
[925886fa] + OnlineStatsBase v1.4.1
[4536629a] + OpenBLAS_jll v0.3.9+4
[efe28fd5] + OpenSpecFun_jll v0.5.3+3
[bac558e1] + OrderedCollections v1.2.0
[90014a1f] + PDMats v0.9.12
[69de0a69] + Parsers v1.0.5
[c8189ad9] + Pathogen v0.4.12
[2dfb63ee] + PooledArrays v0.5.3
[92933f4c] + ProgressMeter v1.3.0
[1fd47b50] + QuadGK v2.3.1
[3cdcf5f2] + RecipesBase v1.0.1
[189a3867] + Reexport v0.2.0
[79098fc4] + Rmath v0.6.1
[f50d1b31] + Rmath_jll v0.2.2+0
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.10.3
[2913bbd2] + StatsBase v0.33.0
[4c63d2b9] + StatsFuns v0.9.5
[7522ee7d] + SweepOperator v0.3.0
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v1.0.4
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[4607b0f0] + SuiteSparse
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Testing Pathogen
Status `/tmp/jl_7mubNj/Project.toml`
[a93c6f00] DataFrames v0.20.2
[b4f34e82] Distances v0.9.0
[31c24e10] Distributions v0.23.4
[a15396b6] OnlineStats v1.5.3
[c8189ad9] Pathogen v0.4.12
[92933f4c] ProgressMeter v1.3.0
[3cdcf5f2] RecipesBase v1.0.1
[2913bbd2] StatsBase v0.33.0
[8ba89e20] Distributed
[37e2e46d] LinearAlgebra
[56ddb016] Logging
[9a3f8284] Random
[10745b16] Statistics
[8dfed614] Test
Status `/tmp/jl_7mubNj/Manifest.toml`
[1520ce14] AbstractTrees v0.3.3
[7d9fca2a] Arpack v0.4.0
[68821587] Arpack_jll v3.5.0+3
[324d7699] CategoricalArrays v0.7.7
[34da2185] Compat v3.10.0
[e66e0078] CompilerSupportLibraries_jll v0.3.3+0
[9a962f9c] DataAPI v1.3.0
[a93c6f00] DataFrames v0.20.2
[864edb3b] DataStructures v0.17.17
[e2d170a0] DataValueInterfaces v1.0.0
[b4f34e82] Distances v0.9.0
[31c24e10] Distributions v0.23.4
[1a297f60] FillArrays v0.8.10
[41ab1584] InvertedIndices v1.0.0
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.0
[e1d29d7a] Missings v0.4.3
[a15396b6] OnlineStats v1.5.3
[925886fa] OnlineStatsBase v1.4.1
[4536629a] OpenBLAS_jll v0.3.9+4
[efe28fd5] OpenSpecFun_jll v0.5.3+3
[bac558e1] OrderedCollections v1.2.0
[90014a1f] PDMats v0.9.12
[69de0a69] Parsers v1.0.5
[c8189ad9] Pathogen v0.4.12
[2dfb63ee] PooledArrays v0.5.3
[92933f4c] ProgressMeter v1.3.0
[1fd47b50] QuadGK v2.3.1
[3cdcf5f2] RecipesBase v1.0.1
[189a3867] Reexport v0.2.0
[79098fc4] Rmath v0.6.1
[f50d1b31] Rmath_jll v0.2.2+0
[a2af1166] SortingAlgorithms v0.3.1
[276daf66] SpecialFunctions v0.10.3
[2913bbd2] StatsBase v0.33.0
[4c63d2b9] StatsFuns v0.9.5
[7522ee7d] SweepOperator v0.3.0
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v1.0.4
[2a0f44e3] Base64
[ade2ca70] Dates
[8bb1440f] DelimitedFiles
[8ba89e20] Distributed
[9fa8497b] Future
[b77e0a4c] InteractiveUtils
[76f85450] LibGit2
[8f399da3] Libdl
[37e2e46d] LinearAlgebra
[56ddb016] Logging
[d6f4376e] Markdown
[a63ad114] Mmap
[44cfe95a] Pkg
[de0858da] Printf
[3fa0cd96] REPL
[9a3f8284] Random
[ea8e919c] SHA
[9e88b42a] Serialization
[1a1011a3] SharedArrays
[6462fe0b] Sockets
[2f01184e] SparseArrays
[10745b16] Statistics
[4607b0f0] SuiteSparse
[8dfed614] Test
[cf7118a7] UUIDs
[4ec0a83e] Unicode
Initialization progress 0%|▏ | ETA: 2:55:42[KInitialization progress 49%|█████████████▊ | ETA: 0:00:37[KInitialization progress 66%|██████████████████▌ | ETA: 0:00:19[KInitialization progress 83%|███████████████████████▎ | ETA: 0:00:07[KInitialization progress 87%|████████████████████████▎ | ETA: 0:00:06[KInitialization progress 94%|██████████████████████████▍ | ETA: 0:00:02[KInitialization progress 97%|███████████████████████████▎| ETA: 0:00:01[KInitialization progress100%|████████████████████████████| Time: 0:00:36[K
MCMC progress 0%|▏ | ETA: 1:55:11[KMCMC progress 8%|██▉ | ETA: 0:04:40[KMCMC progress 13%|█████▏ | ETA: 0:02:32[KMCMC progress 16%|██████▎ | ETA: 0:02:00[KMCMC progress 23%|████████▊ | ETA: 0:01:19[KMCMC progress 26%|██████████ | ETA: 0:01:06[KMCMC progress 29%|███████████▏ | ETA: 0:00:58[KMCMC progress 36%|█████████████▊ | ETA: 0:00:43[KMCMC progress 44%|████████████████▉ | ETA: 0:00:31[KMCMC progress 49%|██████████████████▊ | ETA: 0:00:25[KMCMC progress 58%|██████████████████████ | ETA: 0:00:18[KMCMC progress 66%|█████████████████████████▎ | ETA: 0:00:13[KMCMC progress 73%|███████████████████████████▊ | ETA: 0:00:09[KMCMC progress 80%|██████████████████████████████▍ | ETA: 0:00:06[KMCMC progress 87%|█████████████████████████████████ | ETA: 0:00:04[KMCMC progress 87%|█████████████████████████████████▏ | ETA: 0:00:04[KMCMC progress 93%|███████████████████████████████████▎ | ETA: 0:00:02[KMCMC progress 94%|███████████████████████████████████▋ | ETA: 0:00:02[KMCMC progress 97%|█████████████████████████████████████ | ETA: 0:00:01[KMCMC progress100%|██████████████████████████████████████| Time: 0:00:29[K
Initialization progress 2%|▌ | ETA: 0:04:09[KInitialization progress100%|████████████████████████████| Time: 0:00:05[K
MCMC progress 1%|▍ | ETA: 0:02:42[KMCMC progress 30%|███████████▍ | ETA: 0:00:04[KMCMC progress 65%|████████████████████████▊ | ETA: 0:00:01[KMCMC progress 96%|████████████████████████████████████▌ | ETA: 0:00:00[KMCMC progress100%|██████████████████████████████████████| Time: 0:00:01[K
Test Summary: | Pass Total
SEIR Model | 82 82
Initialization progress 0%|▏ | ETA: 0:50:39[KInitialization progress 19%|█████▍ | ETA: 0:00:44[KInitialization progress 40%|███████████▎ | ETA: 0:00:15[KInitialization progress 52%|██████████████▌ | ETA: 0:00:10[KInitialization progress 74%|████████████████████▉ | ETA: 0:00:04[KInitialization progress 89%|████████████████████████▉ | ETA: 0:00:01[KInitialization progress 97%|███████████████████████████▏| ETA: 0:00:00[KInitialization progress 97%|███████████████████████████▏| ETA: 0:00:00[KInitialization progress100%|████████████████████████████| Time: 0:00:11[K
MCMC progress 0%|▏ | ETA: 0:47:28[KMCMC progress 9%|███▍ | ETA: 0:01:37[KMCMC progress 17%|██████▋ | ETA: 0:00:46[KMCMC progress 26%|█████████▉ | ETA: 0:00:28[KMCMC progress 34%|█████████████ | ETA: 0:00:19[KMCMC progress 44%|████████████████▋ | ETA: 0:00:13[KMCMC progress 50%|███████████████████ | ETA: 0:00:10[KMCMC progress 53%|████████████████████▎ | ETA: 0:00:09[KMCMC progress 61%|███████████████████████▏ | ETA: 0:00:07[KMCMC progress 70%|██████████████████████████▋ | ETA: 0:00:05[KMCMC progress 79%|█████████████████████████████▉ | ETA: 0:00:03[KMCMC progress 86%|████████████████████████████████▊ | ETA: 0:00:02[KMCMC progress 93%|███████████████████████████████████▌ | ETA: 0:00:01[KMCMC progress 97%|█████████████████████████████████████ | ETA: 0:00:00[KMCMC progress100%|██████████████████████████████████████| Time: 0:00:12[K
Initialization progress 4%|█▏ | ETA: 0:00:46[KInitialization progress100%|████████████████████████████| Time: 0:00:01[K
MCMC progress 1%|▍ | ETA: 0:00:14[KMCMC progress 34%|████████████▉ | ETA: 0:00:00[KMCMC progress 84%|███████████████████████████████▉ | ETA: 0:00:00[KMCMC progress100%|██████████████████████████████████████| Time: 0:00:00[K
Test Summary: | Pass Total
SEI Model | 164 164
Initialization progress 0%|▏ | ETA: 0:52:11[KInitialization progress 27%|███████▋ | ETA: 0:00:28[KInitialization progress 47%|█████████████▎ | ETA: 0:00:12[KInitialization progress 63%|█████████████████▊ | ETA: 0:00:06[KInitialization progress 82%|███████████████████████ | ETA: 0:00:02[KInitialization progress 90%|█████████████████████████▎ | ETA: 0:00:01[KInitialization progress 97%|███████████████████████████▏| ETA: 0:00:00[KInitialization progress100%|████████████████████████████| Time: 0:00:11[K
MCMC progress 0%|▏ | ETA: 0:48:53[KMCMC progress 8%|███ | ETA: 0:01:54[KMCMC progress 17%|██████▍ | ETA: 0:00:50[KMCMC progress 25%|█████████▋ | ETA: 0:00:30[KMCMC progress 34%|████████████▉ | ETA: 0:00:20[KMCMC progress 43%|████████████████▌ | ETA: 0:00:14[KMCMC progress 51%|███████████████████▎ | ETA: 0:00:10[KMCMC progress 55%|████████████████████▊ | ETA: 0:00:09[KMCMC progress 56%|█████████████████████▍ | ETA: 0:00:08[KMCMC progress 66%|█████████████████████████▏ | ETA: 0:00:06[KMCMC progress 76%|█████████████████████████████ | ETA: 0:00:03[KMCMC progress 82%|███████████████████████████████▏ | ETA: 0:00:02[KMCMC progress 88%|█████████████████████████████████▍ | ETA: 0:00:02[KMCMC progress 94%|███████████████████████████████████▊ | ETA: 0:00:01[KMCMC progress 97%|█████████████████████████████████████ | ETA: 0:00:00[KMCMC progress100%|██████████████████████████████████████| Time: 0:00:11[K
Initialization progress 4%|█▏ | ETA: 0:00:46[KInitialization progress100%|████████████████████████████| Time: 0:00:01[K
MCMC progress 1%|▍ | ETA: 0:00:18[KMCMC progress 31%|███████████▊ | ETA: 0:00:01[KMCMC progress 65%|████████████████████████▊ | ETA: 0:00:00[KMCMC progress100%|██████████████████████████████████████| Time: 0:00:00[K
Test Summary: | Pass Total
SIR Model | 173 173
Initialization progress 0%|▏ | ETA: 0:52:31[KInitialization progress 22%|██████▏ | ETA: 0:00:38[KInitialization progress 43%|████████████▏ | ETA: 0:00:14[KInitialization progress 67%|██████████████████▋ | ETA: 0:00:05[KInitialization progress 89%|█████████████████████████ | ETA: 0:00:01[KInitialization progress 96%|███████████████████████████ | ETA: 0:00:00[KInitialization progress 97%|███████████████████████████▎| ETA: 0:00:00[KInitialization progress100%|████████████████████████████| Time: 0:00:11[K
MCMC progress 0%|▏ | ETA: 0:44:42[KMCMC progress 10%|███▋ | ETA: 0:01:25[KMCMC progress 18%|███████ | ETA: 0:00:41[KMCMC progress 25%|█████████▋ | ETA: 0:00:27[KMCMC progress 33%|████████████▋ | ETA: 0:00:19[KMCMC progress 39%|███████████████ | ETA: 0:00:15[KMCMC progress 44%|████████████████▊ | ETA: 0:00:12[KMCMC progress 55%|████████████████████▉ | ETA: 0:00:08[KMCMC progress 66%|█████████████████████████▎ | ETA: 0:00:05[KMCMC progress 79%|█████████████████████████████▉ | ETA: 0:00:03[KMCMC progress 91%|██████████████████████████████████▋ | ETA: 0:00:01[KMCMC progress 94%|███████████████████████████████████▋ | ETA: 0:00:01[KMCMC progress 97%|████████████████████████████████████▊ | ETA: 0:00:00[KMCMC progress 97%|████████████████████████████████████▉ | ETA: 0:00:00[KMCMC progress100%|██████████████████████████████████████| Time: 0:00:10[K
Initialization progress 4%|█▏ | ETA: 0:00:53[KInitialization progress100%|████████████████████████████| Time: 0:00:02[K
MCMC progress 1%|▍ | ETA: 0:00:24[KMCMC progress 67%|█████████████████████████▌ | ETA: 0:00:00[KMCMC progress100%|██████████████████████████████████████| Time: 0:00:00[K
Test Summary: | Pass Total
SI Model | 106 106
Testing Pathogen tests passed