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1.6.0-DEV-f05b821fe7.log
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Julia Version 1.6.0-DEV.1218
Commit f05b821fe7 (2020-10-14 11:56 UTC)
Platform Info:
OS: Linux (x86_64-linux-gnu)
CPU: AMD EPYC 7502 32-Core Processor
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-11.0.0 (ORCJIT, znver2)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
JULIA_MAX_NUM_PRECOMPILE_FILES = 9223372036854775807
Resolving package versions...
Installed PDMats ─────────────────────── v0.10.1
Installed CompilerSupportLibraries_jll ─ v0.3.3+0
Installed InvertedIndices ────────────── v1.0.0
Installed StatsFuns ──────────────────── v0.9.5
Installed OrderedCollections ─────────── v1.3.1
Installed Tables ─────────────────────── v1.1.0
Installed DataFrames ─────────────────── v0.21.8
Installed JWAS ───────────────────────── v0.9.1
Installed DataAPI ────────────────────── v1.3.0
Installed Rmath_jll ──────────────────── v0.2.2+1
Installed OpenSpecFun_jll ────────────── v0.5.3+3
Installed QuadGK ─────────────────────── v2.4.1
Installed Compat ─────────────────────── v3.20.0
Installed Missings ───────────────────── v0.4.4
Installed SpecialFunctions ───────────── v0.10.3
Installed DataStructures ─────────────── v0.18.7
Installed IteratorInterfaceExtensions ── v1.0.0
Installed Parsers ────────────────────── v1.0.11
Installed Rmath ──────────────────────── v0.6.1
Installed FillArrays ─────────────────── v0.9.7
Installed TableTraits ────────────────── v1.0.0
Installed StaticArrays ───────────────── v0.12.4
Installed DataValueInterfaces ────────── v1.0.0
Installed StructTypes ────────────────── v1.1.0
Installed Reexport ───────────────────── v0.2.0
Installed PooledArrays ───────────────── v0.5.3
Installed SentinelArrays ─────────────── v1.2.16
Installed Distributions ──────────────── v0.24.0
Installed CategoricalArrays ──────────── v0.8.3
Installed SortingAlgorithms ──────────── v0.3.1
Installed JSON ───────────────────────── v0.21.1
Installed ProgressMeter ──────────────── v1.4.0
Installed StatsBase ──────────────────── v0.33.2
Installed CSV ────────────────────────── v0.7.7
Updating `~/.julia/environments/v1.6/Project.toml`
[c9a035f4] + JWAS v0.9.1
Updating `~/.julia/environments/v1.6/Manifest.toml`
[336ed68f] + CSV v0.7.7
[324d7699] + CategoricalArrays v0.8.3
[34da2185] + Compat v3.20.0
[e66e0078] + CompilerSupportLibraries_jll v0.3.3+0
[9a962f9c] + DataAPI v1.3.0
[a93c6f00] + DataFrames v0.21.8
[864edb3b] + DataStructures v0.18.7
[e2d170a0] + DataValueInterfaces v1.0.0
[31c24e10] + Distributions v0.24.0
[1a297f60] + FillArrays v0.9.7
[41ab1584] + InvertedIndices v1.0.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[682c06a0] + JSON v0.21.1
[c9a035f4] + JWAS v0.9.1
[e1d29d7a] + Missings v0.4.4
[efe28fd5] + OpenSpecFun_jll v0.5.3+3
[bac558e1] + OrderedCollections v1.3.1
[90014a1f] + PDMats v0.10.1
[69de0a69] + Parsers v1.0.11
[2dfb63ee] + PooledArrays v0.5.3
[92933f4c] + ProgressMeter v1.4.0
[1fd47b50] + QuadGK v2.4.1
[189a3867] + Reexport v0.2.0
[79098fc4] + Rmath v0.6.1
[f50d1b31] + Rmath_jll v0.2.2+1
[91c51154] + SentinelArrays v1.2.16
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.10.3
[90137ffa] + StaticArrays v0.12.4
[2913bbd2] + StatsBase v0.33.2
[4c63d2b9] + StatsFuns v0.9.5
[856f2bd8] + StructTypes v1.1.0
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v1.1.0
[56f22d72] + Artifacts
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[4607b0f0] + SuiteSparse
[fa267f1f] + TOML
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Precompiling project... (tip: to disable auto-precompilation set ENV["JULIA_PKG_PRECOMPILE_AUTO"]=0)
[90m[32m ✓ [39mIteratorInterfaceExtensions[39m
[90m[32m ✓ [39mDataAPI[39m
[90m[32m ✓ [39mDataValueInterfaces[39m
[90m[32m ✓ [39mReexport[39m
[90m[32m ✓ [39mInvertedIndices[39m
[90m[32m ✓ [39mOrderedCollections[39m
[90m[32m ✓ [39mTableTraits[39m
[90m[32m ✓ [39mStructTypes[39m
[90m[32m ✓ [39mProgressMeter[39m
[90m[32m ✓ [39mPDMats[39m
[90m[32m ✓ [39mMissings[39m
[90m[32m ✓ [39mCompat[39m
[90m[32m ✓ [39mPooledArrays[39m
[90m[32m ✓ [39mTables[39m
[90m[32m ✓ [39mFillArrays[39m
[90m[32m ✓ [39mSentinelArrays[39m
[90m[32m ✓ [39mRmath_jll[39m
[90m[32m ✓ [39mCompilerSupportLibraries_jll[39m
[90m[32m ✓ [39mRmath[39m
[90m[32m ✓ [39mOpenSpecFun_jll[39m
[90m[32m ✓ [39mDataStructures[39m
[90m[32m ✓ [39mParsers[39m
[90m[32m ✓ [39mSortingAlgorithms[39m
[90m[32m ✓ [39mJSON[39m
[90m[32m ✓ [39mQuadGK[39m
[90m[32m ✓ [39mStaticArrays[39m
[90m[32m ✓ [39mSpecialFunctions[39m
[90m[32m ✓ [39mCategoricalArrays[39m
[90m[32m ✓ [39mStatsBase[39m
[90m[32m ✓ [39mStatsFuns[39m
[90m[32m ✓ [39mDataFrames[39m
[90m[32m ✓ [39mDistributions[39m
[90m[32m ✓ [39mCSV[39m
[32m ✓ [39mJWAS
34 dependencies successfully precompiled
Testing JWAS
Status `/tmp/jl_vJHZ03/Project.toml`
[336ed68f] CSV v0.7.7
[a93c6f00] DataFrames v0.21.8
[31c24e10] Distributions v0.24.0
[c9a035f4] JWAS v0.9.1
[92933f4c] ProgressMeter v1.4.0
[2913bbd2] StatsBase v0.33.2
[8bb1440f] DelimitedFiles
[b77e0a4c] InteractiveUtils
[37e2e46d] LinearAlgebra
[de0858da] Printf
[9a3f8284] Random
[2f01184e] SparseArrays
[8dfed614] Test
Status `/tmp/jl_vJHZ03/Manifest.toml`
[336ed68f] CSV v0.7.7
[324d7699] CategoricalArrays v0.8.3
[34da2185] Compat v3.20.0
[e66e0078] CompilerSupportLibraries_jll v0.3.3+0
[9a962f9c] DataAPI v1.3.0
[a93c6f00] DataFrames v0.21.8
[864edb3b] DataStructures v0.18.7
[e2d170a0] DataValueInterfaces v1.0.0
[31c24e10] Distributions v0.24.0
[1a297f60] FillArrays v0.9.7
[41ab1584] InvertedIndices v1.0.0
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.1
[c9a035f4] JWAS v0.9.1
[e1d29d7a] Missings v0.4.4
[efe28fd5] OpenSpecFun_jll v0.5.3+3
[bac558e1] OrderedCollections v1.3.1
[90014a1f] PDMats v0.10.1
[69de0a69] Parsers v1.0.11
[2dfb63ee] PooledArrays v0.5.3
[92933f4c] ProgressMeter v1.4.0
[1fd47b50] QuadGK v2.4.1
[189a3867] Reexport v0.2.0
[79098fc4] Rmath v0.6.1
[f50d1b31] Rmath_jll v0.2.2+1
[91c51154] SentinelArrays v1.2.16
[a2af1166] SortingAlgorithms v0.3.1
[276daf66] SpecialFunctions v0.10.3
[90137ffa] StaticArrays v0.12.4
[2913bbd2] StatsBase v0.33.2
[4c63d2b9] StatsFuns v0.9.5
[856f2bd8] StructTypes v1.1.0
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v1.1.0
[56f22d72] Artifacts
[2a0f44e3] Base64
[ade2ca70] Dates
[8bb1440f] DelimitedFiles
[8ba89e20] Distributed
[9fa8497b] Future
[b77e0a4c] InteractiveUtils
[76f85450] LibGit2
[8f399da3] Libdl
[37e2e46d] LinearAlgebra
[56ddb016] Logging
[d6f4376e] Markdown
[a63ad114] Mmap
[44cfe95a] Pkg
[de0858da] Printf
[3fa0cd96] REPL
[9a3f8284] Random
[ea8e919c] SHA
[9e88b42a] Serialization
[1a1011a3] SharedArrays
[6462fe0b] Sockets
[2f01184e] SparseArrays
[10745b16] Statistics
[4607b0f0] SuiteSparse
[fa267f1f] TOML
[8dfed614] Test
[cf7118a7] UUIDs
[4ec0a83e] Unicode
Testing Running tests...
┌ Warning: `CSV.read(input; kw...)` is deprecated in favor of `using DataFrames; CSV.read(input, DataFrame; kw...)
│ caller = ip:0x0
└ @ Core :-1
ERROR: LoadError: LoadError: MethodError: no method matching typesubtract(::Type{Union{}}, ::Type{Int64})
Closest candidates are:
typesubtract(::Any, ::Any, !Matched::Int64) at compiler/typeutils.jl:66
Stacktrace:
[1] ts(T::Type, S::Type)
@ CSV ~/.julia/packages/CSV/MKemC/src/utils.jl:214
[2] nonstandardtype(T::Type)
@ CSV ~/.julia/packages/CSV/MKemC/src/utils.jl:217
[3] (::CSV.var"#17#23")(T::Type)
@ CSV ./none:0
[4] iterate(::Base.Iterators.Filter{CSV.var"#17#23", Vector{Type}})
@ Base.Iterators ./iterators.jl:451
[5] iterate
@ ./generator.jl:44 [inlined]
[6] Header
@ ~/.julia/packages/CSV/MKemC/src/header.jl:232 [inlined]
[7] CSV.File(source::String; header::Bool, normalizenames::Bool, datarow::Int64, skipto::Nothing, footerskip::Int64, transpose::Bool, comment::Nothing, use_mmap::Nothing, ignoreemptylines::Bool, select::Nothing, drop::Nothing, missingstrings::Vector{String}, missingstring::String, delim::Char, ignorerepeated::Bool, quotechar::Char, openquotechar::Nothing, closequotechar::Nothing, escapechar::Char, dateformat::Nothing, dateformats::Nothing, decimal::UInt8, truestrings::Vector{String}, falsestrings::Vector{String}, type::Nothing, types::Nothing, typemap::Dict{Type, Type}, categorical::Nothing, pool::Float64, lazystrings::Bool, strict::Bool, silencewarnings::Bool, debug::Bool, parsingdebug::Bool, kw::Base.Iterators.Pairs{Union{}, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ CSV ~/.julia/packages/CSV/MKemC/src/file.jl:216
[8] read(source::String, sink::Nothing; copycols::Bool, kwargs::Base.Iterators.Pairs{Symbol, Any, Tuple{Symbol, Symbol, Symbol}, NamedTuple{(:delim, :header, :missingstrings), Tuple{Char, Bool, Vector{String}}}})
@ CSV ~/.julia/packages/CSV/MKemC/src/CSV.jl:44
[9] top-level scope
@ ~/.julia/packages/JWAS/h7G1Q/test/test_BayesianAlphabet.jl:8
[10] include(fname::String)
@ Base.MainInclude ./client.jl:444
[11] top-level scope
@ ~/.julia/packages/JWAS/h7G1Q/test/runtests.jl:3
[12] include(fname::String)
@ Base.MainInclude ./client.jl:444
[13] top-level scope
@ none:6
in expression starting at /home/pkgeval/.julia/packages/JWAS/h7G1Q/test/test_BayesianAlphabet.jl:8
in expression starting at /home/pkgeval/.julia/packages/JWAS/h7G1Q/test/runtests.jl:3
ERROR: Package JWAS errored during testing
Stacktrace:
[1] pkgerror(msg::String)
@ Pkg.Types /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/Types.jl:52
[2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing)
@ Pkg.Operations /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/Operations.jl:1632
[3] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, kwargs::Base.Iterators.Pairs{Union{}, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ Pkg.API /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:333
[4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec})
@ Pkg.API /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:320
[5] #test#62
@ /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:70 [inlined]
[6] test
@ /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:69 [inlined]
[7] #test#61
@ /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:67 [inlined]
[8] test
@ /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:67 [inlined]
[9] test(pkg::String; kwargs::Base.Iterators.Pairs{Union{}, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ Pkg.API /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:66
[10] test(pkg::String)
@ Pkg.API /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:66
[11] top-level scope
@ none:31