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1.5.1-pre-0d71d8cd8b.log
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1.5.1-pre-0d71d8cd8b.log
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Julia Version 1.5.1-pre.28
Commit 0d71d8cd8b (2020-08-14 20:35 UTC)
Platform Info:
OS: Linux (x86_64-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
Installed ProgressMeter ─ v0.9.0
Installed TSne ────────── v1.2.0
Installed Distances ───── v0.9.0
Updating `~/.julia/environments/v1.5/Project.toml`
[24678dba] + TSne v1.2.0
Updating `~/.julia/environments/v1.5/Manifest.toml`
[b4f34e82] + Distances v0.9.0
[92933f4c] + ProgressMeter v0.9.0
[24678dba] + TSne v1.2.0
[2a0f44e3] + Base64
[8ba89e20] + Distributed
[b77e0a4c] + InteractiveUtils
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[de0858da] + Printf
[9a3f8284] + Random
[9e88b42a] + Serialization
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[4ec0a83e] + Unicode
┌ Warning: using test/REQUIRE files is deprecated and current support is lacking in some areas
└ @ Pkg.Operations /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/Operations.jl:1463
Testing TSne
Status `/tmp/jl_UHxRfI/Project.toml`
[b4f34e82] Distances v0.9.0
[eb30cadb] MLDatasets v0.5.2
[92933f4c] ProgressMeter v0.9.0
[ce6b1742] RDatasets v0.6.10
[24678dba] TSne v1.2.0
[37e2e46d] LinearAlgebra
[de0858da] Printf
[9a3f8284] Random
[10745b16] Statistics
[8dfed614] Test
Status `/tmp/jl_UHxRfI/Manifest.toml`
[9e28174c] BinDeps v1.0.1
[a74b3585] Blosc v0.7.0
[0b7ba130] Blosc_jll v1.14.3+1
[e1450e63] BufferedStreams v1.0.0
[336ed68f] CSV v0.7.7
[324d7699] CategoricalArrays v0.8.1
[944b1d66] CodecZlib v0.7.0
[3da002f7] ColorTypes v0.10.8
[34da2185] Compat v3.13.0
[9a962f9c] DataAPI v1.3.0
[124859b0] DataDeps v0.7.2
[a93c6f00] DataFrames v0.21.6
[864edb3b] DataStructures v0.17.20
[e2d170a0] DataValueInterfaces v1.0.0
[b4f34e82] Distances v0.9.0
[e2ba6199] ExprTools v0.1.1
[8f5d6c58] EzXML v1.1.0
[5789e2e9] FileIO v1.4.1
[53c48c17] FixedPointNumbers v0.8.4
[92fee26a] GZip v0.5.1
[f67ccb44] HDF5 v0.13.4
[0234f1f7] HDF5_jll v1.10.5+5
[cd3eb016] HTTP v0.8.17
[83e8ac13] IniFile v0.5.0
[41ab1584] InvertedIndices v1.0.0
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.0
[94ce4f54] Libiconv_jll v1.16.0+5
[5ced341a] Lz4_jll v1.9.2+2
[23992714] MAT v0.8.0
[eb30cadb] MLDatasets v0.5.2
[739be429] MbedTLS v1.0.2
[c8ffd9c3] MbedTLS_jll v2.16.6+1
[e1d29d7a] Missings v0.4.3
[78c3b35d] Mocking v0.7.1
[bac558e1] OrderedCollections v1.3.0
[69de0a69] Parsers v1.0.10
[2dfb63ee] PooledArrays v0.5.3
[92933f4c] ProgressMeter v0.9.0
[df47a6cb] RData v0.7.2
[ce6b1742] RDatasets v0.6.10
[3cdcf5f2] RecipesBase v1.0.2
[189a3867] Reexport v0.2.0
[ae029012] Requires v1.0.1
[91c51154] SentinelArrays v1.2.11
[a2af1166] SortingAlgorithms v0.3.1
[24678dba] TSne v1.2.0
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v1.0.5
[f269a46b] TimeZones v1.3.2
[3bb67fe8] TranscodingStreams v0.9.5
[30578b45] URIParser v0.4.1
[02c8fc9c] XML2_jll v2.9.10+1
[83775a58] Zlib_jll v1.2.11+15
[3161d3a3] Zstd_jll v1.4.5+0
[2a0f44e3] Base64
[ade2ca70] Dates
[8bb1440f] DelimitedFiles
[8ba89e20] Distributed
[9fa8497b] Future
[b77e0a4c] InteractiveUtils
[76f85450] LibGit2
[8f399da3] Libdl
[37e2e46d] LinearAlgebra
[56ddb016] Logging
[d6f4376e] Markdown
[a63ad114] Mmap
[44cfe95a] Pkg
[de0858da] Printf
[3fa0cd96] REPL
[9a3f8284] Random
[ea8e919c] SHA
[9e88b42a] Serialization
[1a1011a3] SharedArrays
[6462fe0b] Sockets
[2f01184e] SparseArrays
[10745b16] Statistics
[8dfed614] Test
[cf7118a7] UUIDs
[4ec0a83e] Unicode
[ Info: Initial X shape is (150, 4)
[ Info: Starting with random layout...
[ Info: Computing pairwise distances...
┌ Warning: implicit `dims=2` argument now has to be passed explicitly to specify that distances between columns should be computed
│ caller = ip:0x0
└ @ Core :-1
[ Info: Mean σ=0.1908
Computing t-SNE 50%|██████████████████ | ETA: 0:00:00[K
KL_divergence: 2.4388 (warmup)[A
[K[AComputing t-SNE100%|████████████████████████████████████| Time: 0:00:00[K
KL_divergence: 3.6517 (warmup)
[ Info: Final t-SNE KL-divergence=3.6517
Computing t-SNE 20%|███████▎ | ETA: 0:00:00[K
KL_divergence: 2.4220 (warmup)[A
[K[AComputing t-SNE100%|████████████████████████████████████| Time: 0:00:00[K
KL_divergence: 2.9826 (warmup)
[ Info: Initial X shape is (150, 4)
[ Info: Starting with random layout...
[ Info: Computing pairwise distances...
[ Info: Mean σ=0.1908
[ Info: Final t-SNE KL-divergence=3.5627
Computing t-SNE 30%|██████████▊ | ETA: 0:00:00[K
KL_divergence: 2.4084 (warmup)[A
[K[AComputing t-SNE100%|████████████████████████████████████| Time: 0:00:00[K
KL_divergence: 2.9902 (warmup)
Computing point perplexities 2%|▌ | ETA: 0:00:05[KComputing point perplexities 4%|█ | ETA: 0:00:05[KComputing point perplexities 6%|█▍ | ETA: 0:00:05[KComputing point perplexities 8%|█▊ | ETA: 0:00:05[KComputing point perplexities 9%|██▏ | ETA: 0:00:05[KComputing point perplexities 11%|██▌ | ETA: 0:00:05[KComputing point perplexities 13%|██▉ | ETA: 0:00:05[KComputing point perplexities 15%|███▍ | ETA: 0:00:05[KComputing point perplexities 17%|████ | ETA: 0:00:04[KComputing point perplexities 19%|████▌ | ETA: 0:00:04[KComputing point perplexities 22%|█████ | ETA: 0:00:04[KComputing point perplexities 24%|█████▌ | ETA: 0:00:04[KComputing point perplexities 26%|██████ | ETA: 0:00:04[KComputing point perplexities 29%|██████▋ | ETA: 0:00:04[KComputing point perplexities 31%|███████▏ | ETA: 0:00:03[KComputing point perplexities 33%|███████▋ | ETA: 0:00:03[KComputing point perplexities 35%|████████▏ | ETA: 0:00:03[KComputing point perplexities 38%|████████▋ | ETA: 0:00:03[KComputing point perplexities 40%|█████████▏ | ETA: 0:00:03[KComputing point perplexities 42%|█████████▋ | ETA: 0:00:03[KComputing point perplexities 44%|██████████▏ | ETA: 0:00:03[KComputing point perplexities 46%|██████████▋ | ETA: 0:00:03[KComputing point perplexities 48%|███████████▏ | ETA: 0:00:03[KComputing point perplexities 50%|███████████▋ | ETA: 0:00:02[KComputing point perplexities 53%|████████████▏ | ETA: 0:00:02[KComputing point perplexities 55%|████████████▋ | ETA: 0:00:02[KComputing point perplexities 57%|█████████████▏ | ETA: 0:00:02[KComputing point perplexities 59%|█████████████▌ | ETA: 0:00:02[KComputing point perplexities 61%|██████████████ | ETA: 0:00:02[KComputing point perplexities 63%|██████████████▌ | ETA: 0:00:02[KComputing point perplexities 65%|██████████████▉ | ETA: 0:00:02[KComputing point perplexities 67%|███████████████▍ | ETA: 0:00:02[KComputing point perplexities 69%|███████████████▉ | ETA: 0:00:01[KComputing point perplexities 71%|████████████████▍ | ETA: 0:00:01[KComputing point perplexities 73%|████████████████▉ | ETA: 0:00:01[KComputing point perplexities 76%|█████████████████▍ | ETA: 0:00:01[KComputing point perplexities 78%|█████████████████▉ | ETA: 0:00:01[KComputing point perplexities 80%|██████████████████▍ | ETA: 0:00:01[KComputing point perplexities 82%|██████████████████▉ | ETA: 0:00:01[KComputing point perplexities 84%|███████████████████▍ | ETA: 0:00:01[KComputing point perplexities 86%|███████████████████▉ | ETA: 0:00:01[KComputing point perplexities 88%|████████████████████▍ | ETA: 0:00:01[KComputing point perplexities 91%|████████████████████▉ | ETA: 0:00:00[KComputing point perplexities 93%|█████████████████████▍ | ETA: 0:00:00[KComputing point perplexities 95%|█████████████████████▉ | ETA: 0:00:00[KComputing point perplexities 97%|██████████████████████▍| ETA: 0:00:00[KComputing point perplexities 99%|██████████████████████▉| ETA: 0:00:00[KComputing point perplexities100%|███████████████████████| Time: 0:00:05[K
Computing t-SNE 0%| | ETA: 0:21:08[K
KL_divergence: 0.2441 (warmup)[A
[K[AComputing t-SNE 0%| | ETA: 0:16:04[K
KL_divergence: 0.2441 (warmup)[A
[K[AComputing t-SNE 0%| | ETA: 0:14:29[K
KL_divergence: 0.2441 (warmup)[A
[K[AComputing t-SNE 0%|▏ | ETA: 0:13:19[K
KL_divergence: 0.2441 (warmup)[A
[K[AComputing t-SNE 0%|▏ | ETA: 0:12:31[K
KL_divergence: 0.2441 (warmup)[A
[K[AComputing t-SNE 0%|▏ | ETA: 0:11:52[K
KL_divergence: 0.2441 (warmup)[A
[K[AComputing t-SNE 0%|▏ | ETA: 0:11:27[K
KL_divergence: 0.2441 (warmup)[A
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KL_divergence: 0.2441 (warmup)[A
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KL_divergence: 0.2441 (warmup)[A
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KL_divergence: 0.2441 (warmup)[A
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KL_divergence: 0.2441 (warmup)[A
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KL_divergence: 0.2441 (warmup)[A
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KL_divergence: 0.2441 (warmup)[A
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KL_divergence: 0.2441 (warmup)[A
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KL_divergence: 0.2441 (warmup)[A
[K[AComputing t-SNE 1%|▎ | ETA: 0:09:30[K
KL_divergence: 0.2441 (warmup)[A
[K[AComputing t-SNE 1%|▎ | ETA: 0:09:33[K
KL_divergence: 0.2441 (warmup)[A
[K[AComputing t-SNE 1%|▍ | ETA: 0:09:34[K
KL_divergence: 0.2441 (warmup)[A
[K[AComputing t-SNE 1%|▍ | ETA: 0:09:39[K
KL_divergence: 0.2441 (warmup)[A
[K[AComputing t-SNE 1%|▍ | ETA: 0:09:37[K
KL_divergence: 0.2441 (warmup)[A
[K[AComputing t-SNE 1%|▍ | ETA: 0:09:30[K
KL_divergence: 0.2441 (warmup)[A
[K[AComputing t-SNE 1%|▍ | ETA: 0:09:23[K
KL_divergence: 0.2441 (warmup)[A
[K[AComputing t-SNE 1%|▍ | ETA: 0:09:21[K
KL_divergence: 0.2441 (warmup)[A
[K[AComputing t-SNE 1%|▍ | ETA: 0:09:19[K
KL_divergence: 0.2441 (warmup)[A
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KL_divergence: 0.0043[A
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[K[AComputing t-SNE 14%|█████▏ | ETA: 0:07:28[K
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KL_divergence: 0.0043[A
[K[AComputing t-SNE 14%|█████▏ | ETA: 0:07:28[K
KL_divergence: 0.0043[A
[K[AComputing t-SNE 14%|█████▏ | ETA: 0:07:28[K
KL_divergence: 0.0043[A
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KL_divergence: 0.0043[A
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KL_divergence: 0.0043[A
[K[AComputing t-SNE 15%|█████▎ | ETA: 0:07:27[K
KL_divergence: 0.0043[A
[K[AComputing t-SNE 15%|█████▎ | ETA: 0:07:27[K
KL_divergence: 0.0043[A
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KL_divergence: 0.0000[A
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[K[AComputing t-SNE 19%|██████▊ | ETA: 0:07:13[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 19%|██████▊ | ETA: 0:07:13[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 19%|██████▊ | ETA: 0:07:13[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 19%|██████▉ | ETA: 0:07:13[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 19%|██████▉ | ETA: 0:07:12[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 19%|██████▉ | ETA: 0:07:13[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 19%|██████▉ | ETA: 0:07:12[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 19%|██████▉ | ETA: 0:07:12[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 19%|██████▉ | ETA: 0:07:12[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 19%|██████▉ | ETA: 0:07:12[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 19%|███████ | ETA: 0:07:12[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 19%|███████ | ETA: 0:07:12[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 19%|███████ | ETA: 0:07:12[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 19%|███████ | ETA: 0:07:11[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████ | ETA: 0:07:11[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████ | ETA: 0:07:11[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████ | ETA: 0:07:11[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▏ | ETA: 0:07:10[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▏ | ETA: 0:07:10[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▏ | ETA: 0:07:10[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▏ | ETA: 0:07:10[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▏ | ETA: 0:07:09[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▏ | ETA: 0:07:09[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▏ | ETA: 0:07:09[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▎ | ETA: 0:07:09[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▎ | ETA: 0:07:08[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▎ | ETA: 0:07:08[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▎ | ETA: 0:07:07[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▎ | ETA: 0:07:06[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▎ | ETA: 0:07:06[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▎ | ETA: 0:07:06[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▍ | ETA: 0:07:05[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▍ | ETA: 0:07:05[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▍ | ETA: 0:07:04[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 20%|███████▍ | ETA: 0:07:04[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 21%|███████▍ | ETA: 0:07:03[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 21%|███████▍ | ETA: 0:07:03[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 21%|███████▍ | ETA: 0:07:02[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 21%|███████▌ | ETA: 0:07:01[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 21%|███████▌ | ETA: 0:07:01[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 21%|███████▌ | ETA: 0:07:01[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 21%|███████▌ | ETA: 0:07:00[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 21%|███████▌ | ETA: 0:07:00[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 21%|███████▌ | ETA: 0:06:59[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 21%|███████▌ | ETA: 0:06:59[K
KL_divergence: 0.0000[A
[K[AComputing t-SNE 21%|███████▋ | ETA: 0:06:58[K
KL_divergence: 0.0000[A