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1.5.1-pre-0d71d8cd8b.log
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Julia Version 1.5.1-pre.28
Commit 0d71d8cd8b (2020-08-14 20:35 UTC)
Platform Info:
OS: Linux (x86_64-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
Installed NearestNeighbors ───────────── v0.4.6
Installed Parsers ────────────────────── v1.0.10
Installed GeoFormatTypes ─────────────── v0.3.0
Installed SpecialFunctions ───────────── v0.10.3
Installed QuadGK ─────────────────────── v2.4.0
Installed GeoArrays ──────────────────── v0.3.1
Installed StatsBase ──────────────────── v0.32.2
Installed UnicodePlots ───────────────── v1.2.0
Installed Libtiff_jll ────────────────── v4.1.0+0
Installed SQLite_jll ─────────────────── v3.32.3+0
Installed CompilerSupportLibraries_jll ─ v0.3.3+0
Installed PDMats ─────────────────────── v0.10.0
Installed CEnum ──────────────────────── v0.4.1
Installed GDAL_jll ───────────────────── v3.0.4+1
Installed ForwardDiff ────────────────── v0.10.12
Installed StaticArrays ───────────────── v0.12.4
Installed DataStreams ────────────────── v0.4.2
Installed LineSearches ───────────────── v7.0.1
Installed UnPack ─────────────────────── v1.0.2
Installed WeakRefStrings ─────────────── v0.6.2
Installed PROJ_jll ───────────────────── v7.0.1+0
Installed SortingAlgorithms ──────────── v0.3.1
Installed DataStructures ─────────────── v0.17.20
Installed ScientificTypes ────────────── v0.8.1
Installed DataValueInterfaces ────────── v1.0.0
Installed GDAL ───────────────────────── v1.1.3
Installed PositiveFactorizations ─────── v0.2.3
Installed MacroTools ─────────────────── v0.5.5
Installed OpenSpecFun_jll ────────────── v0.5.3+3
Installed LittleCMS_jll ──────────────── v2.9.0+0
Installed nghttp2_jll ────────────────── v1.40.0+2
Installed OpenJpeg_jll ───────────────── v2.3.1+0
Installed Requires ───────────────────── v1.0.1
Installed Zlib_jll ───────────────────── v1.2.11+15
Installed PooledArrays ───────────────── v0.5.3
Installed NLSolversBase ──────────────── v7.6.3
Installed Reexport ───────────────────── v0.2.0
Installed SentinelArrays ─────────────── v1.2.11
Installed Compat ─────────────────────── v3.13.0
Installed TableTraits ────────────────── v1.0.0
Installed InvertedIndices ────────────── v1.0.0
Installed Distances ──────────────────── v0.9.0
Installed DiffResults ────────────────── v1.0.2
Installed Distributions ──────────────── v0.23.8
Installed Tables ─────────────────────── v1.0.5
Installed IteratorInterfaceExtensions ── v1.0.0
Installed Missings ───────────────────── v0.4.3
Installed JSON ───────────────────────── v0.21.0
Installed CommonSubexpressions ───────── v0.3.0
Installed DensityRatioEstimation ─────── v0.4.2
Installed GeoStatsBase ───────────────── v0.10.4
Installed FillArrays ─────────────────── v0.8.14
Installed FiniteDiff ─────────────────── v2.5.2
Installed NaNMath ────────────────────── v0.3.4
Installed LibSSH2_jll ────────────────── v1.9.0+3
Installed DiffRules ──────────────────── v1.0.1
Installed LossFunctions ──────────────── v0.6.2
Installed DataFrames ─────────────────── v0.21.6
Installed GEOS_jll ───────────────────── v3.8.1+0
Installed ArchGDAL ───────────────────── v0.4.1
Installed CoordinateTransformations ──── v0.6.0
Installed AverageShiftedHistograms ───── v0.8.1
Installed LibCURL_jll ────────────────── v7.71.1+0
Installed OrderedCollections ─────────── v1.3.0
Installed RecipesBase ────────────────── v1.0.2
Installed libpng_jll ─────────────────── v1.6.37+4
Installed Zstd_jll ───────────────────── v1.4.5+0
Installed ArrayInterface ─────────────── v2.11.0
Installed StatsFuns ──────────────────── v0.9.5
Installed Rmath ──────────────────────── v0.6.1
Installed MLJModelInterface ──────────── v0.3.2
Installed CSV ────────────────────────── v0.7.7
Installed Parameters ─────────────────── v0.12.1
Installed CategoricalArrays ──────────── v0.8.1
Installed Optim ──────────────────────── v0.22.0
Installed Rmath_jll ──────────────────── v0.2.2+1
Installed DataAPI ────────────────────── v1.3.0
Installed GeoInterface ───────────────── v0.5.4
Installed MbedTLS_jll ────────────────── v2.16.6+1
Installed Crayons ────────────────────── v4.0.3
Installed JpegTurbo_jll ──────────────── v2.0.1+1
Installed Combinatorics ──────────────── v1.0.2
Installed LearnBase ──────────────────── v0.4.1
Updating `~/.julia/environments/v1.5/Project.toml`
[2fb1d81b] + GeoArrays v0.3.1
Updating `~/.julia/environments/v1.5/Manifest.toml`
[c9ce4bd3] + ArchGDAL v0.4.1
[4fba245c] + ArrayInterface v2.11.0
[77b51b56] + AverageShiftedHistograms v0.8.1
[fa961155] + CEnum v0.4.1
[336ed68f] + CSV v0.7.7
[324d7699] + CategoricalArrays v0.8.1
[861a8166] + Combinatorics v1.0.2
[bbf7d656] + CommonSubexpressions v0.3.0
[34da2185] + Compat v3.13.0
[e66e0078] + CompilerSupportLibraries_jll v0.3.3+0
[150eb455] + CoordinateTransformations v0.6.0
[a8cc5b0e] + Crayons v4.0.3
[9a962f9c] + DataAPI v1.3.0
[a93c6f00] + DataFrames v0.21.6
[9a8bc11e] + DataStreams v0.4.2
[864edb3b] + DataStructures v0.17.20
[e2d170a0] + DataValueInterfaces v1.0.0
[ab46fb84] + DensityRatioEstimation v0.4.2
[163ba53b] + DiffResults v1.0.2
[b552c78f] + DiffRules v1.0.1
[b4f34e82] + Distances v0.9.0
[31c24e10] + Distributions v0.23.8
[1a297f60] + FillArrays v0.8.14
[6a86dc24] + FiniteDiff v2.5.2
[f6369f11] + ForwardDiff v0.10.12
[add2ef01] + GDAL v1.1.3
[a7073274] + GDAL_jll v3.0.4+1
[d604d12d] + GEOS_jll v3.8.1+0
[2fb1d81b] + GeoArrays v0.3.1
[68eda718] + GeoFormatTypes v0.3.0
[cf35fbd7] + GeoInterface v0.5.4
[323cb8eb] + GeoStatsBase v0.10.4
[41ab1584] + InvertedIndices v1.0.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[682c06a0] + JSON v0.21.0
[aacddb02] + JpegTurbo_jll v2.0.1+1
[7f8f8fb0] + LearnBase v0.4.1
[deac9b47] + LibCURL_jll v7.71.1+0
[29816b5a] + LibSSH2_jll v1.9.0+3
[89763e89] + Libtiff_jll v4.1.0+0
[d3d80556] + LineSearches v7.0.1
[d3a379c0] + LittleCMS_jll v2.9.0+0
[30fc2ffe] + LossFunctions v0.6.2
[e80e1ace] + MLJModelInterface v0.3.2
[1914dd2f] + MacroTools v0.5.5
[c8ffd9c3] + MbedTLS_jll v2.16.6+1
[e1d29d7a] + Missings v0.4.3
[d41bc354] + NLSolversBase v7.6.3
[77ba4419] + NaNMath v0.3.4
[b8a86587] + NearestNeighbors v0.4.6
[643b3616] + OpenJpeg_jll v2.3.1+0
[efe28fd5] + OpenSpecFun_jll v0.5.3+3
[429524aa] + Optim v0.22.0
[bac558e1] + OrderedCollections v1.3.0
[90014a1f] + PDMats v0.10.0
[58948b4f] + PROJ_jll v7.0.1+0
[d96e819e] + Parameters v0.12.1
[69de0a69] + Parsers v1.0.10
[2dfb63ee] + PooledArrays v0.5.3
[85a6dd25] + PositiveFactorizations v0.2.3
[1fd47b50] + QuadGK v2.4.0
[3cdcf5f2] + RecipesBase v1.0.2
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v1.0.1
[79098fc4] + Rmath v0.6.1
[f50d1b31] + Rmath_jll v0.2.2+1
[76ed43ae] + SQLite_jll v3.32.3+0
[321657f4] + ScientificTypes v0.8.1
[91c51154] + SentinelArrays v1.2.11
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.10.3
[90137ffa] + StaticArrays v0.12.4
[2913bbd2] + StatsBase v0.32.2
[4c63d2b9] + StatsFuns v0.9.5
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v1.0.5
[3a884ed6] + UnPack v1.0.2
[b8865327] + UnicodePlots v1.2.0
[ea10d353] + WeakRefStrings v0.6.2
[83775a58] + Zlib_jll v1.2.11+15
[3161d3a3] + Zstd_jll v1.4.5+0
[b53b4c65] + libpng_jll v1.6.37+4
[8e850ede] + nghttp2_jll v1.40.0+2
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[4607b0f0] + SuiteSparse
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Testing GeoArrays
Status `/tmp/jl_allWFx/Project.toml`
[c9ce4bd3] ArchGDAL v0.4.1
[150eb455] CoordinateTransformations v0.6.0
[2fb1d81b] GeoArrays v0.3.1
[68eda718] GeoFormatTypes v0.3.0
[323cb8eb] GeoStatsBase v0.10.4
[d293930c] KrigingEstimators v0.3.10
[3cdcf5f2] RecipesBase v1.0.2
[90137ffa] StaticArrays v0.12.4
[8dfed614] Test
Status `/tmp/jl_allWFx/Manifest.toml`
[c9ce4bd3] ArchGDAL v0.4.1
[dce04be8] ArgCheck v2.1.0
[4fba245c] ArrayInterface v2.11.0
[77b51b56] AverageShiftedHistograms v0.8.1
[198e06fe] BangBang v0.3.29
[fa961155] CEnum v0.4.1
[336ed68f] CSV v0.7.7
[324d7699] CategoricalArrays v0.8.1
[861a8166] Combinatorics v1.0.2
[bbf7d656] CommonSubexpressions v0.3.0
[34da2185] Compat v3.13.0
[e66e0078] CompilerSupportLibraries_jll v0.3.3+0
[a33af91c] CompositionsBase v0.1.0
[187b0558] ConstructionBase v1.0.0
[150eb455] CoordinateTransformations v0.6.0
[a8cc5b0e] Crayons v4.0.3
[9a962f9c] DataAPI v1.3.0
[a93c6f00] DataFrames v0.21.6
[9a8bc11e] DataStreams v0.4.2
[864edb3b] DataStructures v0.17.20
[e2d170a0] DataValueInterfaces v1.0.0
[244e2a9f] DefineSingletons v0.1.0
[ab46fb84] DensityRatioEstimation v0.4.2
[163ba53b] DiffResults v1.0.2
[b552c78f] DiffRules v1.0.1
[b4f34e82] Distances v0.9.0
[31c24e10] Distributions v0.23.8
[1a297f60] FillArrays v0.8.14
[6a86dc24] FiniteDiff v2.5.2
[f6369f11] ForwardDiff v0.10.12
[add2ef01] GDAL v1.1.3
[a7073274] GDAL_jll v3.0.4+1
[d604d12d] GEOS_jll v3.8.1+0
[2fb1d81b] GeoArrays v0.3.1
[68eda718] GeoFormatTypes v0.3.0
[cf35fbd7] GeoInterface v0.5.4
[323cb8eb] GeoStatsBase v0.10.4
[22cec73e] InitialValues v0.2.9
[41ab1584] InvertedIndices v1.0.0
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.0
[aacddb02] JpegTurbo_jll v2.0.1+1
[d293930c] KrigingEstimators v0.3.10
[7f8f8fb0] LearnBase v0.4.1
[deac9b47] LibCURL_jll v7.71.1+0
[29816b5a] LibSSH2_jll v1.9.0+3
[89763e89] Libtiff_jll v4.1.0+0
[d3d80556] LineSearches v7.0.1
[d3a379c0] LittleCMS_jll v2.9.0+0
[30fc2ffe] LossFunctions v0.6.2
[e80e1ace] MLJModelInterface v0.3.2
[1914dd2f] MacroTools v0.5.5
[c8ffd9c3] MbedTLS_jll v2.16.6+1
[e1d29d7a] Missings v0.4.3
[d41bc354] NLSolversBase v7.6.3
[77ba4419] NaNMath v0.3.4
[b8a86587] NearestNeighbors v0.4.6
[643b3616] OpenJpeg_jll v2.3.1+0
[efe28fd5] OpenSpecFun_jll v0.5.3+3
[429524aa] Optim v0.22.0
[bac558e1] OrderedCollections v1.3.0
[90014a1f] PDMats v0.10.0
[58948b4f] PROJ_jll v7.0.1+0
[d96e819e] Parameters v0.12.1
[69de0a69] Parsers v1.0.10
[2dfb63ee] PooledArrays v0.5.3
[85a6dd25] PositiveFactorizations v0.2.3
[1fd47b50] QuadGK v2.4.0
[3cdcf5f2] RecipesBase v1.0.2
[189a3867] Reexport v0.2.0
[ae029012] Requires v1.0.1
[79098fc4] Rmath v0.6.1
[f50d1b31] Rmath_jll v0.2.2+1
[76ed43ae] SQLite_jll v3.32.3+0
[321657f4] ScientificTypes v0.8.1
[91c51154] SentinelArrays v1.2.11
[efcf1570] Setfield v0.7.0
[a2af1166] SortingAlgorithms v0.3.1
[276daf66] SpecialFunctions v0.10.3
[171d559e] SplittablesBase v0.1.10
[90137ffa] StaticArrays v0.12.4
[2913bbd2] StatsBase v0.32.2
[4c63d2b9] StatsFuns v0.9.5
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v1.0.5
[28d57a85] Transducers v0.4.47
[3a884ed6] UnPack v1.0.2
[b8865327] UnicodePlots v1.2.0
[04a0146e] Variography v0.7.0
[ea10d353] WeakRefStrings v0.6.2
[83775a58] Zlib_jll v1.2.11+15
[3161d3a3] Zstd_jll v1.4.5+0
[700de1a5] ZygoteRules v0.2.0
[b53b4c65] libpng_jll v1.6.37+4
[8e850ede] nghttp2_jll v1.40.0+2
[2a0f44e3] Base64
[ade2ca70] Dates
[8bb1440f] DelimitedFiles
[8ba89e20] Distributed
[9fa8497b] Future
[b77e0a4c] InteractiveUtils
[76f85450] LibGit2
[8f399da3] Libdl
[37e2e46d] LinearAlgebra
[56ddb016] Logging
[d6f4376e] Markdown
[a63ad114] Mmap
[44cfe95a] Pkg
[de0858da] Printf
[3fa0cd96] REPL
[9a3f8284] Random
[ea8e919c] SHA
[9e88b42a] Serialization
[1a1011a3] SharedArrays
[6462fe0b] Sockets
[2f01184e] SparseArrays
[10745b16] Statistics
[4607b0f0] SuiteSparse
[8dfed614] Test
[cf7118a7] UUIDs
[4ec0a83e] Unicode
┌ Warning: Casting Int64 to Int32 to fit in GDAL.
└ @ GeoArrays ~/.julia/packages/GeoArrays/gosWg/src/utils.jl:55
┌ Warning: Failed to get geotransform
└ @ GeoArrays ~/.julia/packages/GeoArrays/gosWg/src/geoutils.jl:8
┌ Warning: Failed to get geotransform
└ @ GeoArrays ~/.julia/packages/GeoArrays/gosWg/src/geoutils.jl:8
┌ Warning: Failed to get geotransform
└ @ GeoArrays ~/.julia/packages/GeoArrays/gosWg/src/geoutils.jl:8
┌ Warning: Failed to get geotransform
└ @ GeoArrays ~/.julia/packages/GeoArrays/gosWg/src/geoutils.jl:8
┌ Warning: Failed to get geotransform
└ @ GeoArrays ~/.julia/packages/GeoArrays/gosWg/src/geoutils.jl:8
Regular Grid interpolation: Test Failed at /home/pkgeval/.julia/packages/GeoArrays/gosWg/test/test_interpolate.jl:8
Expression: count(ismissing, ga) == 1
Evaluated: 0 == 1
Stacktrace:
[1] top-level scope at /home/pkgeval/.julia/packages/GeoArrays/gosWg/test/test_interpolate.jl:8
[2] top-level scope at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1115
[3] top-level scope at /home/pkgeval/.julia/packages/GeoArrays/gosWg/test/test_interpolate.jl:6
[4] top-level scope at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1115
[5] top-level scope at /home/pkgeval/.julia/packages/GeoArrays/gosWg/test/test_interpolate.jl:5
Regular Grid interpolation with negative spacing: Test Failed at /home/pkgeval/.julia/packages/GeoArrays/gosWg/test/test_interpolate.jl:15
Expression: count(ismissing, ga) == 1
Evaluated: 0 == 1
Stacktrace:
[1] top-level scope at /home/pkgeval/.julia/packages/GeoArrays/gosWg/test/test_interpolate.jl:15
[2] top-level scope at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1115
[3] top-level scope at /home/pkgeval/.julia/packages/GeoArrays/gosWg/test/test_interpolate.jl:13
[4] top-level scope at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1115
[5] top-level scope at /home/pkgeval/.julia/packages/GeoArrays/gosWg/test/test_interpolate.jl:5
Test Summary: | Pass Fail Total
GeoArrays | 226 2 228
GeoUtils | 8 8
Reading rasters | 3 3
coords | 5 5
GeoArray constructors | 181 181
Conversions | 1 1
Reading rasters | No tests
Writing rasters | No tests
Interpolating rasters | 3 2 5
Regular Grid interpolation | 1 1 2
Regular Grid interpolation with negative spacing | 1 1 2
Irregular Grid interpolation (not yet supported) | 1 1
CRS | 9 9
operations | 16 16
ERROR: LoadError: Some tests did not pass: 226 passed, 2 failed, 0 errored, 0 broken.
in expression starting at /home/pkgeval/.julia/packages/GeoArrays/gosWg/test/runtests.jl:4
CPLDestroyMutex: Error = 16 (Device or resource busy)
ERROR: Package GeoArrays errored during testing
Stacktrace:
[1] pkgerror(::String) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/Types.jl:52
[2] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/Operations.jl:1566
[3] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:328
[4] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:315
[5] #test#61 at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:67 [inlined]
[6] test at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:67 [inlined]
[7] #test#60 at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:66 [inlined]
[8] test at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:66 [inlined]
[9] test(::String; kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:65
[10] test(::String) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:65
[11] top-level scope at none:16