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1.5.1-pre-0d71d8cd8b.log
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Julia Version 1.5.1-pre.28
Commit 0d71d8cd8b (2020-08-14 20:35 UTC)
Platform Info:
OS: Linux (x86_64-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
Installed Libiconv_jll ─────────── v1.16.0+5
Installed FFTW_jll ─────────────── v3.3.9+5
Installed CollisionDetection ───── v0.1.2
Installed SpecialFunctions ─────── v0.8.0
Installed WiltonInts84 ─────────── v0.2.1
Installed BinaryProvider ───────── v0.5.10
Installed StaticArrays ─────────── v0.12.4
Installed BEAST ────────────────── v1.2.0
Installed IntelOpenMP_jll ──────── v2018.0.3+0
Installed Zlib_jll ─────────────── v1.2.11+15
Installed Mocking ──────────────── v0.7.1
Installed Requires ─────────────── v1.0.1
Installed Reexport ─────────────── v0.2.0
Installed XML2_jll ─────────────── v2.9.10+1
Installed Polynomials ──────────── v0.8.0
Installed ArrayLayouts ─────────── v0.4.3
Installed FFTW ─────────────────── v1.2.2
Installed IterativeSolvers ─────── v0.8.4
Installed Compat ───────────────── v2.2.1
Installed FillArrays ───────────── v0.9.4
Installed ClusterTrees ─────────── v0.2.0
Installed BlockArrays ──────────── v0.12.12
Installed EzXML ────────────────── v1.1.0
Installed RecipesBase ──────────── v1.0.2
Installed CompScienceMeshes ────── v0.2.6
Installed URIParser ────────────── v0.4.1
Installed FastGaussQuadrature ──── v0.4.2
Installed AbstractFFTs ─────────── v0.5.0
Installed TimeZones ────────────── v1.3.2
Installed Intervals ────────────── v1.4.2
Installed MKL_jll ──────────────── v2020.2.254+0
Installed Combinatorics ────────── v0.7.0
Installed ExprTools ────────────── v0.1.1
Installed BinDeps ──────────────── v1.0.1
Installed SauterSchwabQuadrature ─ v2.1.0
Updating `~/.julia/environments/v1.5/Project.toml`
[bb4162c7] + BEAST v1.2.0
Updating `~/.julia/environments/v1.5/Manifest.toml`
[621f4979] + AbstractFFTs v0.5.0
[4c555306] + ArrayLayouts v0.4.3
[bb4162c7] + BEAST v1.2.0
[9e28174c] + BinDeps v1.0.1
[b99e7846] + BinaryProvider v0.5.10
[8e7c35d0] + BlockArrays v0.12.12
[5100927d] + ClusterTrees v0.2.0
[2b5bf9a6] + CollisionDetection v0.1.2
[861a8166] + Combinatorics v0.7.0
[3e66a162] + CompScienceMeshes v0.2.6
[34da2185] + Compat v2.2.1
[e2ba6199] + ExprTools v0.1.1
[8f5d6c58] + EzXML v1.1.0
[7a1cc6ca] + FFTW v1.2.2
[f5851436] + FFTW_jll v3.3.9+5
[442a2c76] + FastGaussQuadrature v0.4.2
[1a297f60] + FillArrays v0.9.4
[1d5cc7b8] + IntelOpenMP_jll v2018.0.3+0
[d8418881] + Intervals v1.4.2
[42fd0dbc] + IterativeSolvers v0.8.4
[94ce4f54] + Libiconv_jll v1.16.0+5
[856f044c] + MKL_jll v2020.2.254+0
[78c3b35d] + Mocking v0.7.1
[f27b6e38] + Polynomials v0.8.0
[3cdcf5f2] + RecipesBase v1.0.2
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v1.0.1
[535c7bfe] + SauterSchwabQuadrature v2.1.0
[276daf66] + SpecialFunctions v0.8.0
[90137ffa] + StaticArrays v0.12.4
[f269a46b] + TimeZones v1.3.2
[30578b45] + URIParser v0.4.1
[a3e2863e] + WiltonInts84 v0.2.1
[02c8fc9c] + XML2_jll v2.9.10+1
[83775a58] + Zlib_jll v1.2.11+15
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building SpecialFunctions → `~/.julia/packages/SpecialFunctions/ne2iw/deps/build.log`
Building FFTW ────────────→ `~/.julia/packages/FFTW/kcXL6/deps/build.log`
Building TimeZones ───────→ `~/.julia/packages/TimeZones/v0mfN/deps/build.log`
Testing BEAST
Status `/tmp/jl_w0kzXj/Project.toml`
[bb4162c7] BEAST v1.2.0
[8e7c35d0] BlockArrays v0.12.12
[2b5bf9a6] CollisionDetection v0.1.2
[861a8166] Combinatorics v0.7.0
[3e66a162] CompScienceMeshes v0.2.6
[34da2185] Compat v2.2.1
[7a1cc6ca] FFTW v1.2.2
[442a2c76] FastGaussQuadrature v0.4.2
[42fd0dbc] IterativeSolvers v0.8.4
[535c7bfe] SauterSchwabQuadrature v2.1.0
[276daf66] SpecialFunctions v0.8.0
[90137ffa] StaticArrays v0.12.4
[a3e2863e] WiltonInts84 v0.2.1
[8bb1440f] DelimitedFiles
[8ba89e20] Distributed
[37e2e46d] LinearAlgebra
[44cfe95a] Pkg
[1a1011a3] SharedArrays
[2f01184e] SparseArrays
[8dfed614] Test
Status `/tmp/jl_w0kzXj/Manifest.toml`
[621f4979] AbstractFFTs v0.5.0
[4c555306] ArrayLayouts v0.4.3
[bb4162c7] BEAST v1.2.0
[9e28174c] BinDeps v1.0.1
[b99e7846] BinaryProvider v0.5.10
[8e7c35d0] BlockArrays v0.12.12
[5100927d] ClusterTrees v0.2.0
[2b5bf9a6] CollisionDetection v0.1.2
[861a8166] Combinatorics v0.7.0
[3e66a162] CompScienceMeshes v0.2.6
[34da2185] Compat v2.2.1
[e2ba6199] ExprTools v0.1.1
[8f5d6c58] EzXML v1.1.0
[7a1cc6ca] FFTW v1.2.2
[f5851436] FFTW_jll v3.3.9+5
[442a2c76] FastGaussQuadrature v0.4.2
[1a297f60] FillArrays v0.9.4
[1d5cc7b8] IntelOpenMP_jll v2018.0.3+0
[d8418881] Intervals v1.4.2
[42fd0dbc] IterativeSolvers v0.8.4
[94ce4f54] Libiconv_jll v1.16.0+5
[856f044c] MKL_jll v2020.2.254+0
[78c3b35d] Mocking v0.7.1
[f27b6e38] Polynomials v0.8.0
[3cdcf5f2] RecipesBase v1.0.2
[189a3867] Reexport v0.2.0
[ae029012] Requires v1.0.1
[535c7bfe] SauterSchwabQuadrature v2.1.0
[276daf66] SpecialFunctions v0.8.0
[90137ffa] StaticArrays v0.12.4
[f269a46b] TimeZones v1.3.2
[30578b45] URIParser v0.4.1
[a3e2863e] WiltonInts84 v0.2.1
[02c8fc9c] XML2_jll v2.9.10+1
[83775a58] Zlib_jll v1.2.11+15
[2a0f44e3] Base64
[ade2ca70] Dates
[8bb1440f] DelimitedFiles
[8ba89e20] Distributed
[b77e0a4c] InteractiveUtils
[76f85450] LibGit2
[8f399da3] Libdl
[37e2e46d] LinearAlgebra
[56ddb016] Logging
[d6f4376e] Markdown
[a63ad114] Mmap
[44cfe95a] Pkg
[de0858da] Printf
[3fa0cd96] REPL
[9a3f8284] Random
[ea8e919c] SHA
[9e88b42a] Serialization
[1a1011a3] SharedArrays
[6462fe0b] Sockets
[2f01184e] SparseArrays
[10745b16] Statistics
[8dfed614] Test
[cf7118a7] UUIDs
[4ec0a83e] Unicode
9.088703 seconds (8.07 M allocations: 412.905 MiB, 2.88% gc time)
7.933170 seconds (7.37 M allocations: 363.036 MiB, 7.41% gc time)
0.641053 seconds (481.77 k allocations: 25.393 MiB, 4.60% gc time)
length(fcs) = 48
length(sorted_fcs) = 48
length(fcs) = 192
length(sorted_fcs) = 192
dots out of 10: .....
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┌ Warning: CompScienceMeshes being patched...
└ @ Main.PkgTests ~/.julia/packages/BEAST/rHcfL/test/test_subd_basis.jl:6
┌ Warning: Assignment to `c` in soft scope is ambiguous because a global variable by the same name exists: `c` will be treated as a new local. Disambiguate by using `local c` to suppress this warning or `global c` to assign to the existing global variable.
└ @ ~/.julia/packages/BEAST/rHcfL/test/test_dvg.jl:17
length(fcs) = 192
length(sorted_fcs) = 192
length(fcs) = 1896
length(sorted_fcs) = 1896
length(fcs) = 1896
length(sorted_fcs) = 1896
RT space is div-conforming
BC space is div-conforming
length(fcs) = 300
length(sorted_fcs) = 300
length(fcs) = 300
length(sorted_fcs) = 300
length(fcs) = 1896
length(sorted_fcs) = 1896
┌ Warning: Assignment to `c` in soft scope is ambiguous because a global variable by the same name exists: `c` will be treated as a new local. Disambiguate by using `local c` to suppress this warning or `global c` to assign to the existing global variable.
└ @ ~/.julia/packages/BEAST/rHcfL/test/test_trace.jl:23
┌ Warning: Assignment to `Q` in soft scope is ambiguous because a global variable by the same name exists: `Q` will be treated as a new local. Disambiguate by using `local Q` to suppress this warning or `global Q` to assign to the existing global variable.
└ @ ~/.julia/packages/BEAST/rHcfL/test/test_ttrace.jl:65
cartesian(p_smalltet) = [0.3125, 0.3125, 0.3125]
cartesian(p_tet) = [0.3125, 0.3125, 0.3125]
┌ Warning: Assignment to `x` in soft scope is ambiguous because a global variable by the same name exists: `x` will be treated as a new local. Disambiguate by using `local x` to suppress this warning or `global x` to assign to the existing global variable.
└ @ ~/.julia/packages/BEAST/rHcfL/test/test_ndlcd_restrict.jl:31
┌ Warning: Assignment to `y` in soft scope is ambiguous because a global variable by the same name exists: `y` will be treated as a new local. Disambiguate by using `local y` to suppress this warning or `global y` to assign to the existing global variable.
└ @ ~/.julia/packages/BEAST/rHcfL/test/test_ndlcd_restrict.jl:32
x = [-0.3125, 0.3125, 0.0]
y = [-0.3125, 0.3125, 0.0]
x = [-0.3125, 0.0, 0.3125]
y = [-0.3125, 0.0, 0.3125]
x = [-0.375, -0.3125, -0.3125]
y = [-0.375, -0.3125, -0.3125]
x = [0.0, -0.3125, 0.3125]
y = [0.0, -0.3125, 0.3125]
x = [-0.3125, -0.375, -0.3125]
y = [-0.3125, -0.375, -0.3125]
x = [-0.3125, -0.3125, -0.375]
y = [-0.3125, -0.3125, -0.375]
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length(fcs) = 1896
length(sorted_fcs) = 1896
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dots out of 10: ..........
dots out of 10: ..........
Mesh file defined 3 physical entities:
entity_name = "\"Gamma01\""
Target entity "Gamma01" is 1 out of 3.
[ Info: sorting...
Mesh file defined 3 physical entities:
entity_name = "\"Gamma01\""
entity_name = "\"Gamma02\""
Target entity "Gamma02" is 2 out of 3.
[ Info: sorting...
Mesh file defined 3 physical entities:
entity_name = "\"Gamma01\""
entity_name = "\"Gamma02\""
entity_name = "\"Gamma12\""
Target entity "Gamma12" is 3 out of 3.
[ Info: sorting...
[ Info: sorting...
dots out of 10: ..........
Mesh file defined 3 physical entities:
entity_name = "\"Gamma01\""
Target entity "Gamma01" is 1 out of 3.
[ Info: sorting...
Mesh file defined 3 physical entities:
entity_name = "\"Gamma01\""
entity_name = "\"Gamma02\""
Target entity "Gamma02" is 2 out of 3.
[ Info: sorting...
Mesh file defined 3 physical entities:
entity_name = "\"Gamma01\""
entity_name = "\"Gamma02\""
entity_name = "\"Gamma12\""
Target entity "Gamma12" is 3 out of 3.
[ Info: sorting...
[ Info: sorting...
dots out of 10: ..........
dots out of 10: ...
dots out of 10: ..........
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length(fcs) = 48
length(sorted_fcs) = 48
Using 'refines' algorithm for local assembly:
dots out of 10: .........
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┌ Warning: Assignment to `v1` in soft scope is ambiguous because a global variable by the same name exists: `v1` will be treated as a new local. Disambiguate by using `local v1` to suppress this warning or `global v1` to assign to the existing global variable.
└ @ ~/.julia/packages/BEAST/rHcfL/test/test_wiltonints.jl:305
┌ Warning: Assignment to `v2` in soft scope is ambiguous because a global variable by the same name exists: `v2` will be treated as a new local. Disambiguate by using `local v2` to suppress this warning or `global v2` to assign to the existing global variable.
└ @ ~/.julia/packages/BEAST/rHcfL/test/test_wiltonints.jl:306
z_cv_se_3 = [-0.0004283919877941368 0.0 0.0003732239596071187; 0.0010338282104207488 -0.00041537328276586424 -5.920799275641622e-5; -0.00010079141577363941 0.0004537562889989528 -0.0008244347016914365]
z_cv_ss_3 = [-0.00042839202906197585 -8.056375676858416e-20 0.0003732239967818595; 0.0010338160355346368 -0.0004153733252706649 -5.9197106210080094e-5; -0.00010080550187596351 0.0004537563315037566 -0.0008244219319020421]
norm(z_ce_se_1 - z_ce_ss_1) = 7.027630551742224e-6
norm(z_ce_se_2 - z_ce_ss_2) = 5.291100097918913e-6
norm(z_ce_se_3 - z_ce_ss_3) = 9.696167639531824e-6
norm(z_ce_ss_3 - z_ce_ss_3_18) = 1.7150922072013558e-15
norm(out_ss - out_dw) / norm(out_dw) = 0.018634753473719654
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numcells(S1) = 32
numcells(S2) = 32
┌ Warning: Assignment to `ι` in soft scope is ambiguous because a global variable by the same name exists: `ι` will be treated as a new local. Disambiguate by using `local ι` to suppress this warning or `global ι` to assign to the existing global variable.
└ @ ~/.julia/packages/BEAST/rHcfL/test/test_tdassembly.jl:70
order = 4
┌ Warning: Assignment to `ι` in soft scope is ambiguous because a global variable by the same name exists: `ι` will be treated as a new local. Disambiguate by using `local ι` to suppress this warning or `global ι` to assign to the existing global variable.
└ @ ~/.julia/packages/BEAST/rHcfL/test/test_tdassembly.jl:77
length(fcs) = 6
length(sorted_fcs) = 6
Allocating memory for convolution operator: length(testels) = 1
length(trialels) = 1
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Allocated memory for convolution operator.
order = 4
length(testels) = 6
length(trialels) = 1
dots out of 10: ......
length(fcs) = 6
length(sorted_fcs) = 6
Allocating memory for convolution operator: length(testels) = 6
length(trialels) = 1
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Allocated memory for convolution operator.
[ Info: Starting assembly with 2 threads:
length(testels) = 6
length(testels) = 4
length(trialels) = 1
length(trialels) = 1
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.....
Allocating memory for convolution operator: length(testels) = 1
length(trialels) = 6
dots out of 10: .
Allocated memory for convolution operator.
length(testels) = 6
length(trialels) = 1
dots out of 10: ......
length(fcs) = 108
length(sorted_fcs) = 108
Allocating memory for convolution operator: length(testels) = 18
length(trialels) = 18
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Allocated memory for convolution operator.
size(Z) = (21, 21, 80)
Allocating memory for convolution operator: length(testels) = 18
length(trialels) = 18
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Allocated memory for convolution operator.
size(Z) = (21, 21, 80)
length(testels) = 18
length(trialels) = 18
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length(testels) = 18
length(trialels) = 18
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Allocating memory for convolution operator: length(testels) = 18
length(trialels) = 18
dots out of 10: .........
Allocated memory for convolution operator.
Allocating memory for convolution operator: length(testels) = 18
length(trialels) = 18
dots out of 10: .........
Allocated memory for convolution operator.
length(testels) = 18
length(trialels) = 18
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length(testels) = 18
length(trialels) = 18
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intinfenifheuifhi
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10[80] - 20[80] - 30[80] - 40[80] - 50[80] - 60[80] - 70[80] - 80[80] - Allocating memory for convolution operator: length(testels) = 2
length(trialels) = 2
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Allocated memory for convolution operator.
length(testels) = 2
length(trialels) = 2
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Allocating memory for convolution operator: length(testels) = 2
length(trialels) = 2
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Allocated memory for convolution operator.
length(testels) = 2
length(trialels) = 2
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[ Info: `Could not load BogaertInts10`. Related tests skipped.
Testing BEAST tests passed